RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 PRAC2D3DTV9 90 aa13.87□□□□□ -0.19
SPSB4-201ENST00000310546 SPANXN1Q5VSR9 72 aa13.87□□□□□ -0.19
SPSB4-201ENST00000310546 IGFBPL1Q8WX77 278 aa13.87□□□□□ -0.19
SPSB4-201ENST00000310546 SLC25A20O43772 301 aa13.87□□□□□ -0.19
SPSB4-201ENST00000310546 IFITM1P13164 125 aa13.87□□□□□ -0.19
SPSB4-201ENST00000310546 EMP1P54849 157 aa13.87□□□□□ -0.19
SPSB4-201ENST00000310546 NEXN-AS1Q8NBZ9 246 aa13.87□□□□□ -0.19
SPSB4-201ENST00000310546 CRIP2P52943 208 aaPredicted RBP13.86□□□□□ -0.19
SPSB4-201ENST00000310546 C3orf36Q3SXR2 165 aa13.86□□□□□ -0.19
SPSB4-201ENST00000310546 RAX2Q96IS3 184 aa13.86□□□□□ -0.19
SPSB4-201ENST00000310546 C11orf21Q9P2W6 132 aa13.86□□□□□ -0.19
SPSB4-201ENST00000310546 CELSR2Q9HCU4 2923 aa13.86□□□□□ -0.19
SPSB4-201ENST00000310546 COX7A1P24310 79 aa13.86□□□□□ -0.19
SPSB4-201ENST00000310546 RNF182Q8N6D2 247 aa13.86□□□□□ -0.19
SPSB4-201ENST00000310546 CFC1BP0CG36 223 aa13.85□□□□□ -0.19
SPSB4-201ENST00000310546 CFC1P0CG37 223 aa13.85□□□□□ -0.19
SPSB4-201ENST00000310546 RASL10AQ92737 203 aa13.85□□□□□ -0.19
SPSB4-201ENST00000310546 PSMG3-AS1Q96PY0 264 aa13.85□□□□□ -0.19
SPSB4-201ENST00000310546 PRORYQ9H606 182 aa13.85□□□□□ -0.19
SPSB4-201ENST00000310546 LYNX1G3V0Z9 82 aa13.85□□□□□ -0.19
SPSB4-201ENST00000310546 H7C2G1 150 aa13.85□□□□□ -0.19
SPSB4-201ENST00000310546 LYNX1P0DP58 116 aa13.85□□□□□ -0.19
SPSB4-201ENST00000310546 DLX6P56179 175 aa13.85□□□□□ -0.19
SPSB4-201ENST00000310546 TRPT1Q86TN4 253 aaKnown RBP13.85□□□□□ -0.19
SPSB4-201ENST00000310546 SBSPONQ8IVN8 264 aa13.85□□□□□ -0.19
SPSB4-201ENST00000310546 SMIM2Q9BVW6 85 aa13.85□□□□□ -0.19
SPSB4-201ENST00000310546 TMEM155Q4W5P6 130 aa13.84□□□□□ -0.19
SPSB4-201ENST00000310546 SMAD5-AS1Q9Y6J3 95 aa13.84□□□□□ -0.19
SPSB4-201ENST00000310546 LY6HO94772 140 aa13.84□□□□□ -0.19
SPSB4-201ENST00000310546 FAM159AQ6UWV7 190 aa13.84□□□□□ -0.19
SPSB4-201ENST00000310546 BAALCQ8WXS3 180 aa13.84□□□□□ -0.19
SPSB4-201ENST00000310546 Q6ZQT7 251 aa13.84□□□□□ -0.19
SPSB4-201ENST00000310546 C10orf126Q8N4M7 172 aa13.84□□□□□ -0.19
SPSB4-201ENST00000310546 TMEM178BH3BS89 294 aa13.83□□□□□ -0.2
SPSB4-201ENST00000310546 SRSF2Q01130 221 aaKnown RBP13.83□□□□□ -0.2
SPSB4-201ENST00000310546 RAB1BQ9H0U4 201 aa13.83□□□□□ -0.2
SPSB4-201ENST00000310546 C17orf100A8MU93 164 aa13.83□□□□□ -0.2
SPSB4-201ENST00000310546 SPRY2O43597 315 aa13.83□□□□□ -0.2
SPSB4-201ENST00000310546 COX6B1P14854 86 aa13.83□□□□□ -0.2
SPSB4-201ENST00000310546 Q6ZS46 218 aa13.83□□□□□ -0.2
SPSB4-201ENST00000310546 ARHGAP32A7KAX9 2087 aa13.83□□□□□ -0.2
SPSB4-201ENST00000310546 MFAP4P55083 255 aa13.82□□□□□ -0.2
SPSB4-201ENST00000310546 TMEM95Q3KNT9 176 aa13.82□□□□□ -0.2
SPSB4-201ENST00000310546 DEFB104AQ8WTQ1 72 aa13.82□□□□□ -0.2
SPSB4-201ENST00000310546 TOMM6Q96B49 74 aa13.82□□□□□ -0.2
SPSB4-201ENST00000310546 BUB1B-PAK6H3BSN5 160 aa13.82□□□□□ -0.2
SPSB4-201ENST00000310546 ORMDL2Q53FV1 153 aa13.82□□□□□ -0.2
SPSB4-201ENST00000310546 C2orf66Q6UXQ4 117 aa13.82□□□□□ -0.2
SPSB4-201ENST00000310546 C1orf122Q6ZSJ8 110 aa13.82□□□□□ -0.2
SPSB4-201ENST00000310546 A0A0J9YY99 117 aa13.81□□□□□ -0.2
SPSB4-201ENST00000310546 SCGB2A1O75556 95 aa13.81□□□□□ -0.2
SPSB4-201ENST00000310546 NTN5Q8WTR8 489 aaPredicted RBP13.81□□□□□ -0.2
SPSB4-201ENST00000310546 ASIPP42127 132 aa13.81□□□□□ -0.2
SPSB4-201ENST00000310546 KLRB1Q12918 225 aa13.81□□□□□ -0.2
SPSB4-201ENST00000310546 PRO1854Q9UHT4 67 aa13.81□□□□□ -0.2
SPSB4-201ENST00000310546 IGLV1-47P01700 117 aa13.8□□□□□ -0.2
SPSB4-201ENST00000310546 ADIPOQQ15848 244 aa13.8□□□□□ -0.2
SPSB4-201ENST00000310546 ZNF672Q499Z4 452 aaPredicted RBP13.8□□□□□ -0.2
SPSB4-201ENST00000310546 IGHV7-4-1A0A0J9YVY3 117 aa13.8□□□□□ -0.2
SPSB4-201ENST00000310546 SUMO2P61956 95 aaKnown RBP13.8□□□□□ -0.2
SPSB4-201ENST00000310546 RPL39LQ96EH5 51 aaKnown RBP13.8□□□□□ -0.2
SPSB4-201ENST00000310546 IGHV3-66A0A0C4DH42 116 aa13.79□□□□□ -0.2
SPSB4-201ENST00000310546 ARL3P36405 182 aa13.79□□□□□ -0.2
SPSB4-201ENST00000310546 ZFHX3Q15911 3703 aa13.79□□□□□ -0.2
SPSB4-201ENST00000310546 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.79□□□□□ -0.2
SPSB4-201ENST00000310546 C21orf62Q9NYP8 219 aa13.79□□□□□ -0.2
SPSB4-201ENST00000310546 IGHV3OR16-13A0A075B7E8 117 aa13.78□□□□□ -0.2
SPSB4-201ENST00000310546 IGHV3-74A0A0B4J1X5 117 aa13.78□□□□□ -0.2
SPSB4-201ENST00000310546 BRI3O95415 125 aa13.78□□□□□ -0.2
SPSB4-201ENST00000310546 IGHV3-30P01768 117 aa13.78□□□□□ -0.2
SPSB4-201ENST00000310546 IGHV3-30-5P0DP03 117 aa13.78□□□□□ -0.2
SPSB4-201ENST00000310546 Q8N1Y9 231 aa13.78□□□□□ -0.2
SPSB4-201ENST00000310546 C3orf56Q8N813 242 aa13.78□□□□□ -0.2
SPSB4-201ENST00000310546 NUP37Q8NFH4 326 aa13.78□□□□□ -0.2
SPSB4-201ENST00000310546 TEX49A0A1B0GTD5 131 aa13.78□□□□□ -0.2
SPSB4-201ENST00000310546 F8W735 103 aaPredicted RBP13.78□□□□□ -0.2
SPSB4-201ENST00000310546 M0R381 172 aa13.78□□□□□ -0.2
SPSB4-201ENST00000310546 CLEC3BP05452 202 aa13.78□□□□□ -0.2
SPSB4-201ENST00000310546 DYNLRB1Q9NP97 96 aa13.78□□□□□ -0.2
SPSB4-201ENST00000310546 HIF1ANQ9NWT6 349 aa13.78□□□□□ -0.2
SPSB4-201ENST00000310546 C11orf86A6NJI1 115 aa13.77□□□□□ -0.2
SPSB4-201ENST00000310546 TIMM23O14925 209 aa13.77□□□□□ -0.2
SPSB4-201ENST00000310546 FANCD2OSQ96PS1 177 aa13.77□□□□□ -0.2
SPSB4-201ENST00000310546 J3KRW8 73 aa13.77□□□□□ -0.21
SPSB4-201ENST00000310546 MEIG1Q5JSS6 88 aa13.77□□□□□ -0.21
SPSB4-201ENST00000310546 AGPAT4-IT1Q9H0P7 198 aa13.77□□□□□ -0.21
SPSB4-201ENST00000310546 C15orf53Q8NAA6 179 aa13.77□□□□□ -0.21
SPSB4-201ENST00000310546 ABCA12Q86UK0 2595 aa13.76□□□□□ -0.21
SPSB4-201ENST00000310546 USP9YO00507 2555 aaPredicted RBP13.76□□□□□ -0.21
SPSB4-201ENST00000310546 E7EQL1 145 aa13.76□□□□□ -0.21
SPSB4-201ENST00000310546 ADORA2A-AS1P86434 159 aa13.76□□□□□ -0.21
SPSB4-201ENST00000310546 IGHV4-39P01824 125 aa13.75□□□□□ -0.21
SPSB4-201ENST00000310546 BEX4Q9NWD9 120 aaPredicted RBP13.75□□□□□ -0.21
SPSB4-201ENST00000310546 CENPVL3A0A0U1RRI6 287 aa13.75□□□□□ -0.21
SPSB4-201ENST00000310546 DUSP14O95147 198 aaKnown RBP13.75□□□□□ -0.21
SPSB4-201ENST00000310546 HERVK_113P61574 105 aa13.75□□□□□ -0.21
SPSB4-201ENST00000310546 HES1Q14469 280 aa13.75□□□□□ -0.21
SPSB4-201ENST00000310546 TMEM170BQ5T4T1 132 aa13.75□□□□□ -0.21
SPSB4-201ENST00000310546 SLC50A1Q9BRV3 221 aa13.75□□□□□ -0.21
SPSB4-201ENST00000310546 TSPEAR-AS2P59090 65 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms