RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 ZFP36P26651 326 aaKnown RBP12.48□□□□□ -0.41
CCDC8-201ENST00000307522 NDUFV3P56181 108 aaKnown RBP12.48□□□□□ -0.41
CCDC8-201ENST00000307522 SHANK2-AS3Q9BTD1 123 aa12.48□□□□□ -0.41
CCDC8-201ENST00000307522 MTORP42345 2549 aa12.48□□□□□ -0.41
CCDC8-201ENST00000307522 TTC32Q5I0X7 151 aa12.48□□□□□ -0.41
CCDC8-201ENST00000307522 A0A087WX48 190 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 PRAC2D3DTV9 90 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 NXT2Q9NPJ8 142 aaKnown RBP12.47□□□□□ -0.41
CCDC8-201ENST00000307522 IGHV3-49A0A0A0MS15 119 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 GAGE12JA6NER3 117 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 SNCGO76070 127 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 GAGE7O76087 117 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 GAGE12FP0CL80 117 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 GAGE12GP0CL81 117 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 GAGE12IP0CL82 117 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 DLX6P56179 175 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 GAGE4Q13068 117 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 Q6ZS46 218 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 MAPK1IP1LQ8NDC0 245 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 CLEC3BP05452 202 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 ZNF491Q8N8L2 437 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 RAB9BQ9NP90 201 aa12.47□□□□□ -0.41
CCDC8-201ENST00000307522 NOTCH3Q9UM47 2321 aa12.46□□□□□ -0.41
CCDC8-201ENST00000307522 SRSF1Q07955 248 aaKnown RBP eCLIP12.46□□□□□ -0.41
CCDC8-201ENST00000307522 LAGE3Q14657 143 aa12.46□□□□□ -0.42
CCDC8-201ENST00000307522 CFHR4Q92496 578 aa12.46□□□□□ -0.42
CCDC8-201ENST00000307522 TEX15Q9BXT5 2789 aa12.46□□□□□ -0.42
CCDC8-201ENST00000307522 NBPF19A0A087WUL8 3843 aa12.45□□□□□ -0.42
CCDC8-201ENST00000307522 IGHV1-3A0A0C4DH29 117 aa12.45□□□□□ -0.42
CCDC8-201ENST00000307522 DYNAPQ8N1N2 210 aa12.45□□□□□ -0.42
CCDC8-201ENST00000307522 BPESC1Q9GZL8 116 aa12.45□□□□□ -0.42
CCDC8-201ENST00000307522 IL17RELQ6ZVW7 336 aa12.45□□□□□ -0.42
CCDC8-201ENST00000307522 SCGB3A1Q96QR1 104 aa12.45□□□□□ -0.42
CCDC8-201ENST00000307522 FABP5P3A8MUU1 101 aa12.45□□□□□ -0.42
CCDC8-201ENST00000307522 IGHV4-39P01824 125 aa12.45□□□□□ -0.42
CCDC8-201ENST00000307522 TMEM14CQ9P0S9 112 aa12.45□□□□□ -0.42
CCDC8-201ENST00000307522 A6NJY4 79 aa12.44□□□□□ -0.42
CCDC8-201ENST00000307522 H3BRN7 92 aa12.44□□□□□ -0.42
CCDC8-201ENST00000307522 BUB1B-PAK6H3BSN5 160 aa12.44□□□□□ -0.42
CCDC8-201ENST00000307522 ARL3P36405 182 aa12.44□□□□□ -0.42
CCDC8-201ENST00000307522 Q8N8P6 123 aa12.44□□□□□ -0.42
CCDC8-201ENST00000307522 PIFOQ8TCI5 191 aa12.44□□□□□ -0.42
CCDC8-201ENST00000307522 NTN5Q8WTR8 489 aaPredicted RBP12.44□□□□□ -0.42
CCDC8-201ENST00000307522 LINC00527Q9UJ94 153 aa12.44□□□□□ -0.42
CCDC8-201ENST00000307522 FASNP49327 2511 aaKnown RBP12.44□□□□□ -0.42
CCDC8-201ENST00000307522 IGLC6P0CF74 106 aa12.44□□□□□ -0.42
CCDC8-201ENST00000307522 ITLN2Q8WWU7 325 aaPredicted RBP12.44□□□□□ -0.42
CCDC8-201ENST00000307522 TIMD4Q96H15 378 aa12.44□□□□□ -0.42
CCDC8-201ENST00000307522 SIGLEC9Q9Y336 463 aa12.44□□□□□ -0.42
CCDC8-201ENST00000307522 NF1P21359 2839 aa12.44□□□□□ -0.42
CCDC8-201ENST00000307522 ABCA2Q9BZC7 2435 aa12.43□□□□□ -0.42
CCDC8-201ENST00000307522 IGHV3-64A0A075B6Q5 118 aa12.43□□□□□ -0.42
CCDC8-201ENST00000307522 TEX22C9J3V5 150 aa12.43□□□□□ -0.42
CCDC8-201ENST00000307522 I3L2K1 104 aa12.43□□□□□ -0.42
CCDC8-201ENST00000307522 RPL7P18124 248 aaKnown RBP12.43□□□□□ -0.42
CCDC8-201ENST00000307522 PPDPFQ9H3Y8 114 aa12.43□□□□□ -0.42
CCDC8-201ENST00000307522 C11orf21Q9P2W6 132 aa12.43□□□□□ -0.42
CCDC8-201ENST00000307522 TEX49A0A1B0GTD5 131 aa12.43□□□□□ -0.42
CCDC8-201ENST00000307522 TAL2Q16559 108 aa12.43□□□□□ -0.42
CCDC8-201ENST00000307522 OR11H6Q8NGC7 330 aa12.43□□□□□ -0.42
CCDC8-201ENST00000307522 ELANEP08246 267 aa12.43□□□□□ -0.42
CCDC8-201ENST00000307522 PPP1R27Q86WC6 154 aa12.43□□□□□ -0.42
CCDC8-201ENST00000307522 IGLV2-18A0A075B6J9 118 aa12.42□□□□□ -0.42
CCDC8-201ENST00000307522 F8VRH5 84 aa12.42□□□□□ -0.42
CCDC8-201ENST00000307522 ATP6V0E2Q8NHE4 81 aa12.42□□□□□ -0.42
CCDC8-201ENST00000307522 RPL39LQ96EH5 51 aaKnown RBP12.42□□□□□ -0.42
CCDC8-201ENST00000307522 MXRA5Q9NR99 2828 aa12.42□□□□□ -0.42
CCDC8-201ENST00000307522 HELZ2Q9BYK8 2649 aaKnown RBP12.42□□□□□ -0.42
CCDC8-201ENST00000307522 CITED1Q99966 193 aa12.42□□□□□ -0.42
CCDC8-201ENST00000307522 PRORYQ9H606 182 aa12.42□□□□□ -0.42
CCDC8-201ENST00000307522 HECTD1Q9ULT8 2610 aa12.42□□□□□ -0.42
CCDC8-201ENST00000307522 K7EIM0 57 aa12.41□□□□□ -0.42
CCDC8-201ENST00000307522 SLC25A20O43772 301 aa12.41□□□□□ -0.42
CCDC8-201ENST00000307522 MEIG1Q5JSS6 88 aa12.41□□□□□ -0.42
CCDC8-201ENST00000307522 NDUFA11Q86Y39 141 aa12.41□□□□□ -0.42
CCDC8-201ENST00000307522 H7C1H1 209 aa12.41□□□□□ -0.42
CCDC8-201ENST00000307522 IFITM1P13164 125 aa12.41□□□□□ -0.42
CCDC8-201ENST00000307522 PLNP26678 52 aa12.41□□□□□ -0.42
CCDC8-201ENST00000307522 BRD3OSQ6XYD6 125 aa12.41□□□□□ -0.42
CCDC8-201ENST00000307522 FAM110AQ9BQ89 295 aa12.41□□□□□ -0.42
CCDC8-201ENST00000307522 CHCHD5Q9BSY4 110 aa12.41□□□□□ -0.42
CCDC8-201ENST00000307522 RHODO00212 210 aa12.4□□□□□ -0.42
CCDC8-201ENST00000307522 MRPS12O15235 138 aaKnown RBP12.4□□□□□ -0.42
CCDC8-201ENST00000307522 VMO1Q7Z5L0 202 aa12.4□□□□□ -0.42
CCDC8-201ENST00000307522 RASL10AQ92737 203 aa12.4□□□□□ -0.42
CCDC8-201ENST00000307522 INS-IGF2F8WCM5 200 aa12.4□□□□□ -0.42
CCDC8-201ENST00000307522 M0R381 172 aa12.4□□□□□ -0.42
CCDC8-201ENST00000307522 IGLV1-47P01700 117 aa12.4□□□□□ -0.42
CCDC8-201ENST00000307522 SPANXN1Q5VSR9 72 aa12.4□□□□□ -0.42
CCDC8-201ENST00000307522 LINC00574Q9H8X3 128 aa12.4□□□□□ -0.42
CCDC8-201ENST00000307522 KAAG1Q9UBP8 84 aa12.4□□□□□ -0.42
CCDC8-201ENST00000307522 CFC1BP0CG36 223 aa12.39□□□□□ -0.43
CCDC8-201ENST00000307522 CFC1P0CG37 223 aa12.39□□□□□ -0.43
CCDC8-201ENST00000307522 Q1RN00 199 aa12.39□□□□□ -0.43
CCDC8-201ENST00000307522 TMEM219Q86XT9 240 aa12.39□□□□□ -0.43
CCDC8-201ENST00000307522 WNK1Q9H4A3 2382 aa12.39□□□□□ -0.43
CCDC8-201ENST00000307522 IGKV3D-20A0A0C4DH25 116 aa12.39□□□□□ -0.43
CCDC8-201ENST00000307522 UBE2D3P61077 147 aa12.39□□□□□ -0.43
CCDC8-201ENST00000307522 UBE2D2P62837 147 aa12.39□□□□□ -0.43
CCDC8-201ENST00000307522 CD7P09564 240 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms