RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 DKK2Q9UBU2 259 aa5.61□□□□□ -1.51
CDC42-201ENST00000315554 LENEPQ9Y5L5 61 aa5.61□□□□□ -1.51
CDC42-201ENST00000315554 TMEM189A5PLL7 270 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 IFNA1P01562 189 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 SPART-AS1P0CW21 52 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 BCL2P10415 239 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 HTN3P15516 51 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 TMEM183BQ1AE95 376 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 ANXA2RQ3ZCQ2 193 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 SERTAD4-AS1Q5TG53 156 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 Q6AWC8 147 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 TMEM183AQ8IXX5 376 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 BOD1L2Q8IYS8 172 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 EIF4E3Q8N5X7 224 aaKnown RBP5.6□□□□□ -1.51
CDC42-201ENST00000315554 C2CD4CQ8TF44 421 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 TMEM263Q8WUH6 116 aaKnown RBP5.6□□□□□ -1.51
CDC42-201ENST00000315554 PHLDA1Q8WV24 401 aaPredicted RBP5.6□□□□□ -1.51
CDC42-201ENST00000315554 C16orf74Q96GX8 76 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 FMC1Q96HJ9 113 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 DERL1Q9BUN8 251 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 C11orf21Q9P2W6 132 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 KLF12Q9Y4X4 402 aa5.6□□□□□ -1.51
CDC42-201ENST00000315554 TRAV21A0A0B4J279 112 aa5.59□□□□□ -1.51
CDC42-201ENST00000315554 SNURFLB1AK76 121 aa5.59□□□□□ -1.51
CDC42-201ENST00000315554 RS1O15537 224 aa5.59□□□□□ -1.51
CDC42-201ENST00000315554 GNRH2O43555 120 aa5.59□□□□□ -1.51
CDC42-201ENST00000315554 PPBPP02775 128 aa5.59□□□□□ -1.51
CDC42-201ENST00000315554 DAD1P61803 113 aa5.59□□□□□ -1.51
CDC42-201ENST00000315554 HERV-K104P63124 156 aa5.59□□□□□ -1.51
CDC42-201ENST00000315554 MEF2BQ02080 365 aaPredicted RBP5.59□□□□□ -1.51
CDC42-201ENST00000315554 TEX261Q6UWH6 196 aa5.59□□□□□ -1.51
CDC42-201ENST00000315554 FAM159AQ6UWV7 190 aa5.59□□□□□ -1.51
CDC42-201ENST00000315554 C11orf72Q8NBR9 251 aa5.59□□□□□ -1.51
CDC42-201ENST00000315554 ZC2HC1AQ96GY0 325 aa5.59□□□□□ -1.51
CDC42-201ENST00000315554 GAGE12BA1L429 117 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 GAGE7O76087 117 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 LTAP01374 205 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 TYMSP04818 313 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 GAGE12FP0CL80 117 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 GAGE12GP0CL81 117 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 GAGE12IP0CL82 117 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 RPL35P42766 123 aaKnown RBP5.58□□□□□ -1.52
CDC42-201ENST00000315554 CEMP1Q6PRD7 247 aaPredicted RBP5.58□□□□□ -1.52
CDC42-201ENST00000315554 ZNF493Q6ZR52 646 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 Q6ZTI0 123 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 ZFP82Q8N141 532 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 C12orf57Q99622 126 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 LINC00467Q9BRT7 94 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 TCEAL7Q9BRU2 100 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 MED9Q9NWA0 146 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 MRPL16Q9NX20 251 aaKnown RBP5.58□□□□□ -1.52
CDC42-201ENST00000315554 MDFICQ9P1T7 246 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 VAX2Q9UIW0 290 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 CSDC2Q9Y534 153 aaKnown RBP5.58□□□□□ -1.52
CDC42-201ENST00000315554 TIMM8BQ9Y5J9 83 aaPredicted RBP5.58□□□□□ -1.52
CDC42-201ENST00000315554 TMSB15BA0A087X1C1 80 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 DEFB131BA0A096LNP1 70 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 TRGV1A0A0A0MS02 117 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 RBFOX3A6NFN3 312 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 LYRM9A8MSI8 78 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 M0R036 132 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 TCAPO15273 167 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 SH2D1AO60880 128 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 PFN1P07737 140 aaKnown RBP5.58□□□□□ -1.52
CDC42-201ENST00000315554 CRIP1P50238 77 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 GAGE1Q13065 139 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 COX19Q49B96 90 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 C6orf226Q5I0X4 101 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 PRR27Q6MZM9 219 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 BAGE2Q86Y30 109 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 LYPD6BQ8NI32 183 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 C11orf52Q96A22 123 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 ZFP30Q9Y2G7 519 aa5.58□□□□□ -1.52
CDC42-201ENST00000315554 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.58□□□□□ -1.52
CDC42-201ENST00000315554 STARD9Q9P2P6 4700 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 TRGV11A0A075B6L2 103 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 TRAV10A0A0B4J240 114 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 TRBV6-1A0A0K0K1D8 114 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 TEX48A0A1B0GUV7 120 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 GRIFINA4D1Z8 144 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 NUPR2A6NF83 97 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 IGLL5B9A064 214 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 IGHV3-53P01767 116 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 ORM1P02763 201 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 TCL1AP56279 114 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 ZNF415Q09FC8 603 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 CENPWQ5EE01 88 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 ZNF506Q5JVG8 444 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 TXNDC17Q9BRA2 123 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 EIF5A2Q9GZV4 153 aaKnown RBP5.57□□□□□ -1.52
CDC42-201ENST00000315554 SDF2L1Q9HCN8 221 aa5.57□□□□□ -1.52
CDC42-201ENST00000315554 DNAH7Q8WXX0 4024 aa5.56□□□□□ -1.52
CDC42-201ENST00000315554 IGKV3D-20A0A0C4DH25 116 aa5.56□□□□□ -1.52
CDC42-201ENST00000315554 IGHV3-16A0A0C4DH30 117 aa5.56□□□□□ -1.52
CDC42-201ENST00000315554 FABP5P3A8MUU1 101 aa5.56□□□□□ -1.52
CDC42-201ENST00000315554 PDE6DO43924 150 aa5.56□□□□□ -1.52
CDC42-201ENST00000315554 MGST1P10620 155 aaKnown RBP5.56□□□□□ -1.52
CDC42-201ENST00000315554 GYPEP15421 78 aa5.56□□□□□ -1.52
CDC42-201ENST00000315554 S100PP25815 95 aa5.56□□□□□ -1.52
CDC42-201ENST00000315554 TDRG1Q3Y452 100 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms