RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 ZNF80P51504 273 aaPredicted RBP10.34□□□□□ -0.75
PCDHB9-201ENST00000316105 TCTEX1D4Q5JR98 221 aa10.34□□□□□ -0.75
PCDHB9-201ENST00000316105 HOXA3O43365 443 aaPredicted RBP10.34□□□□□ -0.75
PCDHB9-201ENST00000316105 GNRH2O43555 120 aa10.34□□□□□ -0.75
PCDHB9-201ENST00000316105 COX8AP10176 69 aa10.34□□□□□ -0.75
PCDHB9-201ENST00000316105 C2orf66Q6UXQ4 117 aa10.34□□□□□ -0.75
PCDHB9-201ENST00000316105 SPINK8P0C7L1 97 aa10.33□□□□□ -0.76
PCDHB9-201ENST00000316105 SMIM2Q9BVW6 85 aa10.33□□□□□ -0.76
PCDHB9-201ENST00000316105 DKK2Q9UBU2 259 aa10.33□□□□□ -0.76
PCDHB9-201ENST00000316105 LENEPQ9Y5L5 61 aa10.33□□□□□ -0.76
PCDHB9-201ENST00000316105 TRAV8-2A0A0B4J237 113 aa10.33□□□□□ -0.76
PCDHB9-201ENST00000316105 NEGR1Q7Z3B1 354 aa10.33□□□□□ -0.76
PCDHB9-201ENST00000316105 PTPRBP23467 1997 aa10.33□□□□□ -0.76
PCDHB9-201ENST00000316105 IGHG2P01859 326 aa10.32□□□□□ -0.76
PCDHB9-201ENST00000316105 VPREB3Q9UKI3 123 aa10.32□□□□□ -0.76
PCDHB9-201ENST00000316105 BVES-AS1Q5T3Y7 98 aa10.32□□□□□ -0.76
PCDHB9-201ENST00000316105 IGKV3OR2-268A0A0C4DH90 116 aa10.32□□□□□ -0.76
PCDHB9-201ENST00000316105 CTRLP40313 264 aa10.32□□□□□ -0.76
PCDHB9-201ENST00000316105 FASNP49327 2511 aaKnown RBP10.32□□□□□ -0.76
PCDHB9-201ENST00000316105 CD28P10747 220 aa10.32□□□□□ -0.76
PCDHB9-201ENST00000316105 IGHV3-64A0A075B6Q5 118 aa10.31□□□□□ -0.76
PCDHB9-201ENST00000316105 ETDBQ3ZM63 59 aa10.31□□□□□ -0.76
PCDHB9-201ENST00000316105 C19orf54Q5BKX5 351 aa10.31□□□□□ -0.76
PCDHB9-201ENST00000316105 ZFAND6Q6FIF0 208 aa10.31□□□□□ -0.76
PCDHB9-201ENST00000316105 MRPL35Q9NZE8 188 aaKnown RBP10.31□□□□□ -0.76
PCDHB9-201ENST00000316105 LINC01549A6NIU2 74 aa10.31□□□□□ -0.76
PCDHB9-201ENST00000316105 C2orf70A6NJV1 201 aa10.31□□□□□ -0.76
PCDHB9-201ENST00000316105 CRXO43186 299 aaPredicted RBP10.31□□□□□ -0.76
PCDHB9-201ENST00000316105 IGLV2-11P01706 119 aa10.31□□□□□ -0.76
PCDHB9-201ENST00000316105 Q8N6K4 173 aa10.31□□□□□ -0.76
PCDHB9-201ENST00000316105 ELANEP08246 267 aa10.31□□□□□ -0.76
PCDHB9-201ENST00000316105 NACAE9PAV3 2078 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 TRGV2A0A075B6R0 118 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 A0A1W2PPR1 153 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 C9orf118A6NHY6 69 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 CRIP1P50238 77 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 CHAC1Q9BUX1 264 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 KNCNA6PVL3 124 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 TP53TG1Q9Y2A0 90 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 LRRK2Q5S007 2527 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 IGHV1OR15-1A0A075B7D0 117 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 GAGE2BQ13066 116 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 GAGE2EQ4V326 116 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 LINC01545Q5VT33 79 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 C9orf47Q6ZRZ4 202 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 GAGE2DQ9UEU5 116 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 HOXD3P31249 432 aaPredicted RBP10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 ZNF415Q09FC8 603 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 DEFB136Q30KP8 78 aa10.3□□□□□ -0.76
PCDHB9-201ENST00000316105 GAGE12HA6NDE8 117 aa10.29□□□□□ -0.76
PCDHB9-201ENST00000316105 NSUN5P1Q3KNT7 163 aa10.29□□□□□ -0.76
PCDHB9-201ENST00000316105 UBE2E2Q96LR5 201 aa10.29□□□□□ -0.76
PCDHB9-201ENST00000316105 SPEGQ15772 3267 aa10.29□□□□□ -0.76
PCDHB9-201ENST00000316105 SDHAF1A6NFY7 115 aa10.29□□□□□ -0.76
PCDHB9-201ENST00000316105 LINC01619G3V211 115 aa10.29□□□□□ -0.76
PCDHB9-201ENST00000316105 H3BRM9 83 aa10.29□□□□□ -0.76
PCDHB9-201ENST00000316105 CIRBPQ14011 172 aaKnown RBP10.29□□□□□ -0.76
PCDHB9-201ENST00000316105 MGAQ8IWI9 3026 aa10.29□□□□□ -0.76
PCDHB9-201ENST00000316105 A6NDX4 124 aa10.29□□□□□ -0.76
PCDHB9-201ENST00000316105 K7EP34 96 aa10.29□□□□□ -0.76
PCDHB9-201ENST00000316105 ZFAND3Q9H8U3 227 aa10.29□□□□□ -0.76
PCDHB9-201ENST00000316105 SMAD5-AS1Q9Y6J3 95 aa10.28□□□□□ -0.76
PCDHB9-201ENST00000316105 IGKV3D-20A0A0C4DH25 116 aa10.28□□□□□ -0.76
PCDHB9-201ENST00000316105 TSPAN13O95857 204 aa10.28□□□□□ -0.76
PCDHB9-201ENST00000316105 LOXL1Q08397 574 aaPredicted RBP10.28□□□□□ -0.76
PCDHB9-201ENST00000316105 DEFB125Q8N687 156 aa10.28□□□□□ -0.76
PCDHB9-201ENST00000316105 RNF114Q9Y508 228 aa10.28□□□□□ -0.76
PCDHB9-201ENST00000316105 VWC2LB2RUY7 222 aa10.27□□□□□ -0.76
PCDHB9-201ENST00000316105 TMEM262E9PQX1 116 aa10.27□□□□□ -0.76
PCDHB9-201ENST00000316105 LINC00310P59036 64 aa10.27□□□□□ -0.76
PCDHB9-201ENST00000316105 ZNF493Q6ZR52 646 aa10.27□□□□□ -0.76
PCDHB9-201ENST00000316105 LGALS1P09382 135 aaKnown RBP10.27□□□□□ -0.77
PCDHB9-201ENST00000316105 C10orf126Q8N4M7 172 aa10.27□□□□□ -0.77
PCDHB9-201ENST00000316105 COPS9Q8WXC6 57 aa10.27□□□□□ -0.77
PCDHB9-201ENST00000316105 MRGPRG-AS1Q2M3A8 158 aa10.27□□□□□ -0.77
PCDHB9-201ENST00000316105 TRGV1A0A0A0MS02 117 aa10.27□□□□□ -0.77
PCDHB9-201ENST00000316105 INSP01308 110 aa10.27□□□□□ -0.77
PCDHB9-201ENST00000316105 MEIG1Q5JSS6 88 aa10.27□□□□□ -0.77
PCDHB9-201ENST00000316105 XCL2Q9UBD3 114 aa10.27□□□□□ -0.77
PCDHB9-201ENST00000316105 CELSR3Q9NYQ7 3312 aa10.26□□□□□ -0.77
PCDHB9-201ENST00000316105 TRPT1Q86TN4 253 aaKnown RBP10.26□□□□□ -0.77
PCDHB9-201ENST00000316105 RPL39LQ96EH5 51 aaKnown RBP10.26□□□□□ -0.77
PCDHB9-201ENST00000316105 PCP2Q8IVA1 136 aa10.26□□□□□ -0.77
PCDHB9-201ENST00000316105 C20orf78Q9BR46 151 aa10.26□□□□□ -0.77
PCDHB9-201ENST00000316105 A8MWV9 139 aa10.25□□□□□ -0.77
PCDHB9-201ENST00000316105 F8VRH5 84 aa10.25□□□□□ -0.77
PCDHB9-201ENST00000316105 IGHV3-53P01767 116 aa10.25□□□□□ -0.77
PCDHB9-201ENST00000316105 CITED1Q99966 193 aa10.25□□□□□ -0.77
PCDHB9-201ENST00000316105 TRAV2A0A0B4J234 112 aa10.25□□□□□ -0.77
PCDHB9-201ENST00000316105 DEFB113Q30KQ7 82 aa10.25□□□□□ -0.77
PCDHB9-201ENST00000316105 PKD1L2Q7Z442 2459 aa10.25□□□□□ -0.77
PCDHB9-201ENST00000316105 IGLC6P0CF74 106 aa10.25□□□□□ -0.77
PCDHB9-201ENST00000316105 PHLDA1Q8WV24 401 aaPredicted RBP10.25□□□□□ -0.77
PCDHB9-201ENST00000316105 IGF1P05019 195 aa10.24□□□□□ -0.77
PCDHB9-201ENST00000316105 HTN3P15516 51 aa10.24□□□□□ -0.77
PCDHB9-201ENST00000316105 SLURP1P55000 103 aa10.24□□□□□ -0.77
PCDHB9-201ENST00000316105 TMEM101Q96IK0 257 aa10.24□□□□□ -0.77
PCDHB9-201ENST00000316105 POLQO75417 2590 aa10.24□□□□□ -0.77
PCDHB9-201ENST00000316105 DSCAML1Q8TD84 2053 aa10.24□□□□□ -0.77
PCDHB9-201ENST00000316105 TEX48A0A1B0GUV7 120 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms