RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 PIMREGQ9BSJ6 248 aa10.9□□□□□ -0.66
SDC2-201ENST00000302190 TRAV12-2A0A075B6T6 113 aa10.9□□□□□ -0.66
SDC2-201ENST00000302190 LINC01545Q5VT33 79 aa10.9□□□□□ -0.66
SDC2-201ENST00000302190 RHPN1-AS1Q9BWJ2 59 aa10.9□□□□□ -0.66
SDC2-201ENST00000302190 A6NJY4 79 aa10.89□□□□□ -0.67
SDC2-201ENST00000302190 GNRH2O43555 120 aa10.89□□□□□ -0.67
SDC2-201ENST00000302190 MYCNOSP40205 109 aa10.89□□□□□ -0.67
SDC2-201ENST00000302190 TMEM95Q3KNT9 176 aa10.89□□□□□ -0.67
SDC2-201ENST00000302190 MINOS1Q5TGZ0 78 aa10.89□□□□□ -0.67
SDC2-201ENST00000302190 MINOS1-NBL1R4GNA1 71 aa10.89□□□□□ -0.67
SDC2-201ENST00000302190 GCN1Q92616 2671 aaKnown RBP10.89□□□□□ -0.67
SDC2-201ENST00000302190 IGKV3OR2-268A0A0C4DH90 116 aa10.88□□□□□ -0.67
SDC2-201ENST00000302190 LGALS3P17931 250 aaKnown RBP10.88□□□□□ -0.67
SDC2-201ENST00000302190 NPC2P61916 151 aa10.88□□□□□ -0.67
SDC2-201ENST00000302190 C8orf31Q8N9H6 132 aa10.88□□□□□ -0.67
SDC2-201ENST00000302190 SH2D6Q7Z4S9 175 aa10.88□□□□□ -0.67
SDC2-201ENST00000302190 IGLV2-11P01706 119 aa10.88□□□□□ -0.67
SDC2-201ENST00000302190 LGALS9BQ3B8N2 356 aa10.88□□□□□ -0.67
SDC2-201ENST00000302190 LGALS9CQ6DKI2 356 aa10.88□□□□□ -0.67
SDC2-201ENST00000302190 Q6ZQT7 251 aa10.88□□□□□ -0.67
SDC2-201ENST00000302190 INS-IGF2F8WCM5 200 aa10.87□□□□□ -0.67
SDC2-201ENST00000302190 ANXA2RQ3ZCQ2 193 aa10.87□□□□□ -0.67
SDC2-201ENST00000302190 GAGE13Q4V321 117 aa10.87□□□□□ -0.67
SDC2-201ENST00000302190 RPL39LQ96EH5 51 aaKnown RBP10.87□□□□□ -0.67
SDC2-201ENST00000302190 MOB4Q9Y3A3 225 aa10.87□□□□□ -0.67
SDC2-201ENST00000302190 H3BMG7 143 aa10.87□□□□□ -0.67
SDC2-201ENST00000302190 IGF1P05019 195 aa10.87□□□□□ -0.67
SDC2-201ENST00000302190 WFDC2Q14508 124 aa10.87□□□□□ -0.67
SDC2-201ENST00000302190 KNCNA6PVL3 124 aa10.87□□□□□ -0.67
SDC2-201ENST00000302190 NPIPB6E9PJ23 425 aa10.87□□□□□ -0.67
SDC2-201ENST00000302190 HOXB4P17483 251 aaPredicted RBP10.87□□□□□ -0.67
SDC2-201ENST00000302190 FXYD2P54710 66 aa10.87□□□□□ -0.67
SDC2-201ENST00000302190 BLCAPP62952 87 aa10.87□□□□□ -0.67
SDC2-201ENST00000302190 Q8N9W7 124 aa10.87□□□□□ -0.67
SDC2-201ENST00000302190 FAM110DQ8TAY7 271 aaPredicted RBP10.87□□□□□ -0.67
SDC2-201ENST00000302190 FBN2P35556 2912 aa10.86□□□□□ -0.67
SDC2-201ENST00000302190 SPINK8P0C7L1 97 aa10.86□□□□□ -0.67
SDC2-201ENST00000302190 OR11H6Q8NGC7 330 aa10.86□□□□□ -0.67
SDC2-201ENST00000302190 SRSF8Q9BRL6 282 aaKnown RBP10.86□□□□□ -0.67
SDC2-201ENST00000302190 BUB3O43684 328 aa10.86□□□□□ -0.67
SDC2-201ENST00000302190 UBE2E1P51965 193 aa10.86□□□□□ -0.67
SDC2-201ENST00000302190 C2orf66Q6UXQ4 117 aa10.86□□□□□ -0.67
SDC2-201ENST00000302190 C2orf91Q6ZV80 131 aa10.86□□□□□ -0.67
SDC2-201ENST00000302190 KLK9Q9UKQ9 250 aa10.86□□□□□ -0.67
SDC2-201ENST00000302190 C19orf84I3L1E1 186 aa10.85□□□□□ -0.67
SDC2-201ENST00000302190 TRBV12-3P01733 135 aa10.85□□□□□ -0.67
SDC2-201ENST00000302190 SNRPD3P62318 126 aaKnown RBP10.85□□□□□ -0.67
SDC2-201ENST00000302190 DYNLRB2Q8TF09 96 aa10.85□□□□□ -0.67
SDC2-201ENST00000302190 TRAV2A0A0B4J234 112 aa10.85□□□□□ -0.67
SDC2-201ENST00000302190 ANAPC13Q9BS18 74 aa10.85□□□□□ -0.67
SDC2-201ENST00000302190 A0A1W2PRX2 142 aa10.85□□□□□ -0.67
SDC2-201ENST00000302190 SUMO2P61956 95 aaKnown RBP10.85□□□□□ -0.67
SDC2-201ENST00000302190 TCTEX1D4Q5JR98 221 aa10.85□□□□□ -0.67
SDC2-201ENST00000302190 PGPEP1Q9NXJ5 209 aa10.85□□□□□ -0.67
SDC2-201ENST00000302190 SLC25A16P16260 332 aa10.84□□□□□ -0.67
SDC2-201ENST00000302190 ORMDL2Q53FV1 153 aa10.84□□□□□ -0.67
SDC2-201ENST00000302190 SHISA2Q6UWI4 295 aa10.84□□□□□ -0.67
SDC2-201ENST00000302190 NRGNQ92686 78 aa10.84□□□□□ -0.67
SDC2-201ENST00000302190 SPINK13Q1W4C9 94 aa10.84□□□□□ -0.67
SDC2-201ENST00000302190 DPH3P1Q9H4G8 78 aa10.84□□□□□ -0.67
SDC2-201ENST00000302190 RAI1Q7Z5J4 1906 aaPredicted RBP10.84□□□□□ -0.67
SDC2-201ENST00000302190 TRBV25-1A0A075B6N4 114 aa10.84□□□□□ -0.67
SDC2-201ENST00000302190 TRBV7-1A0A0A6YYK4 115 aa10.84□□□□□ -0.67
SDC2-201ENST00000302190 WI2-2373I1.2A0A1W2PRP0 233 aa10.84□□□□□ -0.67
SDC2-201ENST00000302190 HOXA3O43365 443 aaPredicted RBP10.84□□□□□ -0.67
SDC2-201ENST00000302190 HERV-K104P63124 156 aa10.84□□□□□ -0.67
SDC2-201ENST00000302190 PRRC2AP48634 2157 aaKnown RBP10.83□□□□□ -0.68
SDC2-201ENST00000302190 CRYGBP07316 175 aa10.83□□□□□ -0.68
SDC2-201ENST00000302190 C9orf139Q6ZV77 190 aa10.83□□□□□ -0.68
SDC2-201ENST00000302190 OOSP1A8MZH6 123 aa10.83□□□□□ -0.68
SDC2-201ENST00000302190 CRXO43186 299 aaPredicted RBP10.83□□□□□ -0.68
SDC2-201ENST00000302190 UNQ9165/PRO28630Q6UXU0 137 aa10.83□□□□□ -0.68
SDC2-201ENST00000302190 ITLN2Q8WWU7 325 aaPredicted RBP10.83□□□□□ -0.68
SDC2-201ENST00000302190 RAX2Q96IS3 184 aa10.83□□□□□ -0.68
SDC2-201ENST00000302190 SPAG8Q99932 426 aaPredicted RBP10.83□□□□□ -0.68
SDC2-201ENST00000302190 ITPR2Q14571 2701 aa10.83□□□□□ -0.68
SDC2-201ENST00000302190 ANKRD17O75179 2603 aaKnown RBP10.83□□□□□ -0.68
SDC2-201ENST00000302190 B5MCH6 92 aa10.82□□□□□ -0.68
SDC2-201ENST00000302190 SYNJ2BPP57105 145 aa10.82□□□□□ -0.68
SDC2-201ENST00000302190 Q8N8P6 123 aa10.82□□□□□ -0.68
SDC2-201ENST00000302190 KLHL30-AS1Q8NEE0 82 aa10.82□□□□□ -0.68
SDC2-201ENST00000302190 H7C1H1 209 aa10.82□□□□□ -0.68
SDC2-201ENST00000302190 SYT8Q8NBV8 401 aa10.82□□□□□ -0.68
SDC2-201ENST00000302190 TP53TG1Q9Y2A0 90 aa10.82□□□□□ -0.68
SDC2-201ENST00000302190 IGKV2D-26A0A0A0MRZ7 120 aa10.82□□□□□ -0.68
SDC2-201ENST00000302190 FLNBO75369 2602 aaKnown RBP10.82□□□□□ -0.68
SDC2-201ENST00000302190 ZNF876PQ49A33 203 aa10.81□□□□□ -0.68
SDC2-201ENST00000302190 RNASE13Q5GAN3 156 aaKnown RBP10.81□□□□□ -0.68
SDC2-201ENST00000302190 RNF183Q96D59 192 aa10.81□□□□□ -0.68
SDC2-201ENST00000302190 CUBNO60494 3623 aa10.81□□□□□ -0.68
SDC2-201ENST00000302190 AGRNO00468 2067 aa10.81□□□□□ -0.68
SDC2-201ENST00000302190 F8W1H4 67 aa10.81□□□□□ -0.68
SDC2-201ENST00000302190 IGHV4-38-2P0DP08 117 aa10.81□□□□□ -0.68
SDC2-201ENST00000302190 NPBQ8NG41 125 aa10.81□□□□□ -0.68
SDC2-201ENST00000302190 PRADC1Q9BSG0 188 aa10.81□□□□□ -0.68
SDC2-201ENST00000302190 JPT2Q9H910 190 aa10.81□□□□□ -0.68
SDC2-201ENST00000302190 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
SDC2-201ENST00000302190 DUX3Q96PT4 197 aa10.8□□□□□ -0.68
SDC2-201ENST00000302190 SMIM2Q9BVW6 85 aa10.8□□□□□ -0.68
SDC2-201ENST00000302190 OVOL1O14753 267 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms