RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 HOXB4P17483 251 aaPredicted RBP10.83□□□□□ -0.68
ZNF541-202ENST00000314121 NOTCH2Q04721 2471 aa10.83□□□□□ -0.68
ZNF541-202ENST00000314121 F6UB75 175 aa10.83□□□□□ -0.68
ZNF541-202ENST00000314121 GNRH2O43555 120 aa10.83□□□□□ -0.68
ZNF541-202ENST00000314121 CTRLP40313 264 aa10.83□□□□□ -0.68
ZNF541-202ENST00000314121 HIGD1BQ9P298 99 aa10.83□□□□□ -0.68
ZNF541-202ENST00000314121 TNRC6AQ8NDV7 1962 aaKnown RBP10.82□□□□□ -0.68
ZNF541-202ENST00000314121 SPATA12Q7Z6I5 190 aa10.82□□□□□ -0.68
ZNF541-202ENST00000314121 TEX48A0A1B0GUV7 120 aa10.82□□□□□ -0.68
ZNF541-202ENST00000314121 GRNP28799 593 aaKnown RBP10.82□□□□□ -0.68
ZNF541-202ENST00000314121 TCTEX1D4Q5JR98 221 aa10.82□□□□□ -0.68
ZNF541-202ENST00000314121 SPANXA1Q9NS26 97 aa10.82□□□□□ -0.68
ZNF541-202ENST00000314121 IGLL5B9A064 214 aa10.82□□□□□ -0.68
ZNF541-202ENST00000314121 MBD6Q96DN6 1003 aa10.82□□□□□ -0.68
ZNF541-202ENST00000314121 S100A7L2Q5SY68 101 aa10.81□□□□□ -0.68
ZNF541-202ENST00000314121 MLST8Q9BVC4 326 aa10.81□□□□□ -0.68
ZNF541-202ENST00000314121 XCL2Q9UBD3 114 aa10.81□□□□□ -0.68
ZNF541-202ENST00000314121 OTOGLQ3ZCN5 2332 aa10.81□□□□□ -0.68
ZNF541-202ENST00000314121 RHOHQ15669 191 aa10.81□□□□□ -0.68
ZNF541-202ENST00000314121 JPT2Q9H910 190 aa10.81□□□□□ -0.68
ZNF541-202ENST00000314121 C10orf142B7Z368 130 aa10.8□□□□□ -0.68
ZNF541-202ENST00000314121 FXYD2P54710 66 aa10.8□□□□□ -0.68
ZNF541-202ENST00000314121 LINC00322Q6ZN03 302 aaPredicted RBP10.8□□□□□ -0.68
ZNF541-202ENST00000314121 UTF1Q5T230 341 aa10.8□□□□□ -0.68
ZNF541-202ENST00000314121 CITED1Q99966 193 aa10.8□□□□□ -0.68
ZNF541-202ENST00000314121 FOXI2Q6ZQN5 318 aa10.8□□□□□ -0.68
ZNF541-202ENST00000314121 Q8N9W7 124 aa10.8□□□□□ -0.68
ZNF541-202ENST00000314121 C2CD3Q4AC94 2353 aa10.8□□□□□ -0.68
ZNF541-202ENST00000314121 GDF5OSQ5U4N7 250 aa10.8□□□□□ -0.68
ZNF541-202ENST00000314121 TTTY13Q9BZ97 58 aa10.8□□□□□ -0.68
ZNF541-202ENST00000314121 IGHV3-16A0A0C4DH30 117 aa10.79□□□□□ -0.68
ZNF541-202ENST00000314121 TP53TG3Q9ULZ0 132 aa10.79□□□□□ -0.68
ZNF541-202ENST00000314121 PRAC2D3DTV9 90 aa10.79□□□□□ -0.68
ZNF541-202ENST00000314121 SPRY2O43597 315 aa10.79□□□□□ -0.68
ZNF541-202ENST00000314121 INAFM2P0DMQ5 153 aa10.79□□□□□ -0.68
ZNF541-202ENST00000314121 RPL35AP18077 110 aaKnown RBP10.78□□□□□ -0.68
ZNF541-202ENST00000314121 C1orf229Q6ZS94 237 aaPredicted RBP10.78□□□□□ -0.68
ZNF541-202ENST00000314121 MUC22E2RYF6 1773 aaPredicted RBP10.78□□□□□ -0.68
ZNF541-202ENST00000314121 CFC1BP0CG36 223 aa10.78□□□□□ -0.68
ZNF541-202ENST00000314121 CFC1P0CG37 223 aa10.78□□□□□ -0.68
ZNF541-202ENST00000314121 RPL39LQ96EH5 51 aaKnown RBP10.78□□□□□ -0.68
ZNF541-202ENST00000314121 SH2D6Q7Z4S9 175 aa10.78□□□□□ -0.68
ZNF541-202ENST00000314121 C11orf68Q9H3H3 251 aaKnown RBP10.78□□□□□ -0.68
ZNF541-202ENST00000314121 ZNRF2Q8NHG8 242 aa10.78□□□□□ -0.68
ZNF541-202ENST00000314121 ELANEP08246 267 aa10.77□□□□□ -0.68
ZNF541-202ENST00000314121 FANCD2OSQ96PS1 177 aa10.77□□□□□ -0.68
ZNF541-202ENST00000314121 GAGE12JA6NER3 117 aa10.77□□□□□ -0.69
ZNF541-202ENST00000314121 GAGE4Q13068 117 aa10.77□□□□□ -0.69
ZNF541-202ENST00000314121 GAGE5Q13069 117 aa10.77□□□□□ -0.69
ZNF541-202ENST00000314121 ODF1Q14990 250 aa10.77□□□□□ -0.69
ZNF541-202ENST00000314121 DNAJC30Q96LL9 226 aa10.77□□□□□ -0.69
ZNF541-202ENST00000314121 PTPN13Q12923 2485 aa10.77□□□□□ -0.69
ZNF541-202ENST00000314121 LINC01619G3V211 115 aa10.77□□□□□ -0.69
ZNF541-202ENST00000314121 NSUN5P1Q3KNT7 163 aa10.77□□□□□ -0.69
ZNF541-202ENST00000314121 C16orf54Q6UWD8 224 aa10.77□□□□□ -0.69
ZNF541-202ENST00000314121 GAGE2AQ6NT46 116 aa10.77□□□□□ -0.69
ZNF541-202ENST00000314121 IGHV3-38A0A0C4DH36 116 aa10.76□□□□□ -0.69
ZNF541-202ENST00000314121 C9orf47Q6ZRZ4 202 aa10.76□□□□□ -0.69
ZNF541-202ENST00000314121 Q8N7P7 452 aa10.76□□□□□ -0.69
ZNF541-202ENST00000314121 TRAV12-1A0A0B4J245 112 aa10.76□□□□□ -0.69
ZNF541-202ENST00000314121 B5MCH6 92 aa10.76□□□□□ -0.69
ZNF541-202ENST00000314121 HIST1H4AP62805 103 aaKnown RBP10.75□□□□□ -0.69
ZNF541-202ENST00000314121 NTN5Q8WTR8 489 aaPredicted RBP10.75□□□□□ -0.69
ZNF541-202ENST00000314121 RNF223E7ERA6 249 aa10.75□□□□□ -0.69
ZNF541-202ENST00000314121 DAZAP2Q15038 168 aaPredicted RBP10.75□□□□□ -0.69
ZNF541-202ENST00000314121 PIEZO2Q9H5I5 2752 aa10.75□□□□□ -0.69
ZNF541-202ENST00000314121 VWC2LB2RUY7 222 aa10.75□□□□□ -0.69
ZNF541-202ENST00000314121 SS18Q15532 418 aa10.75□□□□□ -0.69
ZNF541-202ENST00000314121 SPAG8Q99932 426 aaPredicted RBP10.75□□□□□ -0.69
ZNF541-202ENST00000314121 SS18L2Q9UHA2 77 aa10.75□□□□□ -0.69
ZNF541-202ENST00000314121 WFDC2Q14508 124 aa10.74□□□□□ -0.69
ZNF541-202ENST00000314121 ZFP2Q6ZN57 461 aa10.74□□□□□ -0.69
ZNF541-202ENST00000314121 LOXL1Q08397 574 aaPredicted RBP10.74□□□□□ -0.69
ZNF541-202ENST00000314121 DEFB130BP0DP73 79 aa10.73□□□□□ -0.69
ZNF541-202ENST00000314121 DEFB130AP0DP74 79 aa10.73□□□□□ -0.69
ZNF541-202ENST00000314121 HERVK_113P63121 156 aa10.73□□□□□ -0.69
ZNF541-202ENST00000314121 TMEM243Q9BU79 118 aa10.73□□□□□ -0.69
ZNF541-202ENST00000314121 J3QLI3 93 aa10.73□□□□□ -0.69
ZNF541-202ENST00000314121 CARD19Q96LW7 228 aa10.73□□□□□ -0.69
ZNF541-202ENST00000314121 LAMTOR3Q9UHA4 124 aa10.73□□□□□ -0.69
ZNF541-202ENST00000314121 NACAE9PAV3 2078 aa10.73□□□□□ -0.69
ZNF541-202ENST00000314121 HCFC1P51610 2035 aa10.73□□□□□ -0.69
ZNF541-202ENST00000314121 NBL1P41271 181 aa10.73□□□□□ -0.69
ZNF541-202ENST00000314121 SUMO4Q6EEV6 95 aa10.73□□□□□ -0.69
ZNF541-202ENST00000314121 MAPK1IP1LQ8NDC0 245 aa10.73□□□□□ -0.69
ZNF541-202ENST00000314121 NUP210LQ5VU65 1888 aa10.72□□□□□ -0.69
ZNF541-202ENST00000314121 E9PLD3 99 aa10.72□□□□□ -0.69
ZNF541-202ENST00000314121 AJUBAQ96IF1 538 aa10.72□□□□□ -0.69
ZNF541-202ENST00000314121 EDA2RQ9HAV5 297 aa10.72□□□□□ -0.69
ZNF541-202ENST00000314121 RBX1P62877 108 aa10.72□□□□□ -0.69
ZNF541-202ENST00000314121 C9orf153Q5TBE3 101 aa10.72□□□□□ -0.69
ZNF541-202ENST00000314121 RNASE13Q5GAN3 156 aaKnown RBP10.72□□□□□ -0.69
ZNF541-202ENST00000314121 TLN1Q9Y490 2541 aaKnown RBP10.71□□□□□ -0.69
ZNF541-202ENST00000314121 GAGE7O76087 117 aa10.71□□□□□ -0.69
ZNF541-202ENST00000314121 GAGE12FP0CL80 117 aa10.71□□□□□ -0.69
ZNF541-202ENST00000314121 GAGE12GP0CL81 117 aa10.71□□□□□ -0.69
ZNF541-202ENST00000314121 GAGE12IP0CL82 117 aa10.71□□□□□ -0.69
ZNF541-202ENST00000314121 GAGE6Q13070 117 aa10.71□□□□□ -0.69
ZNF541-202ENST00000314121 C5orf56Q8N8D9 126 aa10.71□□□□□ -0.69
ZNF541-202ENST00000314121 IFITM1P13164 125 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms