RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 C10orf126Q8N4M7 172 aa8.27□□□□□ -1.09
TPM3-204ENST00000323144 LINC00479Q96M42 142 aa8.27□□□□□ -1.09
TPM3-204ENST00000323144 MED28Q9H204 178 aa8.27□□□□□ -1.09
TPM3-204ENST00000323144 ARL2-SNX15V9GYD0 113 aa8.27□□□□□ -1.09
TPM3-204ENST00000323144 FXYD6-FXYD2A0A087WZ82 144 aa8.26□□□□□ -1.09
TPM3-204ENST00000323144 CXorf1O96002 111 aa8.26□□□□□ -1.09
TPM3-204ENST00000323144 UBE2G2P60604 165 aa8.26□□□□□ -1.09
TPM3-204ENST00000323144 PARLQ9H300 379 aa8.26□□□□□ -1.09
TPM3-204ENST00000323144 TMEM167BQ9NRX6 74 aa8.26□□□□□ -1.09
TPM3-204ENST00000323144 EPDR1Q9UM22 224 aa8.26□□□□□ -1.09
TPM3-204ENST00000323144 HERC1Q15751 4861 aa8.26□□□□□ -1.09
TPM3-204ENST00000323144 MYCBP2O75592 4640 aa8.25□□□□□ -1.09
TPM3-204ENST00000323144 IGKV3D-20A0A0C4DH25 116 aa8.25□□□□□ -1.09
TPM3-204ENST00000323144 TRBV6-4A0A1B0GX49 114 aa8.25□□□□□ -1.09
TPM3-204ENST00000323144 G3V3Q6 166 aa8.25□□□□□ -1.09
TPM3-204ENST00000323144 H3BVH4 76 aa8.25□□□□□ -1.09
TPM3-204ENST00000323144 K7EP13 123 aa8.25□□□□□ -1.09
TPM3-204ENST00000323144 K7EQM0 130 aa8.25□□□□□ -1.09
TPM3-204ENST00000323144 TAAR5O14804 337 aa8.25□□□□□ -1.09
TPM3-204ENST00000323144 PSCAO43653 123 aa8.25□□□□□ -1.09
TPM3-204ENST00000323144 GIPP09681 153 aaPredicted RBP8.25□□□□□ -1.09
TPM3-204ENST00000323144 FGF8P55075 233 aaPredicted RBP8.25□□□□□ -1.09
TPM3-204ENST00000323144 SH2D6Q7Z4S9 175 aa8.25□□□□□ -1.09
TPM3-204ENST00000323144 PRADC1Q9BSG0 188 aa8.25□□□□□ -1.09
TPM3-204ENST00000323144 ACTR3CQ9C0K3 210 aaPredicted RBP8.25□□□□□ -1.09
TPM3-204ENST00000323144 JPT2Q9H910 190 aa8.25□□□□□ -1.09
TPM3-204ENST00000323144 Q9UF83 564 aa8.25□□□□□ -1.09
TPM3-204ENST00000323144 IGLV5-52A0A0A0MRZ9 124 aa8.24□□□□□ -1.09
TPM3-204ENST00000323144 IBA57-AS1B1ANH7 110 aa8.24□□□□□ -1.09
TPM3-204ENST00000323144 PEX7O00628 323 aa8.24□□□□□ -1.09
TPM3-204ENST00000323144 SMR3BP02814 79 aaPredicted RBP8.24□□□□□ -1.09
TPM3-204ENST00000323144 GCSHP23434 173 aa8.24□□□□□ -1.09
TPM3-204ENST00000323144 SERF2P84101 59 aa8.24□□□□□ -1.09
TPM3-204ENST00000323144 LELP1Q5T871 98 aa8.24□□□□□ -1.09
TPM3-204ENST00000323144 TNFSF18Q9UNG2 199 aa8.24□□□□□ -1.09
TPM3-204ENST00000323144 TRAV8-6A0A0B4J262 113 aa8.23□□□□□ -1.09
TPM3-204ENST00000323144 CTXND1A0A1B0GTU2 59 aa8.23□□□□□ -1.09
TPM3-204ENST00000323144 GAGE12JA6NER3 117 aa8.23□□□□□ -1.09
TPM3-204ENST00000323144 M0R036 132 aa8.23□□□□□ -1.09
TPM3-204ENST00000323144 MBP02144 154 aa8.23□□□□□ -1.09
TPM3-204ENST00000323144 INAFM2P0DMQ5 153 aa8.23□□□□□ -1.09
TPM3-204ENST00000323144 MGST1P10620 155 aaKnown RBP8.23□□□□□ -1.09
TPM3-204ENST00000323144 GAGE1Q13065 139 aa8.23□□□□□ -1.09
TPM3-204ENST00000323144 GAGE4Q13068 117 aa8.23□□□□□ -1.09
TPM3-204ENST00000323144 GAGE5Q13069 117 aa8.23□□□□□ -1.09
TPM3-204ENST00000323144 GAGE13Q4V321 117 aa8.23□□□□□ -1.09
TPM3-204ENST00000323144 C14orf178Q8N769 122 aaPredicted RBP8.23□□□□□ -1.09
TPM3-204ENST00000323144 Q8N814 137 aa8.23□□□□□ -1.09
TPM3-204ENST00000323144 ZC2HC1AQ96GY0 325 aa8.23□□□□□ -1.09
TPM3-204ENST00000323144 SAMD10Q9BYL1 202 aa8.23□□□□□ -1.09
TPM3-204ENST00000323144 A0A1W2PRE2 83 aa8.22□□□□□ -1.09
TPM3-204ENST00000323144 FAM74A7A6NL05 159 aa8.22□□□□□ -1.09
TPM3-204ENST00000323144 ASIPP42127 132 aa8.22□□□□□ -1.09
TPM3-204ENST00000323144 UFSP1Q6NVU6 142 aa8.22□□□□□ -1.09
TPM3-204ENST00000323144 ATP6V0E2Q8NHE4 81 aa8.22□□□□□ -1.09
TPM3-204ENST00000323144 FRZBQ92765 325 aa8.22□□□□□ -1.09
TPM3-204ENST00000323144 PTH2Q96A98 100 aa8.22□□□□□ -1.09
TPM3-204ENST00000323144 GTSF1LQ9H1H1 148 aa8.22□□□□□ -1.09
TPM3-204ENST00000323144 DNAH8Q96JB1 4490 aa8.22□□□□□ -1.09
TPM3-204ENST00000323144 LECT2O14960 151 aa8.21□□□□□ -1.1
TPM3-204ENST00000323144 SH2D1AO60880 128 aa8.21□□□□□ -1.1
TPM3-204ENST00000323144 IFNA7P01567 189 aa8.21□□□□□ -1.1
TPM3-204ENST00000323144 S100A4P26447 101 aaKnown RBP8.21□□□□□ -1.1
TPM3-204ENST00000323144 LGALSLQ3ZCW2 172 aaPredicted RBP8.21□□□□□ -1.1
TPM3-204ENST00000323144 OR2T35Q8NGX2 323 aa8.21□□□□□ -1.1
TPM3-204ENST00000323144 NTN5Q8WTR8 489 aaPredicted RBP8.21□□□□□ -1.1
TPM3-204ENST00000323144 FAM30AQ9NZY2 134 aa8.21□□□□□ -1.1
TPM3-204ENST00000323144 BORCS7-ASMTA0A0B4J1R7 106 aa8.2□□□□□ -1.1
TPM3-204ENST00000323144 GRIFINA4D1Z8 144 aa8.2□□□□□ -1.1
TPM3-204ENST00000323144 MAP1LC3B2A6NCE7 125 aa8.2□□□□□ -1.1
TPM3-204ENST00000323144 B4DEV8 164 aa8.2□□□□□ -1.1
TPM3-204ENST00000323144 CRIP1P50238 77 aa8.2□□□□□ -1.1
TPM3-204ENST00000323144 LAGE3Q14657 143 aa8.2□□□□□ -1.1
TPM3-204ENST00000323144 SAPCD1Q5SSQ6 148 aa8.2□□□□□ -1.1
TPM3-204ENST00000323144 DAZ4Q86SG3 579 aaKnown RBP8.2□□□□□ -1.1
TPM3-204ENST00000323144 INO80EQ8NBZ0 244 aaPredicted RBP8.2□□□□□ -1.1
TPM3-204ENST00000323144 DNAJC30Q96LL9 226 aa8.2□□□□□ -1.1
TPM3-204ENST00000323144 TMEM70Q9BUB7 260 aa8.2□□□□□ -1.1
TPM3-204ENST00000323144 MAP1LC3BQ9GZQ8 125 aa8.2□□□□□ -1.1
TPM3-204ENST00000323144 DAZ3Q9NR90 486 aaKnown RBP8.2□□□□□ -1.1
TPM3-204ENST00000323144 IL36BQ9NZH7 164 aa8.2□□□□□ -1.1
TPM3-204ENST00000323144 DMBT1Q9UGM3 2413 aaPredicted RBP8.2□□□□□ -1.1
TPM3-204ENST00000323144 TMSB15BA0A087X1C1 80 aa8.19□□□□□ -1.1
TPM3-204ENST00000323144 A8MWV9 139 aa8.19□□□□□ -1.1
TPM3-204ENST00000323144 KRBOX1C9JBD0 128 aa8.19□□□□□ -1.1
TPM3-204ENST00000323144 SMLR1H3BR10 107 aa8.19□□□□□ -1.1
TPM3-204ENST00000323144 CIDEAO60543 219 aa8.19□□□□□ -1.1
TPM3-204ENST00000323144 AKR1C8PQ5T2L2 129 aa8.19□□□□□ -1.1
TPM3-204ENST00000323144 FAM74A4Q5TZK3 123 aa8.19□□□□□ -1.1
TPM3-204ENST00000323144 ZFP2Q6ZN57 461 aa8.19□□□□□ -1.1
TPM3-204ENST00000323144 BATF3Q9NR55 127 aa8.19□□□□□ -1.1
TPM3-204ENST00000323144 SRRM2Q9UQ35 2752 aaKnown RBP8.19□□□□□ -1.1
TPM3-204ENST00000323144 A0A087WWL8 130 aa8.18□□□□□ -1.1
TPM3-204ENST00000323144 ARPC5O15511 151 aa8.18□□□□□ -1.1
TPM3-204ENST00000323144 DMRTA1Q5VZB9 504 aa8.18□□□□□ -1.1
TPM3-204ENST00000323144 CYTL1Q9NRR1 136 aa8.18□□□□□ -1.1
TPM3-204ENST00000323144 FLG2Q5D862 2391 aaPredicted RBP8.17□□□□□ -1.1
TPM3-204ENST00000323144 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.17□□□□□ -1.1
TPM3-204ENST00000323144 FABP5P3A8MUU1 101 aa8.17□□□□□ -1.1
TPM3-204ENST00000323144 M0R381 172 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms