RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PRR20EP86478 221 aa12.98□□□□□ -0.33
PTCH1-201ENST00000331920 PRR20CP86479 221 aa12.98□□□□□ -0.33
PTCH1-201ENST00000331920 PRR20DP86480 221 aa12.98□□□□□ -0.33
PTCH1-201ENST00000331920 PRR20BP86481 221 aa12.98□□□□□ -0.33
PTCH1-201ENST00000331920 PRR20AP86496 221 aa12.98□□□□□ -0.33
PTCH1-201ENST00000331920 Q6ZVH6 145 aa12.98□□□□□ -0.33
PTCH1-201ENST00000331920 FOXI1Q12951 378 aa12.98□□□□□ -0.33
PTCH1-201ENST00000331920 LHFPL1Q86WI0 220 aa12.98□□□□□ -0.33
PTCH1-201ENST00000331920 TPSG1Q9NRR2 321 aa12.97□□□□□ -0.33
PTCH1-201ENST00000331920 ELANEP08246 267 aa12.97□□□□□ -0.33
PTCH1-201ENST00000331920 DUX4L9Q6RFH8 374 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-201ENST00000331920 TRPM3Q9HCF6 1732 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-201ENST00000331920 B9D2Q9BPU9 175 aa12.97□□□□□ -0.33
PTCH1-201ENST00000331920 WI2-2373I1.2A0A1W2PRP0 233 aa12.96□□□□□ -0.33
PTCH1-201ENST00000331920 K7EQD1 137 aa12.96□□□□□ -0.33
PTCH1-201ENST00000331920 REG4Q9BYZ8 158 aa12.96□□□□□ -0.33
PTCH1-201ENST00000331920 PCDH15Q96QU1 1955 aa12.96□□□□□ -0.33
PTCH1-201ENST00000331920 YPEL3P61236 119 aaPredicted RBP12.96□□□□□ -0.33
PTCH1-201ENST00000331920 NDUFA4L2Q9NRX3 87 aa12.96□□□□□ -0.33
PTCH1-201ENST00000331920 WFDC10BQ8IUB3 73 aa12.96□□□□□ -0.33
PTCH1-201ENST00000331920 LMO1P25800 156 aa12.96□□□□□ -0.34
PTCH1-201ENST00000331920 C20orf144Q9BQM9 153 aa12.96□□□□□ -0.34
PTCH1-201ENST00000331920 IGKV1-6A0A0C4DH72 117 aa12.96□□□□□ -0.34
PTCH1-201ENST00000331920 H3BRN7 92 aa12.96□□□□□ -0.34
PTCH1-201ENST00000331920 J3QRE1 110 aa12.96□□□□□ -0.34
PTCH1-201ENST00000331920 SLURP1P55000 103 aa12.96□□□□□ -0.34
PTCH1-201ENST00000331920 CLEC2BQ92478 149 aa12.96□□□□□ -0.34
PTCH1-201ENST00000331920 NCOR1P1Q9H4R4 102 aa12.96□□□□□ -0.34
PTCH1-201ENST00000331920 SRSF2Q01130 221 aaKnown RBP12.95□□□□□ -0.34
PTCH1-201ENST00000331920 ATP6V0E2Q8NHE4 81 aa12.95□□□□□ -0.34
PTCH1-201ENST00000331920 CSRP1P21291 193 aaKnown RBP12.95□□□□□ -0.34
PTCH1-201ENST00000331920 V9GYV3 84 aa12.95□□□□□ -0.34
PTCH1-201ENST00000331920 SIPA1L3O60292 1781 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-201ENST00000331920 IGKV2-24A0A0C4DH68 120 aa12.95□□□□□ -0.34
PTCH1-201ENST00000331920 PRR15LQ9BU68 103 aa12.95□□□□□ -0.34
PTCH1-201ENST00000331920 SCN10AQ9Y5Y9 1956 aa12.94□□□□□ -0.34
PTCH1-201ENST00000331920 ADCYAP1P18509 176 aa12.94□□□□□ -0.34
PTCH1-201ENST00000331920 IGHV4-30-2A0A087WSY4 118 aa12.94□□□□□ -0.34
PTCH1-201ENST00000331920 C20orf78Q9BR46 151 aa12.94□□□□□ -0.34
PTCH1-201ENST00000331920 CD59P13987 128 aa12.94□□□□□ -0.34
PTCH1-201ENST00000331920 FOXI2Q6ZQN5 318 aa12.94□□□□□ -0.34
PTCH1-201ENST00000331920 SPART-AS1P0CW21 52 aa12.94□□□□□ -0.34
PTCH1-201ENST00000331920 TRBV10-2A0A0K0K1G8 114 aa12.94□□□□□ -0.34
PTCH1-201ENST00000331920 IGLV3-12A0A075B6K2 115 aa12.93□□□□□ -0.34
PTCH1-201ENST00000331920 WISP1O95388 367 aa12.93□□□□□ -0.34
PTCH1-201ENST00000331920 PNRC2Q9NPJ4 139 aaKnown RBP12.93□□□□□ -0.34
PTCH1-201ENST00000331920 IGLV3-32A0A0A0MS00 114 aa12.93□□□□□ -0.34
PTCH1-201ENST00000331920 LECT2O14960 151 aa12.93□□□□□ -0.34
PTCH1-201ENST00000331920 IGHV4-30-4P0DP06 118 aa12.93□□□□□ -0.34
PTCH1-201ENST00000331920 IGHV4-31P0DP07 118 aa12.93□□□□□ -0.34
PTCH1-201ENST00000331920 GATA1P15976 413 aaPredicted RBP12.93□□□□□ -0.34
PTCH1-201ENST00000331920 GP9P14770 177 aa12.93□□□□□ -0.34
PTCH1-201ENST00000331920 PRR4Q16378 134 aa12.93□□□□□ -0.34
PTCH1-201ENST00000331920 LINC01620Q4KN68 170 aa12.93□□□□□ -0.34
PTCH1-201ENST00000331920 C9orf66Q5T8R8 295 aa12.93□□□□□ -0.34
PTCH1-201ENST00000331920 NDUFA1O15239 70 aa12.93□□□□□ -0.34
PTCH1-201ENST00000331920 DIRC1Q969H9 104 aa12.93□□□□□ -0.34
PTCH1-201ENST00000331920 HHLA3Q9XRX5 114 aa12.92□□□□□ -0.34
PTCH1-201ENST00000331920 FRMPD3Q5JV73 1810 aa12.92□□□□□ -0.34
PTCH1-201ENST00000331920 LGALS9O00182 355 aa12.92□□□□□ -0.34
PTCH1-201ENST00000331920 UPK3BQ9BT76 320 aa12.92□□□□□ -0.34
PTCH1-201ENST00000331920 PYGO2Q9BRQ0 406 aa12.92□□□□□ -0.34
PTCH1-201ENST00000331920 C16orf74Q96GX8 76 aa12.92□□□□□ -0.34
PTCH1-201ENST00000331920 FAM231DQ6ZW35 169 aa12.92□□□□□ -0.34
PTCH1-201ENST00000331920 ADAMTS7Q9UKP4 1686 aa12.91□□□□□ -0.34
PTCH1-201ENST00000331920 DAZ2Q13117 558 aaKnown RBP12.91□□□□□ -0.34
PTCH1-201ENST00000331920 DAZ4Q86SG3 579 aaKnown RBP12.91□□□□□ -0.34
PTCH1-201ENST00000331920 DAZ3Q9NR90 486 aaKnown RBP12.91□□□□□ -0.34
PTCH1-201ENST00000331920 ZNF833PQ6ZTB9 187 aa12.91□□□□□ -0.34
PTCH1-201ENST00000331920 H0YGX0 51 aa12.9□□□□□ -0.34
PTCH1-201ENST00000331920 A4D1N5 150 aa12.9□□□□□ -0.34
PTCH1-201ENST00000331920 C9JQL5 133 aa12.9□□□□□ -0.34
PTCH1-201ENST00000331920 MST1P26927 711 aa12.9□□□□□ -0.34
PTCH1-201ENST00000331920 H3BQ85 93 aa12.89□□□□□ -0.35
PTCH1-201ENST00000331920 SIVA1O15304 175 aa12.89□□□□□ -0.35
PTCH1-201ENST00000331920 TMEM256-PLSCR3K7ERE1 68 aa12.89□□□□□ -0.35
PTCH1-201ENST00000331920 LYL1P12980 280 aa12.89□□□□□ -0.35
PTCH1-201ENST00000331920 SCXQ7RTU7 201 aa12.89□□□□□ -0.35
PTCH1-201ENST00000331920 PRRC2AP48634 2157 aaKnown RBP12.89□□□□□ -0.35
PTCH1-201ENST00000331920 TEX49A0A1B0GTD5 131 aa12.89□□□□□ -0.35
PTCH1-201ENST00000331920 KLK12Q9UKR0 248 aa12.89□□□□□ -0.35
PTCH1-201ENST00000331920 KLK5Q9Y337 293 aaPredicted RBP12.89□□□□□ -0.35
PTCH1-201ENST00000331920 DIAPH2-AS1Q14236 149 aa12.88□□□□□ -0.35
PTCH1-201ENST00000331920 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
PTCH1-201ENST00000331920 HRCT1Q6UXD1 115 aa12.88□□□□□ -0.35
PTCH1-201ENST00000331920 ZNF491Q8N8L2 437 aa12.88□□□□□ -0.35
PTCH1-201ENST00000331920 HIGD2AQ9BW72 106 aa12.87□□□□□ -0.35
PTCH1-201ENST00000331920 FXYD5Q96DB9 178 aa12.87□□□□□ -0.35
PTCH1-201ENST00000331920 C11orf52Q96A22 123 aa12.87□□□□□ -0.35
PTCH1-201ENST00000331920 HOXB4P17483 251 aaPredicted RBP12.87□□□□□ -0.35
PTCH1-201ENST00000331920 NBASA2RRP1 2371 aa12.86□□□□□ -0.35
PTCH1-201ENST00000331920 BPY2O14599 106 aa12.86□□□□□ -0.35
PTCH1-201ENST00000331920 TRBV6-6A0A0A6YYG2 114 aa12.86□□□□□ -0.35
PTCH1-201ENST00000331920 FGF23Q9GZV9 251 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-201ENST00000331920 J3QLI3 93 aa12.85□□□□□ -0.35
PTCH1-201ENST00000331920 ATP5G1P05496 136 aa12.85□□□□□ -0.35
PTCH1-201ENST00000331920 RPL39P62891 51 aaKnown RBP12.85□□□□□ -0.35
PTCH1-201ENST00000331920 DEFB112Q30KQ8 113 aa12.85□□□□□ -0.35
PTCH1-201ENST00000331920 C17orf58Q2M2W7 97 aa12.85□□□□□ -0.35
PTCH1-201ENST00000331920 DEFB135Q30KP9 77 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms