RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 C11orf86A6NJI1 115 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 H7C2G1 150 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 CFDP00746 253 aaPredicted RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 C1QAP02745 245 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 ISG15P05161 165 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 SRP19P09132 144 aaKnown RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 TRGC1P0CF51 173 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 SMIM6P0DI80 62 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 HIST1H1EP10412 219 aaKnown RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 OGNP20774 298 aaKnown RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 S100A1P23297 94 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 GRPRP30550 384 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 HSPA9P38646 679 aaKnown RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 CAPZBP47756 277 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 FOXA3P55318 350 aaPredicted RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 TSPEAR-AS2P59090 65 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 HERVK_113P63121 156 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 SMAGPQ0VAQ4 97 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 TMEM267Q0VDI3 215 aaPredicted RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 MLLT11Q13015 90 aaPredicted RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 RTL8BQ17RB0 113 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 WHAMMP3Q1A5X7 153 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 FAM201AQ5SY85 155 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 LCN8Q6JVE9 175 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 TRAPPC6BQ86SZ2 158 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 TAC4Q86UU9 113 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 UBL4BQ8N7F7 174 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 MAL2Q969L2 176 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 DIRAS2Q96HU8 199 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 TRABDQ9H4I3 376 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 C11orf1Q9H5F2 150 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 PRTFDC1Q9NRG1 225 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 SLC39A9Q9NUM3 307 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 COA4Q9NYJ1 87 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 PRO2289Q9P1D8 64 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 VPS29Q9UBQ0 182 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 BOKQ9UMX3 212 aaPredicted RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 POLEQ07864 2286 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 TRAV3A0A0B4J244 114 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 PROSCO94903 275 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 TNNC2P02585 160 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 COX6A1P12074 109 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 IFNGR2P38484 337 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 RPL30P62888 115 aaKnown RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 HPCAP84074 193 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 SLC38A11Q08AI6 406 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 NNATQ16517 81 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 XAF1Q6GPH4 301 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 SBSNQ6UWP8 590 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 SLC22A24Q8N4F4 322 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 OR8D4Q8NGM9 314 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 OR9Q1Q8NGQ5 310 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 ZNF563Q8TA94 476 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 PYDC1Q8WXC3 89 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 KCTD7Q96MP8 289 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 YPEL2Q96QA6 119 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 HSPB9Q9BQS6 159 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 CCDC90BQ9GZT6 254 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 C16orf95Q9H693 158 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 FAIMQ9NVQ4 179 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 STOML2Q9UJZ1 356 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 LY96Q9Y6Y9 160 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 IGKV1-9A0A0C4DH69 117 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 MCRIP1C9JLW8 97 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 ZNF705DP0CH99 300 aaPredicted RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 SULT1A3P0DMM9 295 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 SULT1A4P0DMN0 295 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 CGB3P0DN86 165 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 CGB7P0DN87 165 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 CXCL8P10145 99 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 HIST1H1TP22492 207 aaPredicted RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 S100A4P26447 101 aaKnown RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 RBM11P57052 281 aaKnown RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 LINC00313P59037 77 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 COPZ1P61923 177 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 MOGQ16653 247 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 LRRC75BQ2VPJ9 315 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 ACOT6Q3I5F7 207 aaPredicted RBP0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 SPANXN3Q5MJ09 141 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 SPATA12Q7Z6I5 190 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 NAA40Q86UY6 237 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 TRAPPC5Q8IUR0 188 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 SLC30A7Q8NEW0 376 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 OR10D3Q8NH80 312 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 C10orf105Q8TEF2 133 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 EEF1AKMT1Q8WVE0 214 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 TSPAN32Q96QS1 320 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 NMNAT3Q96T66 252 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 AIF1LQ9BQI0 150 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 TMEM191AQ9H0A3 160 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 AGPAT4-IT1Q9H0P7 198 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 COMMD3Q9UBI1 195 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 MINOS1-NBL1R4GNA1 71 aa0.45□□□□□ -2.34
CCDC144A-201ENST00000328495 SMIM31A0A1B0GVY4 71 aa0.44□□□□□ -2.34
CCDC144A-201ENST00000328495 OR6C6A6NF89 314 aa0.44□□□□□ -2.34
CCDC144A-201ENST00000328495 GGT3PA6NGU5 568 aa0.44□□□□□ -2.34
CCDC144A-201ENST00000328495 ODF3BA8MYP8 253 aa0.44□□□□□ -2.34
CCDC144A-201ENST00000328495 GGCTO75223 188 aaKnown RBP0.44□□□□□ -2.34
CCDC144A-201ENST00000328495 IGHV3-33P01772 117 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms