RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 JPT2Q9H910 190 aa9.82□□□□□ -0.84
HMGCS1-201ENST00000325110 IGHV4-39P01824 125 aa9.82□□□□□ -0.84
HMGCS1-201ENST00000325110 CLEC2AQ6UVW9 174 aa9.82□□□□□ -0.84
HMGCS1-201ENST00000325110 SMPXQ9UHP9 88 aa9.82□□□□□ -0.84
HMGCS1-201ENST00000325110 IGHV1-69DA0A0B4J2H0 117 aa9.82□□□□□ -0.84
HMGCS1-201ENST00000325110 SIVA1O15304 175 aa9.82□□□□□ -0.84
HMGCS1-201ENST00000325110 IGHV1-69P01742 117 aa9.82□□□□□ -0.84
HMGCS1-201ENST00000325110 TMEM170BQ5T4T1 132 aa9.82□□□□□ -0.84
HMGCS1-201ENST00000325110 DUX5Q96PT3 197 aa9.82□□□□□ -0.84
HMGCS1-201ENST00000325110 PIMREGQ9BSJ6 248 aa9.82□□□□□ -0.84
HMGCS1-201ENST00000325110 ZNF815PA8K554 130 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 H7C1H1 209 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 ORMDL2Q53FV1 153 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 CCL19Q99731 98 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 TRAV12-2A0A075B6T6 113 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 A0A087WX48 190 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 H3BMG7 143 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 C9orf47Q6ZRZ4 202 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 Q6ZS46 218 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 CEND1Q8N111 149 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 NRACQ8N912 160 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 MAPK1IP1LQ8NDC0 245 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 OR5A1Q8NGJ0 315 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 LINC00477Q96M19 166 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 ZNF56Q15929 161 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 ARL6IP6Q8N6S5 226 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 SPOCK3Q9BQ16 436 aa9.81□□□□□ -0.84
HMGCS1-201ENST00000325110 F8VRH5 84 aa9.8□□□□□ -0.84
HMGCS1-201ENST00000325110 EDN2P20800 178 aa9.8□□□□□ -0.84
HMGCS1-201ENST00000325110 CNFNQ9BYD5 112 aa9.8□□□□□ -0.84
HMGCS1-201ENST00000325110 OVOL1O14753 267 aa9.8□□□□□ -0.84
HMGCS1-201ENST00000325110 PLNP26678 52 aa9.8□□□□□ -0.84
HMGCS1-201ENST00000325110 IGHV3-64A0A075B6Q5 118 aa9.79□□□□□ -0.84
HMGCS1-201ENST00000325110 TEX48A0A1B0GUV7 120 aa9.79□□□□□ -0.84
HMGCS1-201ENST00000325110 FAM223BA6NKX1 122 aa9.79□□□□□ -0.84
HMGCS1-201ENST00000325110 PSMG4Q5JS54 123 aa9.79□□□□□ -0.84
HMGCS1-201ENST00000325110 KHDC1LQ5JSQ8 128 aa9.79□□□□□ -0.84
HMGCS1-201ENST00000325110 FAM223AQ8IWN6 122 aa9.79□□□□□ -0.84
HMGCS1-201ENST00000325110 MRPL16Q9NX20 251 aaKnown RBP9.79□□□□□ -0.84
HMGCS1-201ENST00000325110 ETDBQ3ZM63 59 aa9.79□□□□□ -0.84
HMGCS1-201ENST00000325110 COX8CQ7Z4L0 72 aa9.79□□□□□ -0.84
HMGCS1-201ENST00000325110 ZNF575Q86XF7 245 aa9.79□□□□□ -0.84
HMGCS1-201ENST00000325110 KLHL30-AS1Q8NEE0 82 aa9.79□□□□□ -0.84
HMGCS1-201ENST00000325110 PRADC1Q9BSG0 188 aa9.79□□□□□ -0.84
HMGCS1-201ENST00000325110 FLNCQ14315 2725 aa9.79□□□□□ -0.84
HMGCS1-201ENST00000325110 H7C2G1 150 aa9.78□□□□□ -0.84
HMGCS1-201ENST00000325110 SLC25A16P16260 332 aa9.78□□□□□ -0.84
HMGCS1-201ENST00000325110 NRGNQ92686 78 aa9.78□□□□□ -0.84
HMGCS1-201ENST00000325110 MRAP2Q96G30 205 aa9.78□□□□□ -0.84
HMGCS1-201ENST00000325110 PRSS29PA6NIE9 313 aa9.78□□□□□ -0.84
HMGCS1-201ENST00000325110 DUSP14O95147 198 aaKnown RBP9.78□□□□□ -0.84
HMGCS1-201ENST00000325110 ZFAND2AQ8N6M9 145 aa9.78□□□□□ -0.84
HMGCS1-201ENST00000325110 RASL10AQ92737 203 aa9.78□□□□□ -0.84
HMGCS1-201ENST00000325110 TP53TG1Q9Y2A0 90 aa9.78□□□□□ -0.84
HMGCS1-201ENST00000325110 SH2D6Q7Z4S9 175 aa9.78□□□□□ -0.84
HMGCS1-201ENST00000325110 KIR2DL4Q99706 377 aa9.78□□□□□ -0.84
HMGCS1-201ENST00000325110 GTSF1LQ9H1H1 148 aa9.78□□□□□ -0.84
HMGCS1-201ENST00000325110 C12orf74Q32Q52 190 aa9.77□□□□□ -0.84
HMGCS1-201ENST00000325110 KLK9Q9UKQ9 250 aa9.77□□□□□ -0.84
HMGCS1-201ENST00000325110 NDUFA4O00483 81 aa9.77□□□□□ -0.85
HMGCS1-201ENST00000325110 RPL39P62891 51 aaKnown RBP9.77□□□□□ -0.85
HMGCS1-201ENST00000325110 SRSF2Q01130 221 aaKnown RBP9.77□□□□□ -0.85
HMGCS1-201ENST00000325110 WFDC2Q14508 124 aa9.77□□□□□ -0.85
HMGCS1-201ENST00000325110 ZNF418Q8TF45 676 aaPredicted RBP9.77□□□□□ -0.85
HMGCS1-201ENST00000325110 AJUBAQ96IF1 538 aa9.77□□□□□ -0.85
HMGCS1-201ENST00000325110 A0A1B0GWB2 263 aa9.77□□□□□ -0.85
HMGCS1-201ENST00000325110 ID1P41134 155 aa9.77□□□□□ -0.85
HMGCS1-201ENST00000325110 UFSP1Q6NVU6 142 aa9.77□□□□□ -0.85
HMGCS1-201ENST00000325110 DAZ1Q9NQZ3 744 aaKnown RBP9.77□□□□□ -0.85
HMGCS1-201ENST00000325110 ABCA2Q9BZC7 2435 aa9.76□□□□□ -0.85
HMGCS1-201ENST00000325110 IGLV2-18A0A075B6J9 118 aa9.76□□□□□ -0.85
HMGCS1-201ENST00000325110 IGHV3-73A0A0B4J1V6 119 aa9.76□□□□□ -0.85
HMGCS1-201ENST00000325110 HLA-DRB4P13762 266 aa9.76□□□□□ -0.85
HMGCS1-201ENST00000325110 SMAGPQ0VAQ4 97 aa9.76□□□□□ -0.85
HMGCS1-201ENST00000325110 ITLN2Q8WWU7 325 aaPredicted RBP9.76□□□□□ -0.85
HMGCS1-201ENST00000325110 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
HMGCS1-201ENST00000325110 HLA-DRB4X5D2U9 266 aa9.76□□□□□ -0.85
HMGCS1-201ENST00000325110 SCGB1C2P0DMR2 95 aa9.76□□□□□ -0.85
HMGCS1-201ENST00000325110 MRPL53Q96EL3 112 aaKnown RBP9.76□□□□□ -0.85
HMGCS1-201ENST00000325110 IGHV4-30-2A0A087WSY4 118 aa9.76□□□□□ -0.85
HMGCS1-201ENST00000325110 MYMXA0A1B0GTQ4 84 aa9.76□□□□□ -0.85
HMGCS1-201ENST00000325110 CRYBG3Q68DQ2 2970 aa9.75□□□□□ -0.85
HMGCS1-201ENST00000325110 IGLL5B9A064 214 aa9.75□□□□□ -0.85
HMGCS1-201ENST00000325110 J3QR89 54 aa9.75□□□□□ -0.85
HMGCS1-201ENST00000325110 HERVK_113P61574 105 aa9.75□□□□□ -0.85
HMGCS1-201ENST00000325110 SPINK13Q1W4C9 94 aa9.75□□□□□ -0.85
HMGCS1-201ENST00000325110 C10orf99Q6UWK7 81 aa9.75□□□□□ -0.85
HMGCS1-201ENST00000325110 HIGD1BQ9P298 99 aa9.74□□□□□ -0.85
HMGCS1-201ENST00000325110 HOXA3O43365 443 aaPredicted RBP9.74□□□□□ -0.85
HMGCS1-201ENST00000325110 PSMB2P49721 201 aa9.74□□□□□ -0.85
HMGCS1-201ENST00000325110 BAALCQ8WXS3 180 aa9.74□□□□□ -0.85
HMGCS1-201ENST00000325110 LINC01549A6NIU2 74 aa9.74□□□□□ -0.85
HMGCS1-201ENST00000325110 ANKRD17O75179 2603 aaKnown RBP9.73□□□□□ -0.85
HMGCS1-201ENST00000325110 SDHAF1A6NFY7 115 aa9.73□□□□□ -0.85
HMGCS1-201ENST00000325110 GPHB5Q86YW7 130 aa9.73□□□□□ -0.85
HMGCS1-201ENST00000325110 USMG5Q96IX5 58 aa9.73□□□□□ -0.85
HMGCS1-201ENST00000325110 SYNJ2BPP57105 145 aa9.73□□□□□ -0.85
HMGCS1-201ENST00000325110 GAGE13Q4V321 117 aa9.73□□□□□ -0.85
HMGCS1-201ENST00000325110 ZMAT4Q9H898 229 aa9.73□□□□□ -0.85
HMGCS1-201ENST00000325110 DOPEY1Q5JWR5 2465 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms