RNA–Protein interactions for RNA: ENST00000327359.7

BRF1-201, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-201ENST00000327359 TEN1Q86WV5 123 aa12.23□□□□□ -0.45
BRF1-201ENST00000327359 SIRPDQ9H106 197 aa12.23□□□□□ -0.45
BRF1-201ENST00000327359 GAGE12JA6NER3 117 aa12.23□□□□□ -0.45
BRF1-201ENST00000327359 GAGE7O76087 117 aa12.23□□□□□ -0.45
BRF1-201ENST00000327359 GAGE12FP0CL80 117 aa12.23□□□□□ -0.45
BRF1-201ENST00000327359 GAGE12GP0CL81 117 aa12.23□□□□□ -0.45
BRF1-201ENST00000327359 GAGE12IP0CL82 117 aa12.23□□□□□ -0.45
BRF1-201ENST00000327359 GAGE4Q13068 117 aa12.23□□□□□ -0.45
BRF1-201ENST00000327359 SVEP1Q4LDE5 3571 aa12.23□□□□□ -0.45
BRF1-201ENST00000327359 COL12A1Q99715 3063 aa12.23□□□□□ -0.45
BRF1-201ENST00000327359 RHODO00212 210 aa12.22□□□□□ -0.45
BRF1-201ENST00000327359 RBAKDNA6NC62 111 aa12.22□□□□□ -0.45
BRF1-201ENST00000327359 TMEM262E9PQX1 116 aa12.22□□□□□ -0.45
BRF1-201ENST00000327359 ZNF688P0C7X2 276 aa12.22□□□□□ -0.45
BRF1-201ENST00000327359 SPANXN1Q5VSR9 72 aa12.22□□□□□ -0.45
BRF1-201ENST00000327359 SFTA2Q6UW10 78 aa12.22□□□□□ -0.45
BRF1-201ENST00000327359 SMIM2Q9BVW6 85 aa12.22□□□□□ -0.45
BRF1-201ENST00000327359 CLEC3BP05452 202 aa12.21□□□□□ -0.45
BRF1-201ENST00000327359 TMEM78Q5T7P6 136 aa12.21□□□□□ -0.45
BRF1-201ENST00000327359 CCL19Q99731 98 aa12.21□□□□□ -0.45
BRF1-201ENST00000327359 LINC01549A6NIU2 74 aa12.21□□□□□ -0.46
BRF1-201ENST00000327359 BUB3O43684 328 aa12.21□□□□□ -0.46
BRF1-201ENST00000327359 NEXN-AS1Q8NBZ9 246 aa12.21□□□□□ -0.46
BRF1-201ENST00000327359 SCGB3A1Q96QR1 104 aa12.21□□□□□ -0.46
BRF1-201ENST00000327359 IGHV3OR16-13A0A075B7E8 117 aa12.2□□□□□ -0.46
BRF1-201ENST00000327359 IGHV3-74A0A0B4J1X5 117 aa12.2□□□□□ -0.46
BRF1-201ENST00000327359 ZFAND3Q9H8U3 227 aa12.2□□□□□ -0.46
BRF1-201ENST00000327359 SPANXA1Q9NS26 97 aa12.2□□□□□ -0.46
BRF1-201ENST00000327359 HIF1ANQ9NWT6 349 aa12.2□□□□□ -0.46
BRF1-201ENST00000327359 H3BVH4 76 aa12.2□□□□□ -0.46
BRF1-201ENST00000327359 NDUFV3P56181 108 aaKnown RBP12.2□□□□□ -0.46
BRF1-201ENST00000327359 SBSPONQ8IVN8 264 aa12.2□□□□□ -0.46
BRF1-201ENST00000327359 TOMM6Q96B49 74 aa12.2□□□□□ -0.46
BRF1-201ENST00000327359 PLEKHB2Q96CS7 222 aa12.2□□□□□ -0.46
BRF1-201ENST00000327359 PRADC1Q9BSG0 188 aa12.2□□□□□ -0.46
BRF1-201ENST00000327359 SCGB2A1O75556 95 aa12.19□□□□□ -0.46
BRF1-201ENST00000327359 PSMB2P49721 201 aa12.19□□□□□ -0.46
BRF1-201ENST00000327359 ZFP2Q6ZN57 461 aa12.19□□□□□ -0.46
BRF1-201ENST00000327359 IGHV4-4A0A075B6R2 117 aa12.18□□□□□ -0.46
BRF1-201ENST00000327359 IGHV3OR16-10A0A075B7F0 116 aa12.18□□□□□ -0.46
BRF1-201ENST00000327359 TRAV8-2A0A0B4J237 113 aa12.18□□□□□ -0.46
BRF1-201ENST00000327359 MINOS1Q5TGZ0 78 aa12.18□□□□□ -0.46
BRF1-201ENST00000327359 PTH2Q96A98 100 aa12.18□□□□□ -0.46
BRF1-201ENST00000327359 MINOS1-NBL1R4GNA1 71 aa12.18□□□□□ -0.46
BRF1-201ENST00000327359 LOC107984156A0A0G2JMH3 177 aa12.18□□□□□ -0.46
BRF1-201ENST00000327359 CENPVL3A0A0U1RRI6 287 aa12.18□□□□□ -0.46
BRF1-201ENST00000327359 ZNF815PA8K554 130 aa12.18□□□□□ -0.46
BRF1-201ENST00000327359 SPRY2O43597 315 aa12.18□□□□□ -0.46
BRF1-201ENST00000327359 ARL17AQ8IVW1 177 aa12.18□□□□□ -0.46
BRF1-201ENST00000327359 BAALCQ8WXS3 180 aa12.18□□□□□ -0.46
BRF1-201ENST00000327359 BBC3Q96PG8 261 aaPredicted RBP12.18□□□□□ -0.46
BRF1-201ENST00000327359 SLC50A1Q9BRV3 221 aa12.18□□□□□ -0.46
BRF1-201ENST00000327359 LINC01548A6NM66 108 aa12.17□□□□□ -0.46
BRF1-201ENST00000327359 CCDC179H3BU77 68 aa12.17□□□□□ -0.46
BRF1-201ENST00000327359 SAA4P35542 130 aa12.17□□□□□ -0.46
BRF1-201ENST00000327359 UBE2D1P51668 147 aa12.17□□□□□ -0.46
BRF1-201ENST00000327359 ORMDL2Q53FV1 153 aa12.17□□□□□ -0.46
BRF1-201ENST00000327359 IGHV3-49A0A0A0MS15 119 aa12.17□□□□□ -0.46
BRF1-201ENST00000327359 CLPSL1A2RUU4 121 aa12.17□□□□□ -0.46
BRF1-201ENST00000327359 UBE2E1P51965 193 aa12.17□□□□□ -0.46
BRF1-201ENST00000327359 UBE2D3P61077 147 aa12.17□□□□□ -0.46
BRF1-201ENST00000327359 UBE2D2P62837 147 aa12.17□□□□□ -0.46
BRF1-201ENST00000327359 PRR9Q5T870 116 aa12.17□□□□□ -0.46
BRF1-201ENST00000327359 NRGNQ92686 78 aa12.17□□□□□ -0.46
BRF1-201ENST00000327359 RPL39LQ96EH5 51 aaKnown RBP12.17□□□□□ -0.46
BRF1-201ENST00000327359 IGHV4-61A0A0C4DH41 118 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 ARL3P36405 182 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 SUMO2P61956 95 aaKnown RBP12.16□□□□□ -0.46
BRF1-201ENST00000327359 C15orf32Q32M92 178 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 SCGB1D4Q6XE38 83 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 RASL10AQ92737 203 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 FLNCQ14315 2725 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 SPG11Q96JI7 2443 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 ZFYVE26Q68DK2 2539 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 USP24Q9UPU5 2620 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 IGHV7-81A0A0B4J1V7 117 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 OOSP1A8MZH6 123 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 COX6B1P14854 86 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 SLC25A16P16260 332 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 ATP5J2P56134 94 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 LYRM7Q5U5X0 104 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 PIMREGQ9BSJ6 248 aa12.16□□□□□ -0.46
BRF1-201ENST00000327359 USP9XQ93008 2570 aaPredicted RBP12.15□□□□□ -0.46
BRF1-201ENST00000327359 GAGE2BQ13066 116 aa12.15□□□□□ -0.46
BRF1-201ENST00000327359 SRSF9Q13242 221 aaKnown RBP eCLIP12.15□□□□□ -0.46
BRF1-201ENST00000327359 GAGE2EQ4V326 116 aa12.15□□□□□ -0.46
BRF1-201ENST00000327359 Q6Q795 121 aa12.15□□□□□ -0.46
BRF1-201ENST00000327359 Q8N6K4 173 aa12.15□□□□□ -0.46
BRF1-201ENST00000327359 AJUBAQ96IF1 538 aa12.15□□□□□ -0.46
BRF1-201ENST00000327359 GAGE2DQ9UEU5 116 aa12.15□□□□□ -0.46
BRF1-201ENST00000327359 ASIPP42127 132 aa12.14□□□□□ -0.47
BRF1-201ENST00000327359 C2orf66Q6UXQ4 117 aa12.14□□□□□ -0.47
BRF1-201ENST00000327359 KLHL30-AS1Q8NEE0 82 aa12.14□□□□□ -0.47
BRF1-201ENST00000327359 RNF223E7ERA6 249 aa12.14□□□□□ -0.47
BRF1-201ENST00000327359 CD7P09564 240 aa12.14□□□□□ -0.47
BRF1-201ENST00000327359 A8MWV9 139 aa12.13□□□□□ -0.47
BRF1-201ENST00000327359 J3KRW8 73 aa12.13□□□□□ -0.47
BRF1-201ENST00000327359 M0R381 172 aa12.13□□□□□ -0.47
BRF1-201ENST00000327359 IFITM1P13164 125 aa12.13□□□□□ -0.47
BRF1-201ENST00000327359 C9orf47Q6ZRZ4 202 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms