RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 MYMXA0A1B0GTQ4 84 aa10.05□□□□□ -0.8
VSTM4-202ENST00000332853 UBE2V1Q13404 147 aa10.05□□□□□ -0.8
VSTM4-202ENST00000332853 LINC00574Q9H8X3 128 aa10.05□□□□□ -0.8
VSTM4-202ENST00000332853 COX8AP10176 69 aa10.04□□□□□ -0.8
VSTM4-202ENST00000332853 ZNF124Q15973 351 aa10.04□□□□□ -0.8
VSTM4-202ENST00000332853 TRBV25-1A0A075B6N4 114 aa10.04□□□□□ -0.8
VSTM4-202ENST00000332853 LMO4P61968 165 aa10.04□□□□□ -0.8
VSTM4-202ENST00000332853 TDRG1Q3Y452 100 aa10.04□□□□□ -0.8
VSTM4-202ENST00000332853 U3KQE9 123 aa10.04□□□□□ -0.8
VSTM4-202ENST00000332853 ZNF747Q9BV97 191 aa10.04□□□□□ -0.8
VSTM4-202ENST00000332853 SS18Q15532 418 aa10.04□□□□□ -0.8
VSTM4-202ENST00000332853 MTURNQ8N3F0 131 aa10.03□□□□□ -0.8
VSTM4-202ENST00000332853 C10orf126Q8N4M7 172 aa10.03□□□□□ -0.8
VSTM4-202ENST00000332853 ODF3BA8MYP8 253 aa10.03□□□□□ -0.8
VSTM4-202ENST00000332853 UBE2DNLQ8IWF7 75 aa10.03□□□□□ -0.8
VSTM4-202ENST00000332853 CLPSL2Q6UWE3 100 aa10.03□□□□□ -0.8
VSTM4-202ENST00000332853 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.02□□□□□ -0.81
VSTM4-202ENST00000332853 IGKV2-29A2NJV5 120 aaPredicted RBP10.02□□□□□ -0.81
VSTM4-202ENST00000332853 SLC25A20O43772 301 aa10.02□□□□□ -0.81
VSTM4-202ENST00000332853 SPINK8P0C7L1 97 aa10.02□□□□□ -0.81
VSTM4-202ENST00000332853 C20orf78Q9BR46 151 aa10.02□□□□□ -0.81
VSTM4-202ENST00000332853 ATG2AQ2TAZ0 1938 aa10.02□□□□□ -0.81
VSTM4-202ENST00000332853 TRAV8-4A0A0B4J246 113 aa10.02□□□□□ -0.81
VSTM4-202ENST00000332853 K7ERJ3 54 aa10.02□□□□□ -0.81
VSTM4-202ENST00000332853 PTPRQQ9UMZ3 2332 aa10.02□□□□□ -0.81
VSTM4-202ENST00000332853 F8VRH5 84 aa10.01□□□□□ -0.81
VSTM4-202ENST00000332853 MRPL52Q86TS9 123 aaKnown RBP10.01□□□□□ -0.81
VSTM4-202ENST00000332853 KLF12Q9Y4X4 402 aa10.01□□□□□ -0.81
VSTM4-202ENST00000332853 SUMO4Q6EEV6 95 aa10.01□□□□□ -0.81
VSTM4-202ENST00000332853 DLX4Q92988 240 aaPredicted RBP10.01□□□□□ -0.81
VSTM4-202ENST00000332853 LEPROTO15243 131 aa10.01□□□□□ -0.81
VSTM4-202ENST00000332853 IGHG2P01859 326 aa10.01□□□□□ -0.81
VSTM4-202ENST00000332853 CCDC140Q96MF4 163 aa10.01□□□□□ -0.81
VSTM4-202ENST00000332853 TMEM243Q9BU79 118 aa10.01□□□□□ -0.81
VSTM4-202ENST00000332853 TRAV8-3A0A0A6YYJ7 113 aa10.01□□□□□ -0.81
VSTM4-202ENST00000332853 PFN2P35080 140 aa10.01□□□□□ -0.81
VSTM4-202ENST00000332853 CDSNQ15517 529 aa10.01□□□□□ -0.81
VSTM4-202ENST00000332853 ATXN8Q156A1 80 aa10.01□□□□□ -0.81
VSTM4-202ENST00000332853 ANKHD1Q8IWZ3 2542 aaKnown RBP10□□□□□ -0.81
VSTM4-202ENST00000332853 CST9LQ9H4G1 147 aa10□□□□□ -0.81
VSTM4-202ENST00000332853 JPT2Q9H910 190 aa10□□□□□ -0.81
VSTM4-202ENST00000332853 LINC00322Q6ZN03 302 aaPredicted RBP10□□□□□ -0.81
VSTM4-202ENST00000332853 Q6ZVH6 145 aa10□□□□□ -0.81
VSTM4-202ENST00000332853 LENEPQ9Y5L5 61 aa10□□□□□ -0.81
VSTM4-202ENST00000332853 CREBBPQ92793 2442 aa10□□□□□ -0.81
VSTM4-202ENST00000332853 SPG11Q96JI7 2443 aa10□□□□□ -0.81
VSTM4-202ENST00000332853 C2orf70A6NJV1 201 aa10□□□□□ -0.81
VSTM4-202ENST00000332853 PCP2Q8IVA1 136 aa10□□□□□ -0.81
VSTM4-202ENST00000332853 A6NDX4 124 aa10□□□□□ -0.81
VSTM4-202ENST00000332853 PRSS29PA6NIE9 313 aa10□□□□□ -0.81
VSTM4-202ENST00000332853 CPAMD8Q8IZJ3 1885 aa9.99□□□□□ -0.81
VSTM4-202ENST00000332853 A0A0J9YY99 117 aa9.99□□□□□ -0.81
VSTM4-202ENST00000332853 BVES-AS1Q5T3Y7 98 aa9.99□□□□□ -0.81
VSTM4-202ENST00000332853 CUL9Q8IWT3 2517 aa9.99□□□□□ -0.81
VSTM4-202ENST00000332853 NPSP0C0P6 89 aa9.99□□□□□ -0.81
VSTM4-202ENST00000332853 COA6Q5JTJ3 125 aaKnown RBP9.99□□□□□ -0.81
VSTM4-202ENST00000332853 ADAMTSL5Q6ZMM2 481 aa9.99□□□□□ -0.81
VSTM4-202ENST00000332853 PIEZO2Q9H5I5 2752 aa9.99□□□□□ -0.81
VSTM4-202ENST00000332853 DSCAMO60469 2012 aa9.99□□□□□ -0.81
VSTM4-202ENST00000332853 HCFC1P51610 2035 aa9.98□□□□□ -0.81
VSTM4-202ENST00000332853 C2orf82Q6UX34 121 aa9.98□□□□□ -0.81
VSTM4-202ENST00000332853 C9orf47Q6ZRZ4 202 aa9.98□□□□□ -0.81
VSTM4-202ENST00000332853 Q8N1Y9 231 aa9.98□□□□□ -0.81
VSTM4-202ENST00000332853 APOC4P55056 127 aa9.98□□□□□ -0.81
VSTM4-202ENST00000332853 HIST2H2BDQ6DRA6 164 aa9.98□□□□□ -0.81
VSTM4-202ENST00000332853 NACAE9PAV3 2078 aa9.98□□□□□ -0.81
VSTM4-202ENST00000332853 C9JAW5 83 aa9.98□□□□□ -0.81
VSTM4-202ENST00000332853 ZNF493Q6ZR52 646 aa9.98□□□□□ -0.81
VSTM4-202ENST00000332853 CEND1Q8N111 149 aa9.98□□□□□ -0.81
VSTM4-202ENST00000332853 HIST2H2BCQ6DN03 193 aa9.97□□□□□ -0.81
VSTM4-202ENST00000332853 IGLV2-8P01709 118 aa9.97□□□□□ -0.81
VSTM4-202ENST00000332853 CRYGBP07316 175 aa9.97□□□□□ -0.81
VSTM4-202ENST00000332853 C11orf71Q6IPW1 123 aa9.97□□□□□ -0.81
VSTM4-202ENST00000332853 NDUFA12Q9UI09 145 aa9.97□□□□□ -0.81
VSTM4-202ENST00000332853 TNCP24821 2201 aa9.97□□□□□ -0.81
VSTM4-202ENST00000332853 ZNF80P51504 273 aaPredicted RBP9.97□□□□□ -0.81
VSTM4-202ENST00000332853 C9orf118A6NHY6 69 aa9.97□□□□□ -0.81
VSTM4-202ENST00000332853 SIGMAR1Q99720 223 aa9.96□□□□□ -0.81
VSTM4-202ENST00000332853 COL5A1P20908 1838 aaPredicted RBP9.96□□□□□ -0.81
VSTM4-202ENST00000332853 PLXNB1O43157 2135 aa9.96□□□□□ -0.82
VSTM4-202ENST00000332853 C19orf71A6NCJ1 209 aa9.96□□□□□ -0.82
VSTM4-202ENST00000332853 LY6LH3BQJ8 138 aa9.96□□□□□ -0.82
VSTM4-202ENST00000332853 J3QQQ9 107 aa9.96□□□□□ -0.82
VSTM4-202ENST00000332853 NXPH4O95158 308 aa9.95□□□□□ -0.82
VSTM4-202ENST00000332853 SPAG8Q99932 426 aaPredicted RBP9.95□□□□□ -0.82
VSTM4-202ENST00000332853 K7EMI3 77 aa9.95□□□□□ -0.82
VSTM4-202ENST00000332853 GPHB5Q86YW7 130 aa9.95□□□□□ -0.82
VSTM4-202ENST00000332853 PSCAO43653 123 aa9.95□□□□□ -0.82
VSTM4-202ENST00000332853 CITED2Q99967 270 aaPredicted RBP9.95□□□□□ -0.82
VSTM4-202ENST00000332853 RPL39P62891 51 aaKnown RBP9.94□□□□□ -0.82
VSTM4-202ENST00000332853 MRAPQ8TCY5 172 aa9.94□□□□□ -0.82
VSTM4-202ENST00000332853 Q6ZQT7 251 aa9.94□□□□□ -0.82
VSTM4-202ENST00000332853 ZNF48Q96MX3 618 aaPredicted RBP9.94□□□□□ -0.82
VSTM4-202ENST00000332853 ANKRD39Q53RE8 183 aa9.94□□□□□ -0.82
VSTM4-202ENST00000332853 KIR2DL5BA0A0G2JN68 375 aa9.93□□□□□ -0.82
VSTM4-202ENST00000332853 KIR2DL5BA0A0G2JPC4 375 aa9.93□□□□□ -0.82
VSTM4-202ENST00000332853 SRSF2Q01130 221 aaKnown RBP9.93□□□□□ -0.82
VSTM4-202ENST00000332853 KIR2DL5AQ8N109 375 aa9.93□□□□□ -0.82
VSTM4-202ENST00000332853 MDFICQ9P1T7 246 aa9.93□□□□□ -0.82
VSTM4-202ENST00000332853 ARHGAP32A7KAX9 2087 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms