RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 DPF1Q92782 380 aa10.93□□□□□ -0.66
SMG8-201ENST00000300917 TCF21O43680 179 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 ELANEP08246 267 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 KLHL30-AS1Q8NEE0 82 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 SMR3AQ99954 134 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 JPT2Q9H910 190 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 K7EMT4 169 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 IGLC3P0DOY3 106 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 TMEM208Q9BTX3 173 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 ZNF747Q9BV97 191 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 MAP1LC3AQ9H492 121 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 HSPB8Q9UJY1 196 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 TRAV9-2A0A087WT02 112 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 ASIPP42127 132 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 U3KQK5 164 aa10.92□□□□□ -0.66
SMG8-201ENST00000300917 KNCNA6PVL3 124 aa10.91□□□□□ -0.66
SMG8-201ENST00000300917 PRM2P04554 102 aa10.91□□□□□ -0.66
SMG8-201ENST00000300917 UBE2E2Q96LR5 201 aa10.91□□□□□ -0.66
SMG8-201ENST00000300917 DNAJC9-AS1A6NH13 148 aa10.91□□□□□ -0.66
SMG8-201ENST00000300917 CD7P09564 240 aa10.91□□□□□ -0.66
SMG8-201ENST00000300917 HNRNPA3P51991 378 aaKnown RBP10.91□□□□□ -0.66
SMG8-201ENST00000300917 ESM1Q9NQ30 184 aa10.91□□□□□ -0.66
SMG8-201ENST00000300917 FN1P02751 2386 aaKnown RBP10.91□□□□□ -0.66
SMG8-201ENST00000300917 C20orf202A1L168 122 aa10.9□□□□□ -0.66
SMG8-201ENST00000300917 LEPP41159 167 aa10.9□□□□□ -0.66
SMG8-201ENST00000300917 SNRPD3P62318 126 aaKnown RBP10.9□□□□□ -0.66
SMG8-201ENST00000300917 ADAMTSL5Q6ZMM2 481 aa10.9□□□□□ -0.66
SMG8-201ENST00000300917 CNFNQ9BYD5 112 aa10.9□□□□□ -0.66
SMG8-201ENST00000300917 CACNG7P62955 275 aa10.9□□□□□ -0.66
SMG8-201ENST00000300917 SRSF2Q01130 221 aaKnown RBP10.9□□□□□ -0.67
SMG8-201ENST00000300917 FAM159AQ6UWV7 190 aa10.9□□□□□ -0.67
SMG8-201ENST00000300917 Q6ZSV7 163 aa10.9□□□□□ -0.67
SMG8-201ENST00000300917 DLEU1O43261 78 aa10.89□□□□□ -0.67
SMG8-201ENST00000300917 SETXQ7Z333 2677 aaKnown RBP10.89□□□□□ -0.67
SMG8-201ENST00000300917 A0A087WWL8 130 aa10.89□□□□□ -0.67
SMG8-201ENST00000300917 NEGR1Q7Z3B1 354 aa10.89□□□□□ -0.67
SMG8-201ENST00000300917 OR2K2Q8NGT1 345 aa10.89□□□□□ -0.67
SMG8-201ENST00000300917 DLX4Q92988 240 aaPredicted RBP10.89□□□□□ -0.67
SMG8-201ENST00000300917 RPL39LQ96EH5 51 aaKnown RBP10.89□□□□□ -0.67
SMG8-201ENST00000300917 UQCR10Q9UDW1 63 aa10.89□□□□□ -0.67
SMG8-201ENST00000300917 ZNF580Q9UK33 172 aa10.89□□□□□ -0.67
SMG8-201ENST00000300917 HBDP02042 147 aa10.89□□□□□ -0.67
SMG8-201ENST00000300917 HINT1P49773 126 aaPredicted RBP10.89□□□□□ -0.67
SMG8-201ENST00000300917 DEFB131AP59861 70 aa10.88□□□□□ -0.67
SMG8-201ENST00000300917 FAM74A4Q5TZK3 123 aa10.88□□□□□ -0.67
SMG8-201ENST00000300917 RNASE3P12724 160 aaKnown RBP10.88□□□□□ -0.67
SMG8-201ENST00000300917 LENEPQ9Y5L5 61 aa10.88□□□□□ -0.67
SMG8-201ENST00000300917 AKAP9Q99996 3911 aa10.88□□□□□ -0.67
SMG8-201ENST00000300917 MUC4Q99102 2169 aa10.87□□□□□ -0.67
SMG8-201ENST00000300917 K7EQG2 157 aa10.87□□□□□ -0.67
SMG8-201ENST00000300917 STPG4Q8N801 248 aa10.87□□□□□ -0.67
SMG8-201ENST00000300917 TMEM158Q8WZ71 300 aa10.87□□□□□ -0.67
SMG8-201ENST00000300917 OR1N2Q8NGR9 330 aa10.87□□□□□ -0.67
SMG8-201ENST00000300917 TMEM61Q8N0U2 210 aa10.87□□□□□ -0.67
SMG8-201ENST00000300917 MDFICQ9P1T7 246 aa10.87□□□□□ -0.67
SMG8-201ENST00000300917 A0A0J9YX75 114 aa10.86□□□□□ -0.67
SMG8-201ENST00000300917 F5H697 171 aa10.86□□□□□ -0.67
SMG8-201ENST00000300917 LINC01619G3V211 115 aa10.86□□□□□ -0.67
SMG8-201ENST00000300917 PET117Q6UWS5 81 aa10.86□□□□□ -0.67
SMG8-201ENST00000300917 APRG1Q8IVJ8 170 aa10.86□□□□□ -0.67
SMG8-201ENST00000300917 IFI27L1Q96BM0 104 aa10.86□□□□□ -0.67
SMG8-201ENST00000300917 FAM19A4Q96LR4 140 aa10.86□□□□□ -0.67
SMG8-201ENST00000300917 TMEM89A2RUT3 159 aa10.85□□□□□ -0.67
SMG8-201ENST00000300917 PPBPP02775 128 aa10.85□□□□□ -0.67
SMG8-201ENST00000300917 MYOZ3Q8TDC0 251 aa10.85□□□□□ -0.67
SMG8-201ENST00000300917 DKK2Q9UBU2 259 aa10.85□□□□□ -0.67
SMG8-201ENST00000300917 CRXO43186 299 aaPredicted RBP10.85□□□□□ -0.67
SMG8-201ENST00000300917 PRSS1P07477 247 aa10.85□□□□□ -0.67
SMG8-201ENST00000300917 RNASE8Q8TDE3 154 aaKnown RBP10.85□□□□□ -0.67
SMG8-201ENST00000300917 DYNLRB2Q8TF09 96 aa10.85□□□□□ -0.67
SMG8-201ENST00000300917 C2CD3Q4AC94 2353 aa10.85□□□□□ -0.67
SMG8-201ENST00000300917 TSPOP30536 169 aa10.85□□□□□ -0.67
SMG8-201ENST00000300917 Q6ZVH6 145 aa10.85□□□□□ -0.67
SMG8-201ENST00000300917 C7orf71A4D174 169 aa10.84□□□□□ -0.67
SMG8-201ENST00000300917 KLLNB2CW77 178 aa10.84□□□□□ -0.67
SMG8-201ENST00000300917 TMEM238C9JI98 176 aa10.84□□□□□ -0.67
SMG8-201ENST00000300917 CD28P10747 220 aa10.84□□□□□ -0.67
SMG8-201ENST00000300917 NRACQ8N912 160 aa10.84□□□□□ -0.67
SMG8-201ENST00000300917 LINC01545Q5VT33 79 aa10.83□□□□□ -0.67
SMG8-201ENST00000300917 OR9G4Q8NGQ1 327 aa10.83□□□□□ -0.67
SMG8-201ENST00000300917 Q8N1Y9 231 aa10.83□□□□□ -0.68
SMG8-201ENST00000300917 OTOGQ6ZRI0 2925 aa10.83□□□□□ -0.68
SMG8-201ENST00000300917 FLNBO75369 2602 aaKnown RBP10.83□□□□□ -0.68
SMG8-201ENST00000300917 LAMTOR2Q9Y2Q5 125 aa10.83□□□□□ -0.68
SMG8-201ENST00000300917 KRTAP1-1Q07627 177 aa10.82□□□□□ -0.68
SMG8-201ENST00000300917 NXT2Q9NPJ8 142 aaKnown RBP10.82□□□□□ -0.68
SMG8-201ENST00000300917 LGALS9O00182 355 aa10.82□□□□□ -0.68
SMG8-201ENST00000300917 CD5LO43866 347 aa10.82□□□□□ -0.68
SMG8-201ENST00000300917 CDKN1BP46527 198 aa10.82□□□□□ -0.68
SMG8-201ENST00000300917 DPH3P1Q9H4G8 78 aa10.82□□□□□ -0.68
SMG8-201ENST00000300917 NUDT3O95989 172 aa10.82□□□□□ -0.68
SMG8-201ENST00000300917 SMIM17P0DL12 118 aa10.82□□□□□ -0.68
SMG8-201ENST00000300917 ERASQ7Z444 233 aa10.82□□□□□ -0.68
SMG8-201ENST00000300917 RASL10AQ92737 203 aa10.82□□□□□ -0.68
SMG8-201ENST00000300917 FOXC2Q99958 501 aa10.82□□□□□ -0.68
SMG8-201ENST00000300917 CITED2Q99967 270 aaPredicted RBP10.82□□□□□ -0.68
SMG8-201ENST00000300917 IGHV3-73A0A0B4J1V6 119 aa10.81□□□□□ -0.68
SMG8-201ENST00000300917 CD300EQ496F6 205 aaPredicted RBP10.81□□□□□ -0.68
SMG8-201ENST00000300917 NACAE9PAV3 2078 aa10.81□□□□□ -0.68
SMG8-201ENST00000300917 Q8N8P6 123 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms