RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 J3KRW8 73 aa17.21■□□□□ 0.35
TSEN54-201ENST00000333213 CD7P09564 240 aa17.21■□□□□ 0.35
TSEN54-201ENST00000333213 HNRNPA3P51991 378 aaKnown RBP17.21■□□□□ 0.35
TSEN54-201ENST00000333213 GOLT1BQ9Y3E0 138 aa17.21■□□□□ 0.35
TSEN54-201ENST00000333213 TRAV9-2A0A087WT02 112 aa17.21■□□□□ 0.35
TSEN54-201ENST00000333213 ZNF575Q86XF7 245 aa17.21■□□□□ 0.35
TSEN54-201ENST00000333213 DAZAP1Q96EP5 407 aaKnown RBP17.21■□□□□ 0.35
TSEN54-201ENST00000333213 CRXO43186 299 aaPredicted RBP17.2■□□□□ 0.34
TSEN54-201ENST00000333213 C9orf66Q5T8R8 295 aa17.2■□□□□ 0.34
TSEN54-201ENST00000333213 H3BMM0 161 aa17.19■□□□□ 0.34
TSEN54-201ENST00000333213 HLA-DRB4P13762 266 aa17.19■□□□□ 0.34
TSEN54-201ENST00000333213 CAMPP49913 170 aa17.19■□□□□ 0.34
TSEN54-201ENST00000333213 INSL3P51460 131 aa17.19■□□□□ 0.34
TSEN54-201ENST00000333213 FOXA3P55318 350 aaPredicted RBP17.19■□□□□ 0.34
TSEN54-201ENST00000333213 AMTNQ6UX39 209 aa17.19■□□□□ 0.34
TSEN54-201ENST00000333213 Q6ZN92 141 aa17.19■□□□□ 0.34
TSEN54-201ENST00000333213 C19orf73Q9NVV2 129 aa17.19■□□□□ 0.34
TSEN54-201ENST00000333213 LAMTOR2Q9Y2Q5 125 aa17.19■□□□□ 0.34
TSEN54-201ENST00000333213 HLA-DRB4X5D2U9 266 aa17.19■□□□□ 0.34
TSEN54-201ENST00000333213 RNASEKQ6P5S7 137 aaKnown RBP17.19■□□□□ 0.34
TSEN54-201ENST00000333213 TRBV7-9A0A0J9YWB2 115 aa17.18■□□□□ 0.34
TSEN54-201ENST00000333213 RBMY1BA6NDE4 496 aaKnown RBP17.18■□□□□ 0.34
TSEN54-201ENST00000333213 RBMY1EA6NEQ0 496 aaKnown RBP17.18■□□□□ 0.34
TSEN54-201ENST00000333213 RBMY1DP0C7P1 496 aaKnown RBP17.18■□□□□ 0.34
TSEN54-201ENST00000333213 GTSF1Q8WW33 167 aa17.18■□□□□ 0.34
TSEN54-201ENST00000333213 C11orf21Q9P2W6 132 aa17.18■□□□□ 0.34
TSEN54-201ENST00000333213 PKD1L1Q8TDX9 2849 aa17.18■□□□□ 0.34
TSEN54-201ENST00000333213 A8MTW9 85 aa17.17■□□□□ 0.34
TSEN54-201ENST00000333213 FABP5P3A8MUU1 101 aa17.17■□□□□ 0.34
TSEN54-201ENST00000333213 KLLNB2CW77 178 aa17.17■□□□□ 0.34
TSEN54-201ENST00000333213 IGLL1P15814 213 aa17.17■□□□□ 0.34
TSEN54-201ENST00000333213 SSBP4Q9BWG4 385 aaPredicted RBP17.17■□□□□ 0.34
TSEN54-201ENST00000333213 DUSP14O95147 198 aaKnown RBP17.17■□□□□ 0.34
TSEN54-201ENST00000333213 OR5AL1P0C617 328 aa17.17■□□□□ 0.34
TSEN54-201ENST00000333213 OR2D3Q8NGH3 330 aa17.17■□□□□ 0.34
TSEN54-201ENST00000333213 URB1-AS1Q96HZ7 61 aa17.17■□□□□ 0.34
TSEN54-201ENST00000333213 TMEM70Q9BUB7 260 aa17.17■□□□□ 0.34
TSEN54-201ENST00000333213 WFDC10AQ9H1F0 79 aa17.17■□□□□ 0.34
TSEN54-201ENST00000333213 OR11H12B2RN74 326 aa17.16■□□□□ 0.34
TSEN54-201ENST00000333213 GATD1Q8NB37 220 aa17.16■□□□□ 0.34
TSEN54-201ENST00000333213 ODF3Q96PU9 254 aa17.16■□□□□ 0.34
TSEN54-201ENST00000333213 TSPOP30536 169 aa17.15■□□□□ 0.34
TSEN54-201ENST00000333213 BATFQ16520 125 aa17.15■□□□□ 0.34
TSEN54-201ENST00000333213 SPINK13Q1W4C9 94 aa17.15■□□□□ 0.34
TSEN54-201ENST00000333213 IGKV3D-20A0A0C4DH25 116 aa17.14■□□□□ 0.33
TSEN54-201ENST00000333213 A0A1B0GW15 77 aa17.14■□□□□ 0.33
TSEN54-201ENST00000333213 RNASE4P34096 147 aaKnown RBP17.14■□□□□ 0.33
TSEN54-201ENST00000333213 MDFIQ99750 246 aa17.14■□□□□ 0.33
TSEN54-201ENST00000333213 TRAV12-2A0A075B6T6 113 aa17.13■□□□□ 0.33
TSEN54-201ENST00000333213 TMSB15BA0A087X1C1 80 aa17.13■□□□□ 0.33
TSEN54-201ENST00000333213 LOC102724200A0A096LPH7 203 aaPredicted RBP17.13■□□□□ 0.33
TSEN54-201ENST00000333213 PGLYRP4Q96LB8 373 aa17.13■□□□□ 0.33
TSEN54-201ENST00000333213 Q6AWC8 147 aa17.13■□□□□ 0.33
TSEN54-201ENST00000333213 FAM110AQ9BQ89 295 aa17.13■□□□□ 0.33
TSEN54-201ENST00000333213 MCRIP2Q9BUT9 160 aaKnown RBP17.13■□□□□ 0.33
TSEN54-201ENST00000333213 FXYD7P58549 80 aa17.12■□□□□ 0.33
TSEN54-201ENST00000333213 ST20Q9HBF5 79 aa17.12■□□□□ 0.33
TSEN54-201ENST00000333213 TMEM189A5PLL7 270 aa17.11■□□□□ 0.33
TSEN54-201ENST00000333213 WIPF1O43516 503 aa17.11■□□□□ 0.33
TSEN54-201ENST00000333213 ORM1P02763 201 aa17.11■□□□□ 0.33
TSEN54-201ENST00000333213 CDKN1BP46527 198 aa17.11■□□□□ 0.33
TSEN54-201ENST00000333213 ORAOV1Q8WV07 137 aa17.11■□□□□ 0.33
TSEN54-201ENST00000333213 NPSP0C0P6 89 aa17.11■□□□□ 0.33
TSEN54-201ENST00000333213 LINC01559Q495D7 138 aa17.11■□□□□ 0.33
TSEN54-201ENST00000333213 LEPP41159 167 aa17.1■□□□□ 0.33
TSEN54-201ENST00000333213 STPG4Q8N801 248 aa17.1■□□□□ 0.33
TSEN54-201ENST00000333213 TRAV21A0A0B4J279 112 aa17.09■□□□□ 0.33
TSEN54-201ENST00000333213 IGHV1-24A0A0C4DH33 117 aa17.09■□□□□ 0.33
TSEN54-201ENST00000333213 TRPT1Q86TN4 253 aaKnown RBP17.09■□□□□ 0.33
TSEN54-201ENST00000333213 TRAV12-3A0A0B4J271 114 aa17.09■□□□□ 0.33
TSEN54-201ENST00000333213 SYS1-DBNDD2H3BUS1 97 aa17.09■□□□□ 0.33
TSEN54-201ENST00000333213 CMC4P56277 68 aaPredicted RBP17.09■□□□□ 0.33
TSEN54-201ENST00000333213 LEPROTL1O95214 131 aa17.08■□□□□ 0.33
TSEN54-201ENST00000333213 RIGQ13278 110 aa17.08■□□□□ 0.33
TSEN54-201ENST00000333213 PET117Q6UWS5 81 aa17.08■□□□□ 0.33
TSEN54-201ENST00000333213 STHQ8IWL8 128 aa17.08■□□□□ 0.33
TSEN54-201ENST00000333213 ATOH7Q8N100 152 aa17.08■□□□□ 0.33
TSEN54-201ENST00000333213 CLUHP3Q96NS8 147 aa17.08■□□□□ 0.33
TSEN54-201ENST00000333213 A0A1B0GUT8 65 aa17.08■□□□□ 0.32
TSEN54-201ENST00000333213 C7orf71A4D174 169 aa17.08■□□□□ 0.32
TSEN54-201ENST00000333213 RBMY1A1P0DJD3 496 aaKnown RBP17.08■□□□□ 0.32
TSEN54-201ENST00000333213 RBMY1CP0DJD4 496 aa17.08■□□□□ 0.32
TSEN54-201ENST00000333213 RBMY1FQ15415 496 aaKnown RBP17.08■□□□□ 0.32
TSEN54-201ENST00000333213 OXLD1Q5BKU9 147 aa17.08■□□□□ 0.32
TSEN54-201ENST00000333213 MUC21Q5SSG8 566 aa17.07■□□□□ 0.32
TSEN54-201ENST00000333213 TMEM191AQ9H0A3 160 aa17.07■□□□□ 0.32
TSEN54-201ENST00000333213 MAJINQ3KP22 176 aa17.06■□□□□ 0.32
TSEN54-201ENST00000333213 DEFB125Q8N687 156 aa17.06■□□□□ 0.32
TSEN54-201ENST00000333213 HSPB8Q9UJY1 196 aa17.06■□□□□ 0.32
TSEN54-201ENST00000333213 ANXA2RQ3ZCQ2 193 aa17.06■□□□□ 0.32
TSEN54-201ENST00000333213 SPATA12Q7Z6I5 190 aa17.04■□□□□ 0.32
TSEN54-201ENST00000333213 IGLC6P0CF74 106 aa17.04■□□□□ 0.32
TSEN54-201ENST00000333213 MAP1LC3CQ9BXW4 147 aa17.04■□□□□ 0.32
TSEN54-201ENST00000333213 RPS20P60866 119 aaKnown RBP17.03■□□□□ 0.32
TSEN54-201ENST00000333213 GTSCR1Q86UQ5 136 aa17.03■□□□□ 0.32
TSEN54-201ENST00000333213 Q8N1Y9 231 aa17.03■□□□□ 0.32
TSEN54-201ENST00000333213 ZNF493Q6ZR52 646 aa17.02■□□□□ 0.32
TSEN54-201ENST00000333213 TPPP3Q9BW30 176 aa17.02■□□□□ 0.32
TSEN54-201ENST00000333213 GNRH2O43555 120 aa17.02■□□□□ 0.31
TSEN54-201ENST00000333213 GIG44P09565 113 aaPredicted RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms