RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TDRG1Q3Y452 100 aa16.47■□□□□ 0.23
SMAD1-201ENST00000302085 NDUFA11Q86Y39 141 aa16.47■□□□□ 0.23
SMAD1-201ENST00000302085 GAS8-AS1O95177 125 aa16.46■□□□□ 0.23
SMAD1-201ENST00000302085 NCR2O95944 276 aa16.46■□□□□ 0.23
SMAD1-201ENST00000302085 PHLDA3Q9Y5J5 127 aa16.46■□□□□ 0.22
SMAD1-201ENST00000302085 M0R381 172 aa16.45■□□□□ 0.22
SMAD1-201ENST00000302085 NPYP01303 97 aa16.45■□□□□ 0.22
SMAD1-201ENST00000302085 PMCHL1Q16048 86 aa16.45■□□□□ 0.22
SMAD1-201ENST00000302085 SAP30O75446 220 aa16.44■□□□□ 0.22
SMAD1-201ENST00000302085 SCGB1D1O95968 90 aa16.44■□□□□ 0.22
SMAD1-201ENST00000302085 CD7P09564 240 aa16.44■□□□□ 0.22
SMAD1-201ENST00000302085 ODF3L2Q3SX64 289 aa16.44■□□□□ 0.22
SMAD1-201ENST00000302085 SMIM15Q7Z3B0 74 aa16.44■□□□□ 0.22
SMAD1-201ENST00000302085 CRXO43186 299 aaPredicted RBP16.44■□□□□ 0.22
SMAD1-201ENST00000302085 GSN-AS1Q9NRJ2 163 aa16.44■□□□□ 0.22
SMAD1-201ENST00000302085 LOC389332A0A1B0GUA5 103 aa16.43■□□□□ 0.22
SMAD1-201ENST00000302085 PPBPP02775 128 aa16.43■□□□□ 0.22
SMAD1-201ENST00000302085 PRSS3P2Q8NHM4 247 aa16.43■□□□□ 0.22
SMAD1-201ENST00000302085 C2CD3Q4AC94 2353 aa16.43■□□□□ 0.22
SMAD1-201ENST00000302085 IGHV1OR15-1A0A075B7D0 117 aa16.42■□□□□ 0.22
SMAD1-201ENST00000302085 RBMY1A1P0DJD3 496 aaKnown RBP16.42■□□□□ 0.22
SMAD1-201ENST00000302085 RBMY1CP0DJD4 496 aa16.42■□□□□ 0.22
SMAD1-201ENST00000302085 IFI27P40305 119 aaPredicted RBP16.42■□□□□ 0.22
SMAD1-201ENST00000302085 RBMY1FQ15415 496 aaKnown RBP16.42■□□□□ 0.22
SMAD1-201ENST00000302085 IGHV3-16A0A0C4DH30 117 aa16.42■□□□□ 0.22
SMAD1-201ENST00000302085 IGHV1-24A0A0C4DH33 117 aa16.42■□□□□ 0.22
SMAD1-201ENST00000302085 GATA1P15976 413 aaPredicted RBP16.42■□□□□ 0.22
SMAD1-201ENST00000302085 KRTDAPP60985 99 aa16.42■□□□□ 0.22
SMAD1-201ENST00000302085 NXPH4O95158 308 aa16.41■□□□□ 0.22
SMAD1-201ENST00000302085 FLNBO75369 2602 aaKnown RBP16.41■□□□□ 0.22
SMAD1-201ENST00000302085 MUC4Q99102 2169 aa16.41■□□□□ 0.22
SMAD1-201ENST00000302085 IGLV1-51P01701 117 aa16.4■□□□□ 0.22
SMAD1-201ENST00000302085 Q8N1Y9 231 aa16.4■□□□□ 0.22
SMAD1-201ENST00000302085 MDFICQ9P1T7 246 aa16.4■□□□□ 0.22
SMAD1-201ENST00000302085 FA2HQ7L5A8 372 aa16.4■□□□□ 0.22
SMAD1-201ENST00000302085 C3orf79P0CE67 100 aa16.39■□□□□ 0.21
SMAD1-201ENST00000302085 Q8N976 141 aa16.39■□□□□ 0.21
SMAD1-201ENST00000302085 C9orf85Q96MD7 179 aa16.39■□□□□ 0.21
SMAD1-201ENST00000302085 TNFRSF6BO95407 300 aa16.38■□□□□ 0.21
SMAD1-201ENST00000302085 C14orf178Q8N769 122 aaPredicted RBP16.38■□□□□ 0.21
SMAD1-201ENST00000302085 AP5S1Q9NUS5 200 aa16.38■□□□□ 0.21
SMAD1-201ENST00000302085 LAMTOR2Q9Y2Q5 125 aa16.38■□□□□ 0.21
SMAD1-201ENST00000302085 TRAV26-2A0A0B4J265 109 aa16.38■□□□□ 0.21
SMAD1-201ENST00000302085 CLUHP3Q96NS8 147 aa16.38■□□□□ 0.21
SMAD1-201ENST00000302085 OR11H12B2RN74 326 aa16.37■□□□□ 0.21
SMAD1-201ENST00000302085 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.37■□□□□ 0.21
SMAD1-201ENST00000302085 DPH3P1Q9H4G8 78 aa16.37■□□□□ 0.21
SMAD1-201ENST00000302085 LINC00482Q8N8I6 264 aa16.36■□□□□ 0.21
SMAD1-201ENST00000302085 NRACQ8N912 160 aa16.36■□□□□ 0.21
SMAD1-201ENST00000302085 OR2K2Q8NGT1 345 aa16.36■□□□□ 0.21
SMAD1-201ENST00000302085 S100A12P80511 92 aa16.35■□□□□ 0.21
SMAD1-201ENST00000302085 LINC00173Q6ZV60 143 aa16.35■□□□□ 0.21
SMAD1-201ENST00000302085 MAP1LC3AQ9H492 121 aa16.35■□□□□ 0.21
SMAD1-201ENST00000302085 PF4P02776 101 aa16.35■□□□□ 0.21
SMAD1-201ENST00000302085 MRAP2Q96G30 205 aa16.35■□□□□ 0.21
SMAD1-201ENST00000302085 KIF25-AS1Q9Y6Z4 181 aa16.35■□□□□ 0.21
SMAD1-201ENST00000302085 AP1S3Q96PC3 154 aa16.34■□□□□ 0.21
SMAD1-201ENST00000302085 JPT2Q9H910 190 aa16.34■□□□□ 0.21
SMAD1-201ENST00000302085 CBY3A6NI87 242 aa16.33■□□□□ 0.21
SMAD1-201ENST00000302085 LEPROTL1O95214 131 aa16.33■□□□□ 0.21
SMAD1-201ENST00000302085 CMC4P56277 68 aaPredicted RBP16.33■□□□□ 0.21
SMAD1-201ENST00000302085 BEAN1Q3B7T3 259 aa16.33■□□□□ 0.21
SMAD1-201ENST00000302085 F8P00451 2351 aa16.33■□□□□ 0.2
SMAD1-201ENST00000302085 TRGV11A0A075B6L2 103 aa16.33■□□□□ 0.2
SMAD1-201ENST00000302085 LINC00315P59091 139 aa16.33■□□□□ 0.2
SMAD1-201ENST00000302085 TRPT1Q86TN4 253 aaKnown RBP16.33■□□□□ 0.2
SMAD1-201ENST00000302085 STHQ8IWL8 128 aa16.33■□□□□ 0.2
SMAD1-201ENST00000302085 ZNF664Q8N3J9 261 aa16.33■□□□□ 0.2
SMAD1-201ENST00000302085 A0A096LNJ9 63 aa16.32■□□□□ 0.2
SMAD1-201ENST00000302085 POM121L12Q8N7R1 296 aa16.32■□□□□ 0.2
SMAD1-201ENST00000302085 LINC01546A6NGU7 62 aa16.31■□□□□ 0.2
SMAD1-201ENST00000302085 PRSS47A8MTI9 375 aa16.31■□□□□ 0.2
SMAD1-201ENST00000302085 PRM2P04554 102 aa16.31■□□□□ 0.2
SMAD1-201ENST00000302085 BTF3P20290 206 aaKnown RBP16.31■□□□□ 0.2
SMAD1-201ENST00000302085 C19orf73Q9NVV2 129 aa16.31■□□□□ 0.2
SMAD1-201ENST00000302085 MGPP08493 103 aa16.31■□□□□ 0.2
SMAD1-201ENST00000302085 HTN1P15515 57 aa16.31■□□□□ 0.2
SMAD1-201ENST00000302085 TEX43Q6ZNM6 134 aa16.31■□□□□ 0.2
SMAD1-201ENST00000302085 PRO1933Q9H354 126 aa16.31■□□□□ 0.2
SMAD1-201ENST00000302085 DEFB125Q8N687 156 aa16.3■□□□□ 0.2
SMAD1-201ENST00000302085 IGLV2-18A0A075B6J9 118 aa16.29■□□□□ 0.2
SMAD1-201ENST00000302085 SPATA12Q7Z6I5 190 aa16.29■□□□□ 0.2
SMAD1-201ENST00000302085 RASL10AQ92737 203 aa16.29■□□□□ 0.2
SMAD1-201ENST00000302085 NXT2Q9NPJ8 142 aaKnown RBP16.29■□□□□ 0.2
SMAD1-201ENST00000302085 XCL2Q9UBD3 114 aa16.29■□□□□ 0.2
SMAD1-201ENST00000302085 INSP01308 110 aa16.29■□□□□ 0.2
SMAD1-201ENST00000302085 PKIAP61925 76 aa16.29■□□□□ 0.2
SMAD1-201ENST00000302085 Q8N8P6 123 aa16.29■□□□□ 0.2
SMAD1-201ENST00000302085 FAM110AQ9BQ89 295 aa16.29■□□□□ 0.2
SMAD1-201ENST00000302085 SYT8Q8NBV8 401 aa16.28■□□□□ 0.2
SMAD1-201ENST00000302085 LINC01587Q99440 93 aa16.28■□□□□ 0.2
SMAD1-201ENST00000302085 CITED1Q99966 193 aa16.28■□□□□ 0.2
SMAD1-201ENST00000302085 C20orf144Q9BQM9 153 aa16.28■□□□□ 0.2
SMAD1-201ENST00000302085 LINC00467Q9BRT7 94 aa16.28■□□□□ 0.2
SMAD1-201ENST00000302085 TMEM70Q9BUB7 260 aa16.28■□□□□ 0.2
SMAD1-201ENST00000302085 A0A087WWL8 130 aa16.27■□□□□ 0.2
SMAD1-201ENST00000302085 SPATA3Q8NHX4 192 aa16.27■□□□□ 0.2
SMAD1-201ENST00000302085 WFDC10AQ9H1F0 79 aa16.27■□□□□ 0.2
SMAD1-201ENST00000302085 HSPB8Q9UJY1 196 aa16.27■□□□□ 0.2
SMAD1-201ENST00000302085 SMIM17P0DL12 118 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms