RNA–Protein interactions for RNA: ENST00000315050.11

TNIP1-201, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-201ENST00000315050 HLA-DRB4P13762 266 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 TOMM6Q96B49 74 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 HLA-DRB4X5D2U9 266 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 C19orf54Q5BKX5 351 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 ITPR1Q14643 2758 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 TRAV12-1A0A0B4J245 112 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 IGHV1-69DA0A0B4J2H0 117 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 E9PLD3 99 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 NDUFA4O00483 81 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 SOCS3O14543 225 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 OVOL1O14753 267 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 IGHV1-69P01742 117 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 IGHV4-38-2P0DP08 117 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 SCGB2A2Q13296 93 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 NEXN-AS1Q8NBZ9 246 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 BAALCQ8WXS3 180 aa9.58□□□□□ -0.88
TNIP1-201ENST00000315050 MYMXA0A1B0GTQ4 84 aa9.57□□□□□ -0.88
TNIP1-201ENST00000315050 IGHV4-39P01824 125 aa9.57□□□□□ -0.88
TNIP1-201ENST00000315050 RNASE3P12724 160 aaKnown RBP9.57□□□□□ -0.88
TNIP1-201ENST00000315050 EDN2P20800 178 aa9.57□□□□□ -0.88
TNIP1-201ENST00000315050 EMP1P54849 157 aa9.57□□□□□ -0.88
TNIP1-201ENST00000315050 BLCAPP62952 87 aa9.57□□□□□ -0.88
TNIP1-201ENST00000315050 WFDC2Q14508 124 aa9.57□□□□□ -0.88
TNIP1-201ENST00000315050 Q6ZS46 218 aa9.57□□□□□ -0.88
TNIP1-201ENST00000315050 PRSS29PA6NIE9 313 aa9.57□□□□□ -0.88
TNIP1-201ENST00000315050 C20orf78Q9BR46 151 aa9.57□□□□□ -0.88
TNIP1-201ENST00000315050 RHPN1-AS1Q9BWJ2 59 aa9.57□□□□□ -0.88
TNIP1-201ENST00000315050 H3BUX3 64 aa9.56□□□□□ -0.88
TNIP1-201ENST00000315050 FOXI2Q6ZQN5 318 aa9.56□□□□□ -0.88
TNIP1-201ENST00000315050 PRADC1Q9BSG0 188 aa9.56□□□□□ -0.88
TNIP1-201ENST00000315050 JPT2Q9H910 190 aa9.56□□□□□ -0.88
TNIP1-201ENST00000315050 RNF223E7ERA6 249 aa9.56□□□□□ -0.88
TNIP1-201ENST00000315050 CLUHP3Q96NS8 147 aa9.56□□□□□ -0.88
TNIP1-201ENST00000315050 TRBV7-3A0A075B6L6 115 aa9.55□□□□□ -0.88
TNIP1-201ENST00000315050 IGHV4-61A0A0C4DH41 118 aa9.55□□□□□ -0.88
TNIP1-201ENST00000315050 DUSP14O95147 198 aaKnown RBP9.55□□□□□ -0.88
TNIP1-201ENST00000315050 TAL2Q16559 108 aa9.55□□□□□ -0.88
TNIP1-201ENST00000315050 CSMD2Q7Z408 3487 aa9.55□□□□□ -0.88
TNIP1-201ENST00000315050 CSPG4Q6UVK1 2322 aa9.55□□□□□ -0.88
TNIP1-201ENST00000315050 SCGB1D4Q6XE38 83 aa9.55□□□□□ -0.88
TNIP1-201ENST00000315050 A0A087WWL8 130 aa9.54□□□□□ -0.88
TNIP1-201ENST00000315050 ZNF815PA8K554 130 aa9.54□□□□□ -0.88
TNIP1-201ENST00000315050 CIDEAO60543 219 aa9.54□□□□□ -0.88
TNIP1-201ENST00000315050 LGALS1P09382 135 aaKnown RBP9.54□□□□□ -0.88
TNIP1-201ENST00000315050 SLC25A16P16260 332 aa9.54□□□□□ -0.88
TNIP1-201ENST00000315050 CD300EQ496F6 205 aaPredicted RBP9.54□□□□□ -0.88
TNIP1-201ENST00000315050 SFTA2Q6UW10 78 aa9.54□□□□□ -0.88
TNIP1-201ENST00000315050 SH2D6Q7Z4S9 175 aa9.54□□□□□ -0.88
TNIP1-201ENST00000315050 KLHL30-AS1Q8NEE0 82 aa9.54□□□□□ -0.88
TNIP1-201ENST00000315050 ATP6V0BQ99437 205 aa9.54□□□□□ -0.88
TNIP1-201ENST00000315050 ETDBQ3ZM63 59 aa9.54□□□□□ -0.88
TNIP1-201ENST00000315050 MUC4Q99102 2169 aa9.54□□□□□ -0.88
TNIP1-201ENST00000315050 F5H697 171 aa9.53□□□□□ -0.88
TNIP1-201ENST00000315050 CRIP2P52943 208 aaPredicted RBP9.53□□□□□ -0.88
TNIP1-201ENST00000315050 RRN3P1Q2M238 152 aa9.53□□□□□ -0.88
TNIP1-201ENST00000315050 PLEKHB2Q96CS7 222 aa9.53□□□□□ -0.88
TNIP1-201ENST00000315050 TP53TG1Q9Y2A0 90 aa9.53□□□□□ -0.88
TNIP1-201ENST00000315050 IGHG2P01859 326 aa9.52□□□□□ -0.88
TNIP1-201ENST00000315050 RPL39P62891 51 aaKnown RBP9.52□□□□□ -0.88
TNIP1-201ENST00000315050 FAM159AQ6UWV7 190 aa9.52□□□□□ -0.88
TNIP1-201ENST00000315050 USMG5Q96IX5 58 aa9.52□□□□□ -0.88
TNIP1-201ENST00000315050 FAM19A4Q96LR4 140 aa9.52□□□□□ -0.88
TNIP1-201ENST00000315050 TRAV12-3A0A0B4J271 114 aa9.52□□□□□ -0.89
TNIP1-201ENST00000315050 IGKV3-20P01619 116 aa9.52□□□□□ -0.89
TNIP1-201ENST00000315050 SRSF9Q13242 221 aaKnown RBP eCLIP9.52□□□□□ -0.89
TNIP1-201ENST00000315050 TMEM95Q3KNT9 176 aa9.52□□□□□ -0.89
TNIP1-201ENST00000315050 FAM74A4Q5TZK3 123 aa9.52□□□□□ -0.89
TNIP1-201ENST00000315050 DAZ1Q9NQZ3 744 aaKnown RBP9.52□□□□□ -0.89
TNIP1-201ENST00000315050 F8W1H4 67 aa9.52□□□□□ -0.89
TNIP1-201ENST00000315050 CD7P09564 240 aa9.52□□□□□ -0.89
TNIP1-201ENST00000315050 GTSF1LQ9H1H1 148 aa9.52□□□□□ -0.89
TNIP1-201ENST00000315050 PGPEP1Q9NXJ5 209 aa9.52□□□□□ -0.89
TNIP1-201ENST00000315050 CREBBPQ92793 2442 aa9.51□□□□□ -0.89
TNIP1-201ENST00000315050 HOXA3O43365 443 aaPredicted RBP9.51□□□□□ -0.89
TNIP1-201ENST00000315050 CRYGDP07320 174 aa9.51□□□□□ -0.89
TNIP1-201ENST00000315050 GNLYP22749 145 aa9.51□□□□□ -0.89
TNIP1-201ENST00000315050 C11orf86A6NJI1 115 aa9.51□□□□□ -0.89
TNIP1-201ENST00000315050 SPANXB1Q9NS25 103 aaPredicted RBP9.51□□□□□ -0.89
TNIP1-201ENST00000315050 MRPL16Q9NX20 251 aaKnown RBP9.51□□□□□ -0.89
TNIP1-201ENST00000315050 SORL1Q92673 2214 aa9.5□□□□□ -0.89
TNIP1-201ENST00000315050 TSHBP01222 138 aa9.5□□□□□ -0.89
TNIP1-201ENST00000315050 LINC00315P59091 139 aa9.5□□□□□ -0.89
TNIP1-201ENST00000315050 SMAGPQ0VAQ4 97 aa9.5□□□□□ -0.89
TNIP1-201ENST00000315050 GAGE13Q4V321 117 aa9.5□□□□□ -0.89
TNIP1-201ENST00000315050 SUMO4Q6EEV6 95 aa9.5□□□□□ -0.89
TNIP1-201ENST00000315050 PIMREGQ9BSJ6 248 aa9.5□□□□□ -0.89
TNIP1-201ENST00000315050 TSSC4Q9Y5U2 329 aaPredicted RBP9.5□□□□□ -0.89
TNIP1-201ENST00000315050 PPP1R17O96001 155 aa9.5□□□□□ -0.89
TNIP1-201ENST00000315050 MED14OSP0DP75 135 aa9.5□□□□□ -0.89
TNIP1-201ENST00000315050 MORN3Q6PF18 240 aaPredicted RBP9.5□□□□□ -0.89
TNIP1-201ENST00000315050 KIF25-AS1Q9Y6Z4 181 aa9.5□□□□□ -0.89
TNIP1-201ENST00000315050 DOPEY2Q9Y3R5 2298 aa9.49□□□□□ -0.89
TNIP1-201ENST00000315050 TRAV12-2A0A075B6T6 113 aa9.49□□□□□ -0.89
TNIP1-201ENST00000315050 LINC01549A6NIU2 74 aa9.49□□□□□ -0.89
TNIP1-201ENST00000315050 ZFP2Q6ZN57 461 aa9.49□□□□□ -0.89
TNIP1-201ENST00000315050 APRG1Q8IVJ8 170 aa9.49□□□□□ -0.89
TNIP1-201ENST00000315050 APOMO95445 188 aa9.49□□□□□ -0.89
TNIP1-201ENST00000315050 ZNF688P0C7X2 276 aa9.49□□□□□ -0.89
TNIP1-201ENST00000315050 ZNF256Q9Y2P7 627 aaPredicted RBP9.49□□□□□ -0.89
TNIP1-201ENST00000315050 IGLV4-69A0A075B6H9 119 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms