RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 NHLRC4P0CG21 123 aaPredicted RBP8.41□□□□□ -1.06
SNX20-201ENST00000300590 UBE2D3P61077 147 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 UBE2D2P62837 147 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 NTN5Q8WTR8 489 aaPredicted RBP8.41□□□□□ -1.06
SNX20-201ENST00000300590 IGKV3-7A0A075B6H7 116 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 TNFRSF13BO14836 293 aaPredicted RBP8.41□□□□□ -1.06
SNX20-201ENST00000300590 ECSCRQ19T08 205 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 ORMDL2Q53FV1 153 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 TNFRSF18Q9Y5U5 241 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 PTPRZ1P23471 2315 aaPredicted RBP8.4□□□□□ -1.06
SNX20-201ENST00000300590 COX8CQ7Z4L0 72 aa8.4□□□□□ -1.06
SNX20-201ENST00000300590 NUP37Q8NFH4 326 aa8.4□□□□□ -1.06
SNX20-201ENST00000300590 COL6A6A6NMZ7 2263 aa8.4□□□□□ -1.06
SNX20-201ENST00000300590 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.07
SNX20-201ENST00000300590 A0A0J9YY99 117 aa8.39□□□□□ -1.07
SNX20-201ENST00000300590 TOMM6Q96B49 74 aa8.39□□□□□ -1.07
SNX20-201ENST00000300590 COL27A1Q8IZC6 1860 aaPredicted RBP8.39□□□□□ -1.07
SNX20-201ENST00000300590 RPL39P62891 51 aaKnown RBP8.39□□□□□ -1.07
SNX20-201ENST00000300590 DPM3Q9P2X0 92 aa8.39□□□□□ -1.07
SNX20-201ENST00000300590 PHLDA3Q9Y5J5 127 aa8.39□□□□□ -1.07
SNX20-201ENST00000300590 TRAV2A0A0B4J234 112 aa8.39□□□□□ -1.07
SNX20-201ENST00000300590 RHODO00212 210 aa8.39□□□□□ -1.07
SNX20-201ENST00000300590 CLEC19AQ6UXS0 136 aa8.39□□□□□ -1.07
SNX20-201ENST00000300590 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.39□□□□□ -1.07
SNX20-201ENST00000300590 C10orf126Q8N4M7 172 aa8.39□□□□□ -1.07
SNX20-201ENST00000300590 PRO1854Q9UHT4 67 aa8.39□□□□□ -1.07
SNX20-201ENST00000300590 MSRB2Q9Y3D2 182 aa8.39□□□□□ -1.07
SNX20-201ENST00000300590 MRPL23Q16540 153 aaKnown RBP8.38□□□□□ -1.07
SNX20-201ENST00000300590 C15orf32Q32M92 178 aa8.38□□□□□ -1.07
SNX20-201ENST00000300590 PRR9Q5T870 116 aa8.38□□□□□ -1.07
SNX20-201ENST00000300590 ANKRD11Q6UB99 2663 aaPredicted RBP8.38□□□□□ -1.07
SNX20-201ENST00000300590 TSPEAR-AS2P59090 65 aa8.38□□□□□ -1.07
SNX20-201ENST00000300590 C15orf53Q8NAA6 179 aa8.38□□□□□ -1.07
SNX20-201ENST00000300590 UBTD1Q9HAC8 227 aa8.38□□□□□ -1.07
SNX20-201ENST00000300590 KAAG1Q9UBP8 84 aa8.38□□□□□ -1.07
SNX20-201ENST00000300590 TEX49A0A1B0GTD5 131 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 A4D1N5 150 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 TP53TG1Q9Y2A0 90 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 E7EQL1 145 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 BUB3O43684 328 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 HERVK_113P61574 105 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 F5H697 171 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 ZNF883P0CG24 379 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 COX6B1P14854 86 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 TCF15Q12870 199 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 Q6ZS92 163 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 C16orf92Q96LL3 132 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 PSMG3-AS1Q96PY0 264 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 SLC50A1Q9BRV3 221 aa8.37□□□□□ -1.07
SNX20-201ENST00000300590 CUL9Q8IWT3 2517 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 A0A0G2JNJ9 132 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 Q9UFV3 132 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 VPREB3Q9UKI3 123 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 BDP1A6H8Y1 2624 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 TRAV8-4A0A0B4J246 113 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 LINC01619G3V211 115 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 GNRH2O43555 120 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 ELANEP08246 267 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 RPL11P62913 178 aaKnown RBP8.36□□□□□ -1.07
SNX20-201ENST00000300590 Q8N1Y9 231 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 ANKHD1Q8IWZ3 2542 aaKnown RBP8.36□□□□□ -1.07
SNX20-201ENST00000300590 SORL1Q92673 2214 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 IGHV3-30P01768 117 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 CRYGDP07320 174 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 IGHV3-30-5P0DP03 117 aa8.36□□□□□ -1.07
SNX20-201ENST00000300590 SRSF2Q01130 221 aaKnown RBP8.36□□□□□ -1.07
SNX20-201ENST00000300590 ZNF672Q499Z4 452 aaPredicted RBP8.36□□□□□ -1.07
SNX20-201ENST00000300590 OPRPNQ99935 248 aaPredicted RBP8.36□□□□□ -1.07
SNX20-201ENST00000300590 ADARB2-AS1A8MUL3 147 aa8.35□□□□□ -1.07
SNX20-201ENST00000300590 IGFL2Q6UWQ7 119 aa8.35□□□□□ -1.07
SNX20-201ENST00000300590 TMEM190Q8WZ59 177 aa8.35□□□□□ -1.07
SNX20-201ENST00000300590 JPT2Q9H910 190 aa8.35□□□□□ -1.07
SNX20-201ENST00000300590 LY6LH3BQJ8 138 aa8.35□□□□□ -1.07
SNX20-201ENST00000300590 PRSS2P07478 247 aa8.35□□□□□ -1.07
SNX20-201ENST00000300590 LGALS3P17931 250 aaKnown RBP8.35□□□□□ -1.07
SNX20-201ENST00000300590 TIMD4Q96H15 378 aa8.35□□□□□ -1.07
SNX20-201ENST00000300590 RNF5Q99942 180 aa8.35□□□□□ -1.07
SNX20-201ENST00000300590 CHCHD5Q9BSY4 110 aa8.35□□□□□ -1.07
SNX20-201ENST00000300590 CREBBPQ92793 2442 aa8.34□□□□□ -1.07
SNX20-201ENST00000300590 DPH3P1Q9H4G8 78 aa8.34□□□□□ -1.07
SNX20-201ENST00000300590 A0A087WWL8 130 aa8.34□□□□□ -1.07
SNX20-201ENST00000300590 G3V318 75 aa8.34□□□□□ -1.07
SNX20-201ENST00000300590 SRD5A1P18405 259 aa8.34□□□□□ -1.07
SNX20-201ENST00000300590 RNASE4P34096 147 aaKnown RBP8.34□□□□□ -1.07
SNX20-201ENST00000300590 LINC00527Q9UJ94 153 aa8.34□□□□□ -1.07
SNX20-201ENST00000300590 ZNF256Q9Y2P7 627 aaPredicted RBP8.34□□□□□ -1.07
SNX20-201ENST00000300590 SPTAN1Q13813 2472 aaKnown RBP8.34□□□□□ -1.07
SNX20-201ENST00000300590 TTC28Q96AY4 2481 aa8.34□□□□□ -1.07
SNX20-201ENST00000300590 F6UB75 175 aa8.34□□□□□ -1.07
SNX20-201ENST00000300590 NPC2P61916 151 aa8.34□□□□□ -1.07
SNX20-201ENST00000300590 J3QQQ9 107 aa8.33□□□□□ -1.08
SNX20-201ENST00000300590 TSHBP01222 138 aa8.33□□□□□ -1.08
SNX20-201ENST00000300590 ZNF56Q15929 161 aa8.33□□□□□ -1.08
SNX20-201ENST00000300590 FAM74A4Q5TZK3 123 aa8.33□□□□□ -1.08
SNX20-201ENST00000300590 IGLV4-69A0A075B6H9 119 aa8.33□□□□□ -1.08
SNX20-201ENST00000300590 MUSTN1Q8IVN3 82 aa8.33□□□□□ -1.08
SNX20-201ENST00000300590 SLC25A29Q8N8R3 303 aa8.33□□□□□ -1.08
SNX20-201ENST00000300590 DEFB124Q8NES8 71 aa8.33□□□□□ -1.08
SNX20-201ENST00000300590 OR10J6PQ8NGY7 276 aa8.33□□□□□ -1.08
SNX20-201ENST00000300590 PF4V1P10720 104 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms