RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 FGF8P55075 233 aaPredicted RBP12.05□□□□□ -0.48
TPM1-203ENST00000317516 ZNF506Q5JVG8 444 aa12.05□□□□□ -0.48
TPM1-203ENST00000317516 PIK3CD-AS1Q5SR53 167 aa12.05□□□□□ -0.48
TPM1-203ENST00000317516 MAPKAPK5-AS1Q8N8E1 139 aa12.05□□□□□ -0.48
TPM1-203ENST00000317516 IGHV3-73A0A0B4J1V6 119 aa12.04□□□□□ -0.48
TPM1-203ENST00000317516 IGHV3-38A0A0C4DH36 116 aa12.04□□□□□ -0.48
TPM1-203ENST00000317516 FAM74A7A6NL05 159 aa12.04□□□□□ -0.48
TPM1-203ENST00000317516 ASIPP42127 132 aa12.04□□□□□ -0.48
TPM1-203ENST00000317516 CDPF1Q6NVV7 123 aa12.04□□□□□ -0.48
TPM1-203ENST00000317516 DPPA3Q6W0C5 159 aa12.04□□□□□ -0.48
TPM1-203ENST00000317516 ZFP30Q9Y2G7 519 aa12.04□□□□□ -0.48
TPM1-203ENST00000317516 MAP1LC3B2A6NCE7 125 aa12.03□□□□□ -0.48
TPM1-203ENST00000317516 A8MWV9 139 aa12.03□□□□□ -0.48
TPM1-203ENST00000317516 TCEAL7Q9BRU2 100 aa12.03□□□□□ -0.48
TPM1-203ENST00000317516 MAP1LC3BQ9GZQ8 125 aa12.03□□□□□ -0.48
TPM1-203ENST00000317516 CYTL1Q9NRR1 136 aa12.03□□□□□ -0.48
TPM1-203ENST00000317516 IGKV3D-20A0A0C4DH25 116 aa12.02□□□□□ -0.49
TPM1-203ENST00000317516 G3V3Q6 166 aa12.02□□□□□ -0.49
TPM1-203ENST00000317516 UBE2G1P62253 170 aa12.02□□□□□ -0.49
TPM1-203ENST00000317516 LGALSLQ3ZCW2 172 aaPredicted RBP12.02□□□□□ -0.49
TPM1-203ENST00000317516 OR10J3Q5JRS4 329 aa12.02□□□□□ -0.49
TPM1-203ENST00000317516 ZFP2Q6ZN57 461 aa12.02□□□□□ -0.49
TPM1-203ENST00000317516 A0A087WTM6 91 aa12.01□□□□□ -0.49
TPM1-203ENST00000317516 B4DEV8 164 aa12.01□□□□□ -0.49
TPM1-203ENST00000317516 FHITP49789 147 aa12.01□□□□□ -0.49
TPM1-203ENST00000317516 LINC01556Q5JQF7 62 aa12.01□□□□□ -0.49
TPM1-203ENST00000317516 Q86TA4 180 aa12.01□□□□□ -0.49
TPM1-203ENST00000317516 ATP6V0E2Q8NHE4 81 aa12.01□□□□□ -0.49
TPM1-203ENST00000317516 FMC1Q96HJ9 113 aa12.01□□□□□ -0.49
TPM1-203ENST00000317516 IL36BQ9NZH7 164 aa12.01□□□□□ -0.49
TPM1-203ENST00000317516 PCLOQ9Y6V0 5065 aa12.01□□□□□ -0.49
TPM1-203ENST00000317516 LELP1Q5T871 98 aa12□□□□□ -0.49
TPM1-203ENST00000317516 CST9LP1Q5W188 147 aa12□□□□□ -0.49
TPM1-203ENST00000317516 SYT8Q8NBV8 401 aa12□□□□□ -0.49
TPM1-203ENST00000317516 GTSF1LQ9H1H1 148 aa12□□□□□ -0.49
TPM1-203ENST00000317516 PSCAO43653 123 aa11.99□□□□□ -0.49
TPM1-203ENST00000317516 ZNF345Q14585 488 aa11.99□□□□□ -0.49
TPM1-203ENST00000317516 FAM162BQ5T6X4 162 aa11.99□□□□□ -0.49
TPM1-203ENST00000317516 COX8CQ7Z4L0 72 aa11.99□□□□□ -0.49
TPM1-203ENST00000317516 Q8N1X5 172 aa11.99□□□□□ -0.49
TPM1-203ENST00000317516 KCNRGQ8N5I3 272 aa11.99□□□□□ -0.49
TPM1-203ENST00000317516 KRTAP4-5Q9BYR2 181 aa11.99□□□□□ -0.49
TPM1-203ENST00000317516 PARLQ9H300 379 aa11.99□□□□□ -0.49
TPM1-203ENST00000317516 IBA57-AS1B1ANH7 110 aa11.98□□□□□ -0.49
TPM1-203ENST00000317516 UMAD1C9J7I0 102 aa11.98□□□□□ -0.49
TPM1-203ENST00000317516 SEC11BP0C7V7 166 aa11.98□□□□□ -0.49
TPM1-203ENST00000317516 DNLZQ5SXM8 178 aa11.98□□□□□ -0.49
TPM1-203ENST00000317516 ZC2HC1AQ96GY0 325 aa11.98□□□□□ -0.49
TPM1-203ENST00000317516 A0A0D9SG52 128 aa11.97□□□□□ -0.49
TPM1-203ENST00000317516 TRBV6-1A0A0K0K1D8 114 aa11.97□□□□□ -0.49
TPM1-203ENST00000317516 KRBOX1C9JBD0 128 aa11.97□□□□□ -0.49
TPM1-203ENST00000317516 SMLR1H3BR10 107 aa11.97□□□□□ -0.49
TPM1-203ENST00000317516 M0R036 132 aa11.97□□□□□ -0.49
TPM1-203ENST00000317516 CRIP1P50238 77 aa11.97□□□□□ -0.49
TPM1-203ENST00000317516 SCRT2Q9NQ03 307 aa11.97□□□□□ -0.49
TPM1-203ENST00000317516 HMSDA8MTL9 139 aa11.96□□□□□ -0.49
TPM1-203ENST00000317516 H3BVH4 76 aa11.96□□□□□ -0.49
TPM1-203ENST00000317516 RHODO00212 210 aa11.96□□□□□ -0.49
TPM1-203ENST00000317516 SH2D1AO60880 128 aa11.96□□□□□ -0.49
TPM1-203ENST00000317516 S100A9P06702 114 aaKnown RBP11.96□□□□□ -0.49
TPM1-203ENST00000317516 ARMS2P0C7Q2 107 aa11.96□□□□□ -0.49
TPM1-203ENST00000317516 AKR1C3P42330 323 aa11.96□□□□□ -0.49
TPM1-203ENST00000317516 EIF5AP63241 154 aaKnown RBP11.96□□□□□ -0.49
TPM1-203ENST00000317516 DMRTA1Q5VZB9 504 aa11.96□□□□□ -0.49
TPM1-203ENST00000317516 OR11H4Q8NGC9 324 aa11.96□□□□□ -0.49
TPM1-203ENST00000317516 SFT2D1Q8WV19 159 aa11.96□□□□□ -0.49
TPM1-203ENST00000317516 PHLDA3Q9Y5J5 127 aa11.96□□□□□ -0.49
TPM1-203ENST00000317516 RYR1P21817 5038 aa11.96□□□□□ -0.5
TPM1-203ENST00000317516 KANTRA0A1W2PQU2 76 aa11.95□□□□□ -0.5
TPM1-203ENST00000317516 GAGE12JA6NER3 117 aa11.95□□□□□ -0.5
TPM1-203ENST00000317516 PAGE4O60829 102 aa11.95□□□□□ -0.5
TPM1-203ENST00000317516 LTAP01374 205 aa11.95□□□□□ -0.5
TPM1-203ENST00000317516 TPT1P13693 172 aaKnown RBP11.95□□□□□ -0.5
TPM1-203ENST00000317516 GAGE1Q13065 139 aa11.95□□□□□ -0.5
TPM1-203ENST00000317516 GAGE4Q13068 117 aa11.95□□□□□ -0.5
TPM1-203ENST00000317516 GAGE5Q13069 117 aa11.95□□□□□ -0.5
TPM1-203ENST00000317516 ZNF674Q2M3X9 581 aa11.95□□□□□ -0.5
TPM1-203ENST00000317516 GAGE13Q4V321 117 aa11.95□□□□□ -0.5
TPM1-203ENST00000317516 Q6ZSN1 163 aa11.95□□□□□ -0.5
TPM1-203ENST00000317516 MBD3L1Q8WWY6 194 aa11.95□□□□□ -0.5
TPM1-203ENST00000317516 A0A087WWC5 75 aa11.94□□□□□ -0.5
TPM1-203ENST00000317516 GRIFINA4D1Z8 144 aa11.94□□□□□ -0.5
TPM1-203ENST00000317516 IGHV3-30P01768 117 aa11.94□□□□□ -0.5
TPM1-203ENST00000317516 IGHV3-33P01772 117 aa11.94□□□□□ -0.5
TPM1-203ENST00000317516 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
TPM1-203ENST00000317516 IGHV3-30-5P0DP03 117 aa11.94□□□□□ -0.5
TPM1-203ENST00000317516 FAM213BQ8TBF2 198 aa11.94□□□□□ -0.5
TPM1-203ENST00000317516 ZNF471Q9BX82 626 aaPredicted RBP11.94□□□□□ -0.5
TPM1-203ENST00000317516 LRP1BQ9NZR2 4599 aa11.94□□□□□ -0.5
TPM1-203ENST00000317516 PFDN1O60925 122 aa11.93□□□□□ -0.5
TPM1-203ENST00000317516 FUSP35637 526 aaKnown RBP eCLIP11.93□□□□□ -0.5
TPM1-203ENST00000317516 LINC01559Q495D7 138 aa11.93□□□□□ -0.5
TPM1-203ENST00000317516 UFSP1Q6NVU6 142 aa11.93□□□□□ -0.5
TPM1-203ENST00000317516 SAMD10Q9BYL1 202 aa11.93□□□□□ -0.5
TPM1-203ENST00000317516 JPT2Q9H910 190 aa11.93□□□□□ -0.5
TPM1-203ENST00000317516 Q9HAA7 133 aa11.93□□□□□ -0.5
TPM1-203ENST00000317516 LAGE3Q14657 143 aa11.92□□□□□ -0.5
TPM1-203ENST00000317516 TM2D2Q9BX73 214 aa11.92□□□□□ -0.5
TPM1-203ENST00000317516 TMSB15BA0A087X1C1 80 aa11.91□□□□□ -0.5
TPM1-203ENST00000317516 M0R381 172 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms