RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 IGHV7-81A0A0B4J1V7 117 aa11.21□□□□□ -0.61
PTPN9-201ENST00000306726 CEND1Q8N111 149 aa11.21□□□□□ -0.61
PTPN9-201ENST00000306726 PRADC1Q9BSG0 188 aa11.21□□□□□ -0.61
PTPN9-201ENST00000306726 GAGE12HA6NDE8 117 aa11.21□□□□□ -0.62
PTPN9-201ENST00000306726 G3V4G9 280 aa11.21□□□□□ -0.62
PTPN9-201ENST00000306726 OR5A1Q8NGJ0 315 aa11.21□□□□□ -0.62
PTPN9-201ENST00000306726 DPF1Q92782 380 aa11.21□□□□□ -0.62
PTPN9-201ENST00000306726 LINC00574Q9H8X3 128 aa11.21□□□□□ -0.62
PTPN9-201ENST00000306726 ZANQ9Y493 2812 aa11.2□□□□□ -0.62
PTPN9-201ENST00000306726 C2orf66Q6UXQ4 117 aa11.2□□□□□ -0.62
PTPN9-201ENST00000306726 ZFP2Q6ZN57 461 aa11.2□□□□□ -0.62
PTPN9-201ENST00000306726 SYT8Q8NBV8 401 aa11.2□□□□□ -0.62
PTPN9-201ENST00000306726 IGLL5B9A064 214 aa11.2□□□□□ -0.62
PTPN9-201ENST00000306726 IGLV11-55A0A075B6I3 123 aa11.2□□□□□ -0.62
PTPN9-201ENST00000306726 PPBPP02775 128 aa11.19□□□□□ -0.62
PTPN9-201ENST00000306726 RNF185Q96GF1 192 aa11.19□□□□□ -0.62
PTPN9-201ENST00000306726 C11orf71Q6IPW1 123 aa11.19□□□□□ -0.62
PTPN9-201ENST00000306726 KLK9Q9UKQ9 250 aa11.19□□□□□ -0.62
PTPN9-201ENST00000306726 PRSS29PA6NIE9 313 aa11.19□□□□□ -0.62
PTPN9-201ENST00000306726 DUSP14O95147 198 aaKnown RBP11.19□□□□□ -0.62
PTPN9-201ENST00000306726 CRYGBP07316 175 aa11.19□□□□□ -0.62
PTPN9-201ENST00000306726 UNQ9165/PRO28630Q6UXU0 137 aa11.19□□□□□ -0.62
PTPN9-201ENST00000306726 LYPD1Q8N2G4 141 aa11.18□□□□□ -0.62
PTPN9-201ENST00000306726 FLNCQ14315 2725 aa11.18□□□□□ -0.62
PTPN9-201ENST00000306726 WI2-2373I1.2A0A1W2PRP0 233 aa11.18□□□□□ -0.62
PTPN9-201ENST00000306726 ASIPP42127 132 aa11.18□□□□□ -0.62
PTPN9-201ENST00000306726 OVOL3O00110 214 aa11.18□□□□□ -0.62
PTPN9-201ENST00000306726 PRM2P04554 102 aa11.18□□□□□ -0.62
PTPN9-201ENST00000306726 PAX8Q06710 450 aa11.18□□□□□ -0.62
PTPN9-201ENST00000306726 EEF1AKMT3Q96AZ1 226 aa11.18□□□□□ -0.62
PTPN9-201ENST00000306726 PLEKHB2Q96CS7 222 aa11.18□□□□□ -0.62
PTPN9-201ENST00000306726 SPAG8Q99932 426 aaPredicted RBP11.17□□□□□ -0.62
PTPN9-201ENST00000306726 KAAG1Q9UBP8 84 aa11.17□□□□□ -0.62
PTPN9-201ENST00000306726 A0A1B0GV72 72 aa11.17□□□□□ -0.62
PTPN9-201ENST00000306726 NDUFS8O00217 210 aa11.17□□□□□ -0.62
PTPN9-201ENST00000306726 EDN2P20800 178 aa11.17□□□□□ -0.62
PTPN9-201ENST00000306726 PRR9Q5T870 116 aa11.17□□□□□ -0.62
PTPN9-201ENST00000306726 C11orf44Q8N8P7 122 aa11.17□□□□□ -0.62
PTPN9-201ENST00000306726 TNFRSF14Q92956 283 aa11.17□□□□□ -0.62
PTPN9-201ENST00000306726 TP53TG1Q9Y2A0 90 aa11.17□□□□□ -0.62
PTPN9-201ENST00000306726 CKS1BP61024 79 aa11.17□□□□□ -0.62
PTPN9-201ENST00000306726 FAM159AQ6UWV7 190 aa11.17□□□□□ -0.62
PTPN9-201ENST00000306726 BUB3O43684 328 aa11.16□□□□□ -0.62
PTPN9-201ENST00000306726 SUMO2P61956 95 aaKnown RBP11.16□□□□□ -0.62
PTPN9-201ENST00000306726 Q8N8P6 123 aa11.16□□□□□ -0.62
PTPN9-201ENST00000306726 ZNF625Q96I27 306 aaPredicted RBP11.16□□□□□ -0.62
PTPN9-201ENST00000306726 IGKV3OR2-268A0A0C4DH90 116 aa11.15□□□□□ -0.62
PTPN9-201ENST00000306726 DSCR9P59020 149 aa11.15□□□□□ -0.62
PTPN9-201ENST00000306726 PDE6HQ13956 83 aa11.15□□□□□ -0.62
PTPN9-201ENST00000306726 PSMG3-AS1Q96PY0 264 aa11.15□□□□□ -0.62
PTPN9-201ENST00000306726 CCL19Q99731 98 aa11.15□□□□□ -0.62
PTPN9-201ENST00000306726 RAB9AP51151 201 aa11.15□□□□□ -0.62
PTPN9-201ENST00000306726 HHLA3Q9XRX5 114 aa11.15□□□□□ -0.62
PTPN9-201ENST00000306726 H7C1H1 209 aa11.14□□□□□ -0.63
PTPN9-201ENST00000306726 BLCAPP62952 87 aa11.14□□□□□ -0.63
PTPN9-201ENST00000306726 C3orf56Q8N813 242 aa11.14□□□□□ -0.63
PTPN9-201ENST00000306726 INS-IGF2F8WCM5 200 aa11.14□□□□□ -0.63
PTPN9-201ENST00000306726 SPINK8P0C7L1 97 aa11.14□□□□□ -0.63
PTPN9-201ENST00000306726 SPXQ9BT56 116 aa11.14□□□□□ -0.63
PTPN9-201ENST00000306726 UTP20O75691 2785 aaKnown RBP11.14□□□□□ -0.63
PTPN9-201ENST00000306726 F8W735 103 aaPredicted RBP11.14□□□□□ -0.63
PTPN9-201ENST00000306726 PSMG4Q5JS54 123 aa11.14□□□□□ -0.63
PTPN9-201ENST00000306726 CLUHP3Q96NS8 147 aa11.14□□□□□ -0.63
PTPN9-201ENST00000306726 DUX3Q96PT4 197 aa11.14□□□□□ -0.63
PTPN9-201ENST00000306726 SMIM2Q9BVW6 85 aa11.14□□□□□ -0.63
PTPN9-201ENST00000306726 LGALS3P17931 250 aaKnown RBP11.13□□□□□ -0.63
PTPN9-201ENST00000306726 KIR2DL4Q99706 377 aa11.13□□□□□ -0.63
PTPN9-201ENST00000306726 TRAV8-2A0A0B4J237 113 aa11.13□□□□□ -0.63
PTPN9-201ENST00000306726 Q8N9W7 124 aa11.13□□□□□ -0.63
PTPN9-201ENST00000306726 H3BUX3 64 aa11.13□□□□□ -0.63
PTPN9-201ENST00000306726 UFSP1Q6NVU6 142 aa11.13□□□□□ -0.63
PTPN9-201ENST00000306726 BSNQ9UPA5 3926 aa11.13□□□□□ -0.63
PTPN9-201ENST00000306726 ZNF493Q6ZR52 646 aa11.12□□□□□ -0.63
PTPN9-201ENST00000306726 DOPEY1Q5JWR5 2465 aa11.12□□□□□ -0.63
PTPN9-201ENST00000306726 MYMXA0A1B0GTQ4 84 aa11.12□□□□□ -0.63
PTPN9-201ENST00000306726 IGLC6P0CF74 106 aa11.12□□□□□ -0.63
PTPN9-201ENST00000306726 FOXI2Q6ZQN5 318 aa11.12□□□□□ -0.63
PTPN9-201ENST00000306726 ZNF462Q96JM2 2506 aa11.12□□□□□ -0.63
PTPN9-201ENST00000306726 TRAV41A0A0B4J266 112 aa11.12□□□□□ -0.63
PTPN9-201ENST00000306726 MRPS12O15235 138 aaKnown RBP11.12□□□□□ -0.63
PTPN9-201ENST00000306726 IGHG4P01861 327 aa11.12□□□□□ -0.63
PTPN9-201ENST00000306726 LRRC75A-AS1Q8N1F1 130 aa11.12□□□□□ -0.63
PTPN9-201ENST00000306726 C20orf173Q96LM9 149 aa11.12□□□□□ -0.63
PTPN9-201ENST00000306726 A0A087WX48 190 aa11.11□□□□□ -0.63
PTPN9-201ENST00000306726 C9JAW5 83 aa11.11□□□□□ -0.63
PTPN9-201ENST00000306726 F8VRH5 84 aa11.11□□□□□ -0.63
PTPN9-201ENST00000306726 SPINK13Q1W4C9 94 aa11.11□□□□□ -0.63
PTPN9-201ENST00000306726 NRGNQ92686 78 aa11.11□□□□□ -0.63
PTPN9-201ENST00000306726 CCDC140Q96MF4 163 aa11.11□□□□□ -0.63
PTPN9-201ENST00000306726 HRNRQ86YZ3 2850 aaPredicted RBP11.11□□□□□ -0.63
PTPN9-201ENST00000306726 CEMP1Q6PRD7 247 aaPredicted RBP11.11□□□□□ -0.63
PTPN9-201ENST00000306726 RHPN1-AS1Q9BWJ2 59 aa11.11□□□□□ -0.63
PTPN9-201ENST00000306726 HERVK_113P61574 105 aa11.11□□□□□ -0.63
PTPN9-201ENST00000306726 TRBV20-1A0A075B6N2 111 aa11.1□□□□□ -0.63
PTPN9-201ENST00000306726 IGHV3-38A0A0C4DH36 116 aa11.1□□□□□ -0.63
PTPN9-201ENST00000306726 SLC50A1Q9BRV3 221 aa11.1□□□□□ -0.63
PTPN9-201ENST00000306726 IGHV3-16A0A0C4DH30 117 aa11.1□□□□□ -0.63
PTPN9-201ENST00000306726 PHLDA1Q8WV24 401 aaPredicted RBP11.1□□□□□ -0.63
PTPN9-201ENST00000306726 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
PTPN9-201ENST00000306726 Q6ZS46 218 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms