RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 RBFOX3A6NFN3 312 aa13.87□□□□□ -0.19
VEGFB-201ENST00000309422 SFTA3P0C7M3 94 aa13.87□□□□□ -0.19
VEGFB-201ENST00000309422 DERL1Q9BUN8 251 aa13.87□□□□□ -0.19
VEGFB-201ENST00000309422 A8MWV9 139 aa13.86□□□□□ -0.19
VEGFB-201ENST00000309422 RNASE3P12724 160 aaKnown RBP13.86□□□□□ -0.19
VEGFB-201ENST00000309422 CRIP1P50238 77 aa13.86□□□□□ -0.19
VEGFB-201ENST00000309422 PTH2Q96A98 100 aa13.86□□□□□ -0.19
VEGFB-201ENST00000309422 ZNF479Q96JC4 524 aa13.86□□□□□ -0.19
VEGFB-201ENST00000309422 XKRY2A2RUG3 117 aa13.85□□□□□ -0.19
VEGFB-201ENST00000309422 GRIFINA4D1Z8 144 aa13.85□□□□□ -0.19
VEGFB-201ENST00000309422 SRIP30626 198 aa13.85□□□□□ -0.19
VEGFB-201ENST00000309422 CRYBA4P53673 196 aa13.85□□□□□ -0.19
VEGFB-201ENST00000309422 MRPL23Q16540 153 aaKnown RBP13.85□□□□□ -0.19
VEGFB-201ENST00000309422 ZNF506Q5JVG8 444 aa13.85□□□□□ -0.19
VEGFB-201ENST00000309422 PIK3CD-AS1Q5SR53 167 aa13.85□□□□□ -0.19
VEGFB-201ENST00000309422 MLST8Q9BVC4 326 aa13.85□□□□□ -0.19
VEGFB-201ENST00000309422 TMEM250H0YL14 139 aa13.84□□□□□ -0.19
VEGFB-201ENST00000309422 ARMS2P0C7Q2 107 aa13.84□□□□□ -0.19
VEGFB-201ENST00000309422 CEBPGP53567 150 aa13.84□□□□□ -0.19
VEGFB-201ENST00000309422 FHL2Q14192 279 aa13.84□□□□□ -0.19
VEGFB-201ENST00000309422 TOR2AQ5JU69 321 aa13.84□□□□□ -0.19
VEGFB-201ENST00000309422 ZFP82Q8N141 532 aa13.84□□□□□ -0.19
VEGFB-201ENST00000309422 PRADC1Q9BSG0 188 aa13.84□□□□□ -0.19
VEGFB-201ENST00000309422 CXCL1P09341 107 aa13.83□□□□□ -0.19
VEGFB-201ENST00000309422 RPS20P60866 119 aaKnown RBP13.83□□□□□ -0.19
VEGFB-201ENST00000309422 DNLZQ5SXM8 178 aa13.83□□□□□ -0.19
VEGFB-201ENST00000309422 RHODO00212 210 aa13.83□□□□□ -0.2
VEGFB-201ENST00000309422 P01737 135 aa13.83□□□□□ -0.2
VEGFB-201ENST00000309422 MED14OSP0DP75 135 aa13.83□□□□□ -0.2
VEGFB-201ENST00000309422 TEX261Q6UWH6 196 aa13.83□□□□□ -0.2
VEGFB-201ENST00000309422 LYPD6BQ8NI32 183 aa13.83□□□□□ -0.2
VEGFB-201ENST00000309422 VSIG2Q96IQ7 327 aa13.83□□□□□ -0.2
VEGFB-201ENST00000309422 RAB19A4D1S5 217 aa13.82□□□□□ -0.2
VEGFB-201ENST00000309422 PGPEP1LA6NFU8 196 aa13.82□□□□□ -0.2
VEGFB-201ENST00000309422 M0R381 172 aa13.82□□□□□ -0.2
VEGFB-201ENST00000309422 RS1O15537 224 aa13.82□□□□□ -0.2
VEGFB-201ENST00000309422 RHOHQ15669 191 aa13.82□□□□□ -0.2
VEGFB-201ENST00000309422 CFAP126Q5VTH2 177 aa13.82□□□□□ -0.2
VEGFB-201ENST00000309422 SH2D6Q7Z4S9 175 aa13.82□□□□□ -0.2
VEGFB-201ENST00000309422 VPS13DQ5THJ4 4388 aa13.81□□□□□ -0.2
VEGFB-201ENST00000309422 GYPEP15421 78 aa13.81□□□□□ -0.2
VEGFB-201ENST00000309422 A0A096LPF7 62 aa13.8□□□□□ -0.2
VEGFB-201ENST00000309422 RPL19P84098 196 aaKnown RBP13.8□□□□□ -0.2
VEGFB-201ENST00000309422 SPANXN1Q5VSR9 72 aa13.8□□□□□ -0.2
VEGFB-201ENST00000309422 ZFP2Q6ZN57 461 aa13.8□□□□□ -0.2
VEGFB-201ENST00000309422 NEGR1Q7Z3B1 354 aa13.8□□□□□ -0.2
VEGFB-201ENST00000309422 OR2D3Q8NGH3 330 aa13.8□□□□□ -0.2
VEGFB-201ENST00000309422 FAM210AQ96ND0 272 aa13.8□□□□□ -0.2
VEGFB-201ENST00000309422 PARLQ9H300 379 aa13.8□□□□□ -0.2
VEGFB-201ENST00000309422 IGLV2-18A0A075B6J9 118 aa13.79□□□□□ -0.2
VEGFB-201ENST00000309422 IGHV3-73A0A0B4J1V6 119 aa13.79□□□□□ -0.2
VEGFB-201ENST00000309422 SOHLH1Q5JUK2 328 aa13.79□□□□□ -0.2
VEGFB-201ENST00000309422 FAM74A4Q5TZK3 123 aa13.79□□□□□ -0.2
VEGFB-201ENST00000309422 TPPP3Q9BW30 176 aa13.79□□□□□ -0.2
VEGFB-201ENST00000309422 TRBV6-4A0A1B0GX49 114 aa13.78□□□□□ -0.2
VEGFB-201ENST00000309422 NDUFS6O75380 124 aaKnown RBP13.78□□□□□ -0.2
VEGFB-201ENST00000309422 GATA1P15976 413 aaPredicted RBP13.78□□□□□ -0.2
VEGFB-201ENST00000309422 RAB14P61106 215 aa13.78□□□□□ -0.2
VEGFB-201ENST00000309422 LINC00588Q9Y4M8 146 aa13.78□□□□□ -0.2
VEGFB-201ENST00000309422 HYDINQ4G0P3 5121 aa13.78□□□□□ -0.2
VEGFB-201ENST00000309422 K7EQD1 137 aa13.77□□□□□ -0.21
VEGFB-201ENST00000309422 SMIM17P0DL12 118 aa13.77□□□□□ -0.21
VEGFB-201ENST00000309422 TTC32Q5I0X7 151 aa13.77□□□□□ -0.21
VEGFB-201ENST00000309422 MRPS16Q9Y3D3 137 aaKnown RBP13.77□□□□□ -0.21
VEGFB-201ENST00000309422 M0R2N4 97 aa13.76□□□□□ -0.21
VEGFB-201ENST00000309422 DMRTA1Q5VZB9 504 aa13.76□□□□□ -0.21
VEGFB-201ENST00000309422 SMIM7Q9BQ49 75 aa13.76□□□□□ -0.21
VEGFB-201ENST00000309422 SCRT2Q9NQ03 307 aa13.76□□□□□ -0.21
VEGFB-201ENST00000309422 OR5AL1P0C617 328 aa13.75□□□□□ -0.21
VEGFB-201ENST00000309422 SLC25A29Q8N8R3 303 aa13.75□□□□□ -0.21
VEGFB-201ENST00000309422 FER1L6-AS1Q8NA97 138 aa13.75□□□□□ -0.21
VEGFB-201ENST00000309422 UPK3BQ9BT76 320 aa13.75□□□□□ -0.21
VEGFB-201ENST00000309422 IGLV2-8P01709 118 aa13.74□□□□□ -0.21
VEGFB-201ENST00000309422 PEA15Q15121 130 aa13.74□□□□□ -0.21
VEGFB-201ENST00000309422 ESRGQ1W209 222 aa13.74□□□□□ -0.21
VEGFB-201ENST00000309422 AP1S3Q96PC3 154 aa13.74□□□□□ -0.21
VEGFB-201ENST00000309422 DNAH6Q9C0G6 4158 aa13.73□□□□□ -0.21
VEGFB-201ENST00000309422 TRBV20OR9-2A0A075B6H5 130 aa13.73□□□□□ -0.21
VEGFB-201ENST00000309422 A0A1W2PPQ1 181 aa13.73□□□□□ -0.21
VEGFB-201ENST00000309422 ZNF727A8MUV8 499 aa13.73□□□□□ -0.21
VEGFB-201ENST00000309422 ZNRF2Q8NHG8 242 aa13.73□□□□□ -0.21
VEGFB-201ENST00000309422 SFRP2Q96HF1 295 aa13.73□□□□□ -0.21
VEGFB-201ENST00000309422 Q9H8V8 135 aa13.73□□□□□ -0.21
VEGFB-201ENST00000309422 MUC4Q99102 2169 aa13.73□□□□□ -0.21
VEGFB-201ENST00000309422 C19orf71A6NCJ1 209 aa13.72□□□□□ -0.21
VEGFB-201ENST00000309422 SNAI2O43623 268 aa13.72□□□□□ -0.21
VEGFB-201ENST00000309422 CACNG7P62955 275 aa13.72□□□□□ -0.21
VEGFB-201ENST00000309422 OR10AG1Q8NH19 301 aa13.72□□□□□ -0.21
VEGFB-201ENST00000309422 RPP21Q9H633 154 aaKnown RBP13.72□□□□□ -0.21
VEGFB-201ENST00000309422 A0A087WWL8 130 aa13.71□□□□□ -0.21
VEGFB-201ENST00000309422 F2Z2F3 143 aa13.71□□□□□ -0.21
VEGFB-201ENST00000309422 ZNF56Q15929 161 aa13.71□□□□□ -0.21
VEGFB-201ENST00000309422 SMDT1Q9H4I9 107 aa13.71□□□□□ -0.21
VEGFB-201ENST00000309422 LY96Q9Y6Y9 160 aa13.71□□□□□ -0.21
VEGFB-201ENST00000309422 KMT2AQ03164 3969 aa13.71□□□□□ -0.22
VEGFB-201ENST00000309422 NBDYA0A0U1RRE5 68 aa13.71□□□□□ -0.22
VEGFB-201ENST00000309422 NXPH4O95158 308 aa13.71□□□□□ -0.22
VEGFB-201ENST00000309422 ERVFC1-1P60608 527 aa13.71□□□□□ -0.22
VEGFB-201ENST00000309422 SSTP61278 116 aa13.71□□□□□ -0.22
VEGFB-201ENST00000309422 FAM74A3Q4VXF1 159 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms