RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 C16orf54Q6UWD8 224 aa10.02□□□□□ -0.81
LIN28A-202ENST00000326279 ESM1Q9NQ30 184 aa10.02□□□□□ -0.81
LIN28A-202ENST00000326279 GCSHP23434 173 aa10.01□□□□□ -0.81
LIN28A-202ENST00000326279 SAMD13Q5VXD3 122 aa10.01□□□□□ -0.81
LIN28A-202ENST00000326279 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.01□□□□□ -0.81
LIN28A-202ENST00000326279 TMEM158Q8WZ71 300 aa10.01□□□□□ -0.81
LIN28A-202ENST00000326279 HIVEP1P15822 2718 aa10.01□□□□□ -0.81
LIN28A-202ENST00000326279 IGHV3-16A0A0C4DH30 117 aa10.01□□□□□ -0.81
LIN28A-202ENST00000326279 ST20Q9HBF5 79 aa10.01□□□□□ -0.81
LIN28A-202ENST00000326279 FAM231BA6NCW3 169 aa10.01□□□□□ -0.81
LIN28A-202ENST00000326279 PRB2P02812 416 aaPredicted RBP10.01□□□□□ -0.81
LIN28A-202ENST00000326279 KIR3DS1Q14943 382 aa10.01□□□□□ -0.81
LIN28A-202ENST00000326279 CHCHD1Q96BP2 118 aaKnown RBP10.01□□□□□ -0.81
LIN28A-202ENST00000326279 NXT2Q9NPJ8 142 aaKnown RBP10.01□□□□□ -0.81
LIN28A-202ENST00000326279 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10□□□□□ -0.81
LIN28A-202ENST00000326279 TDRG1Q3Y452 100 aa10□□□□□ -0.81
LIN28A-202ENST00000326279 SMAD5-AS1Q9Y6J3 95 aa10□□□□□ -0.81
LIN28A-202ENST00000326279 TRGV1A0A0A0MS02 117 aa10□□□□□ -0.81
LIN28A-202ENST00000326279 POLR3KQ9Y2Y1 108 aaPredicted RBP10□□□□□ -0.81
LIN28A-202ENST00000326279 IGKV3D-20A0A0C4DH25 116 aa10□□□□□ -0.81
LIN28A-202ENST00000326279 MAJINQ3KP22 176 aa10□□□□□ -0.81
LIN28A-202ENST00000326279 LINC00173Q6ZV60 143 aa10□□□□□ -0.81
LIN28A-202ENST00000326279 OR2K2Q8NGT1 345 aa10□□□□□ -0.81
LIN28A-202ENST00000326279 H3BUA1 57 aa9.99□□□□□ -0.81
LIN28A-202ENST00000326279 DEFB4AO15263 64 aa9.99□□□□□ -0.81
LIN28A-202ENST00000326279 TRAV9-2A0A087WT02 112 aa9.99□□□□□ -0.81
LIN28A-202ENST00000326279 SYS1-DBNDD2H3BUS1 97 aa9.99□□□□□ -0.81
LIN28A-202ENST00000326279 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
LIN28A-202ENST00000326279 STPG4Q8N801 248 aa9.99□□□□□ -0.81
LIN28A-202ENST00000326279 DPH3P1Q9H4G8 78 aa9.99□□□□□ -0.81
LIN28A-202ENST00000326279 ZFAND3Q9H8U3 227 aa9.99□□□□□ -0.81
LIN28A-202ENST00000326279 CDKN1BP46527 198 aa9.99□□□□□ -0.81
LIN28A-202ENST00000326279 MBD6Q96DN6 1003 aa9.99□□□□□ -0.81
LIN28A-202ENST00000326279 NDUFAF3Q9BU61 184 aa9.99□□□□□ -0.81
LIN28A-202ENST00000326279 CSTL1Q9H114 145 aa9.99□□□□□ -0.81
LIN28A-202ENST00000326279 SIGLEC8Q9NYZ4 499 aa9.99□□□□□ -0.81
LIN28A-202ENST00000326279 NPIPB6E9PJ23 425 aa9.98□□□□□ -0.81
LIN28A-202ENST00000326279 IGHV1-24A0A0C4DH33 117 aa9.98□□□□□ -0.81
LIN28A-202ENST00000326279 AMMECR1LQ6DCA0 310 aa9.98□□□□□ -0.81
LIN28A-202ENST00000326279 MIEN1Q9BRT3 115 aa9.98□□□□□ -0.81
LIN28A-202ENST00000326279 MLST8Q9BVC4 326 aa9.98□□□□□ -0.81
LIN28A-202ENST00000326279 COL5A1-AS1Q5SY13 56 aa9.98□□□□□ -0.81
LIN28A-202ENST00000326279 PHLDA1Q8WV24 401 aaPredicted RBP9.98□□□□□ -0.81
LIN28A-202ENST00000326279 CRIP1P50238 77 aa9.98□□□□□ -0.81
LIN28A-202ENST00000326279 YPEL4Q96NS1 127 aa9.98□□□□□ -0.81
LIN28A-202ENST00000326279 WFDC10AQ9H1F0 79 aa9.98□□□□□ -0.81
LIN28A-202ENST00000326279 IGHV3-64A0A075B6Q5 118 aa9.97□□□□□ -0.81
LIN28A-202ENST00000326279 ATP5LO75964 103 aa9.97□□□□□ -0.81
LIN28A-202ENST00000326279 PRSS2P07478 247 aa9.97□□□□□ -0.81
LIN28A-202ENST00000326279 C19orf71A6NCJ1 209 aa9.97□□□□□ -0.81
LIN28A-202ENST00000326279 PRM2P04554 102 aa9.97□□□□□ -0.81
LIN28A-202ENST00000326279 Q6ZQT7 251 aa9.97□□□□□ -0.81
LIN28A-202ENST00000326279 F8W735 103 aaPredicted RBP9.96□□□□□ -0.81
LIN28A-202ENST00000326279 HERVK_113P61574 105 aa9.96□□□□□ -0.81
LIN28A-202ENST00000326279 LAGE3Q14657 143 aa9.96□□□□□ -0.81
LIN28A-202ENST00000326279 Q1RN00 199 aa9.96□□□□□ -0.81
LIN28A-202ENST00000326279 HILS1P60008 231 aa9.96□□□□□ -0.82
LIN28A-202ENST00000326279 TRGV11A0A075B6L2 103 aa9.96□□□□□ -0.82
LIN28A-202ENST00000326279 PSMB8P28062 276 aa9.96□□□□□ -0.82
LIN28A-202ENST00000326279 MYCNOSP40205 109 aa9.96□□□□□ -0.82
LIN28A-202ENST00000326279 C20orf173Q96LM9 149 aa9.96□□□□□ -0.82
LIN28A-202ENST00000326279 FBN2P35556 2912 aa9.95□□□□□ -0.82
LIN28A-202ENST00000326279 IGHV1OR15-1A0A075B7D0 117 aa9.95□□□□□ -0.82
LIN28A-202ENST00000326279 OR4C5Q8NGB2 326 aa9.95□□□□□ -0.82
LIN28A-202ENST00000326279 H7C1H1 209 aa9.95□□□□□ -0.82
LIN28A-202ENST00000326279 H7C2G1 150 aa9.95□□□□□ -0.82
LIN28A-202ENST00000326279 RNF151Q2KHN1 245 aa9.95□□□□□ -0.82
LIN28A-202ENST00000326279 PET117Q6UWS5 81 aa9.95□□□□□ -0.82
LIN28A-202ENST00000326279 ARL6IP6Q8N6S5 226 aa9.95□□□□□ -0.82
LIN28A-202ENST00000326279 OR11H2Q8NH07 326 aa9.95□□□□□ -0.82
LIN28A-202ENST00000326279 LAMTOR2Q9Y2Q5 125 aa9.95□□□□□ -0.82
LIN28A-202ENST00000326279 NDUFS6O75380 124 aaKnown RBP9.94□□□□□ -0.82
LIN28A-202ENST00000326279 SVEP1Q4LDE5 3571 aa9.94□□□□□ -0.82
LIN28A-202ENST00000326279 TMEM262E9PQX1 116 aa9.94□□□□□ -0.82
LIN28A-202ENST00000326279 COA6Q5JTJ3 125 aaKnown RBP9.94□□□□□ -0.82
LIN28A-202ENST00000326279 HIST1H4GQ99525 98 aa9.94□□□□□ -0.82
LIN28A-202ENST00000326279 JPT2Q9H910 190 aa9.94□□□□□ -0.82
LIN28A-202ENST00000326279 CYSLTR1Q9Y271 337 aa9.94□□□□□ -0.82
LIN28A-202ENST00000326279 IGLV2-11P01706 119 aa9.94□□□□□ -0.82
LIN28A-202ENST00000326279 DNLZQ5SXM8 178 aa9.94□□□□□ -0.82
LIN28A-202ENST00000326279 GPHB5Q86YW7 130 aa9.94□□□□□ -0.82
LIN28A-202ENST00000326279 LINC00482Q8N8I6 264 aa9.94□□□□□ -0.82
LIN28A-202ENST00000326279 PPP1R17O96001 155 aa9.93□□□□□ -0.82
LIN28A-202ENST00000326279 IGHV3-38A0A0C4DH36 116 aa9.93□□□□□ -0.82
LIN28A-202ENST00000326279 UBE2L6O14933 153 aa9.93□□□□□ -0.82
LIN28A-202ENST00000326279 DEFB125Q8N687 156 aa9.93□□□□□ -0.82
LIN28A-202ENST00000326279 NBEAL2Q6ZNJ1 2754 aa9.93□□□□□ -0.82
LIN28A-202ENST00000326279 A0A087X0K7 114 aa9.93□□□□□ -0.82
LIN28A-202ENST00000326279 SCGB1C2P0DMR2 95 aa9.93□□□□□ -0.82
LIN28A-202ENST00000326279 SUMO2P61956 95 aaKnown RBP9.93□□□□□ -0.82
LIN28A-202ENST00000326279 A0A096LPF7 62 aa9.92□□□□□ -0.82
LIN28A-202ENST00000326279 TRGV4A0A0C4DH28 118 aa9.92□□□□□ -0.82
LIN28A-202ENST00000326279 IGLL1P15814 213 aa9.92□□□□□ -0.82
LIN28A-202ENST00000326279 SFTA2Q6UW10 78 aa9.92□□□□□ -0.82
LIN28A-202ENST00000326279 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
LIN28A-202ENST00000326279 NAA38Q9BRA0 125 aaKnown RBP9.92□□□□□ -0.82
LIN28A-202ENST00000326279 INSP01308 110 aa9.92□□□□□ -0.82
LIN28A-202ENST00000326279 ZC2HC1BQ5TFG8 222 aa9.92□□□□□ -0.82
LIN28A-202ENST00000326279 GEMIN7Q9H840 131 aaKnown RBP9.92□□□□□ -0.82
LIN28A-202ENST00000326279 GAGE12BA1L429 117 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms