RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 IGKV3-20P01619 116 aa18.39■□□□□ 0.53
SPTSSA-201ENST00000298130 RNASE3P12724 160 aaKnown RBP18.39■□□□□ 0.53
SPTSSA-201ENST00000298130 MRAP2Q96G30 205 aa18.39■□□□□ 0.53
SPTSSA-201ENST00000298130 DPH3P1Q9H4G8 78 aa18.39■□□□□ 0.53
SPTSSA-201ENST00000298130 POLQO75417 2590 aa18.38■□□□□ 0.53
SPTSSA-201ENST00000298130 PKD1L2Q7Z442 2459 aa18.38■□□□□ 0.53
SPTSSA-201ENST00000298130 NDUFA4O00483 81 aa18.38■□□□□ 0.53
SPTSSA-201ENST00000298130 RNF223E7ERA6 249 aa18.38■□□□□ 0.53
SPTSSA-201ENST00000298130 COTL1Q14019 142 aa18.38■□□□□ 0.53
SPTSSA-201ENST00000298130 AMTNQ6UX39 209 aa18.38■□□□□ 0.53
SPTSSA-201ENST00000298130 C2orf66Q6UXQ4 117 aa18.38■□□□□ 0.53
SPTSSA-201ENST00000298130 PRSS47A8MTI9 375 aa18.37■□□□□ 0.53
SPTSSA-201ENST00000298130 F8VRH5 84 aa18.37■□□□□ 0.53
SPTSSA-201ENST00000298130 A0A087WWL8 130 aa18.37■□□□□ 0.53
SPTSSA-201ENST00000298130 H7C1H1 209 aa18.37■□□□□ 0.53
SPTSSA-201ENST00000298130 C10orf99Q6UWK7 81 aa18.37■□□□□ 0.53
SPTSSA-201ENST00000298130 ZANQ9Y493 2812 aa18.37■□□□□ 0.53
SPTSSA-201ENST00000298130 CSTL1Q9H114 145 aa18.36■□□□□ 0.53
SPTSSA-201ENST00000298130 CYSLTR1Q9Y271 337 aa18.36■□□□□ 0.53
SPTSSA-201ENST00000298130 CENPEQ02224 2701 aa18.36■□□□□ 0.53
SPTSSA-201ENST00000298130 OVOL1O14753 267 aa18.36■□□□□ 0.53
SPTSSA-201ENST00000298130 TM2D2Q9BX73 214 aa18.35■□□□□ 0.53
SPTSSA-201ENST00000298130 IGHV4-30-2A0A087WSY4 118 aa18.35■□□□□ 0.53
SPTSSA-201ENST00000298130 PLNP26678 52 aa18.35■□□□□ 0.53
SPTSSA-201ENST00000298130 BAALCQ8WXS3 180 aa18.35■□□□□ 0.53
SPTSSA-201ENST00000298130 DUSP14O95147 198 aaKnown RBP18.34■□□□□ 0.53
SPTSSA-201ENST00000298130 TOMM6Q96B49 74 aa18.34■□□□□ 0.53
SPTSSA-201ENST00000298130 AVPP01185 164 aa18.34■□□□□ 0.53
SPTSSA-201ENST00000298130 NEXN-AS1Q8NBZ9 246 aa18.34■□□□□ 0.53
SPTSSA-201ENST00000298130 USP9XQ93008 2570 aaPredicted RBP18.34■□□□□ 0.53
SPTSSA-201ENST00000298130 PRSS29PA6NIE9 313 aa18.33■□□□□ 0.53
SPTSSA-201ENST00000298130 OR11H12B2RN74 326 aa18.33■□□□□ 0.53
SPTSSA-201ENST00000298130 G3V4G9 280 aa18.33■□□□□ 0.53
SPTSSA-201ENST00000298130 ORMDL2Q53FV1 153 aa18.33■□□□□ 0.53
SPTSSA-201ENST00000298130 SFTA2Q6UW10 78 aa18.33■□□□□ 0.53
SPTSSA-201ENST00000298130 OR11H1Q8NG94 326 aa18.33■□□□□ 0.53
SPTSSA-201ENST00000298130 OR11H2Q8NH07 326 aa18.33■□□□□ 0.53
SPTSSA-201ENST00000298130 NRGNQ92686 78 aa18.33■□□□□ 0.53
SPTSSA-201ENST00000298130 TRAV12-3A0A0B4J271 114 aa18.33■□□□□ 0.52
SPTSSA-201ENST00000298130 C12orf74Q32Q52 190 aa18.33■□□□□ 0.52
SPTSSA-201ENST00000298130 OR5A1Q8NGJ0 315 aa18.33■□□□□ 0.52
SPTSSA-201ENST00000298130 LENEPQ9Y5L5 61 aa18.33■□□□□ 0.52
SPTSSA-201ENST00000298130 TEX48A0A1B0GUV7 120 aa18.32■□□□□ 0.52
SPTSSA-201ENST00000298130 IGLL5B9A064 214 aa18.32■□□□□ 0.52
SPTSSA-201ENST00000298130 IGHG2P01859 326 aa18.32■□□□□ 0.52
SPTSSA-201ENST00000298130 HLA-DRB4P13762 266 aa18.32■□□□□ 0.52
SPTSSA-201ENST00000298130 KLHL30-AS1Q8NEE0 82 aa18.32■□□□□ 0.52
SPTSSA-201ENST00000298130 HLA-DRB4X5D2U9 266 aa18.32■□□□□ 0.52
SPTSSA-201ENST00000298130 H3BMG7 143 aa18.31■□□□□ 0.52
SPTSSA-201ENST00000298130 TRAV12-2A0A075B6T6 113 aa18.31■□□□□ 0.52
SPTSSA-201ENST00000298130 F5H697 171 aa18.31■□□□□ 0.52
SPTSSA-201ENST00000298130 RPL39P62891 51 aaKnown RBP18.31■□□□□ 0.52
SPTSSA-201ENST00000298130 CD300EQ496F6 205 aaPredicted RBP18.31■□□□□ 0.52
SPTSSA-201ENST00000298130 FAM74A4Q5TZK3 123 aa18.31■□□□□ 0.52
SPTSSA-201ENST00000298130 CCL19Q99731 98 aa18.31■□□□□ 0.52
SPTSSA-201ENST00000298130 PIMREGQ9BSJ6 248 aa18.31■□□□□ 0.52
SPTSSA-201ENST00000298130 ZNF479Q96JC4 524 aa18.3■□□□□ 0.52
SPTSSA-201ENST00000298130 WFDC2Q14508 124 aa18.3■□□□□ 0.52
SPTSSA-201ENST00000298130 ATP5J2P56134 94 aa18.3■□□□□ 0.52
SPTSSA-201ENST00000298130 PRADC1Q9BSG0 188 aa18.3■□□□□ 0.52
SPTSSA-201ENST00000298130 MYMXA0A1B0GTQ4 84 aa18.29■□□□□ 0.52
SPTSSA-201ENST00000298130 PLEKHB2Q96CS7 222 aa18.29■□□□□ 0.52
SPTSSA-201ENST00000298130 FAM19A4Q96LR4 140 aa18.29■□□□□ 0.52
SPTSSA-201ENST00000298130 A6NDX4 124 aa18.29■□□□□ 0.52
SPTSSA-201ENST00000298130 CD7P09564 240 aa18.29■□□□□ 0.52
SPTSSA-201ENST00000298130 ZNF688P0C7X2 276 aa18.29■□□□□ 0.52
SPTSSA-201ENST00000298130 C20orf78Q9BR46 151 aa18.29■□□□□ 0.52
SPTSSA-201ENST00000298130 CRIP2P52943 208 aaPredicted RBP18.28■□□□□ 0.52
SPTSSA-201ENST00000298130 SCGB2A2Q13296 93 aa18.28■□□□□ 0.52
SPTSSA-201ENST00000298130 DAZ1Q9NQZ3 744 aaKnown RBP18.28■□□□□ 0.52
SPTSSA-201ENST00000298130 TRAV12-1A0A0B4J245 112 aa18.28■□□□□ 0.52
SPTSSA-201ENST00000298130 USMG5Q96IX5 58 aa18.28■□□□□ 0.52
SPTSSA-201ENST00000298130 LGALS1P09382 135 aaKnown RBP18.27■□□□□ 0.52
SPTSSA-201ENST00000298130 SLC25A16P16260 332 aa18.27■□□□□ 0.52
SPTSSA-201ENST00000298130 PSMG4Q5JS54 123 aa18.27■□□□□ 0.52
SPTSSA-201ENST00000298130 FAM159AQ6UWV7 190 aa18.27■□□□□ 0.52
SPTSSA-201ENST00000298130 TRBV7-3A0A075B6L6 115 aa18.27■□□□□ 0.51
SPTSSA-201ENST00000298130 E9PLD3 99 aa18.27■□□□□ 0.51
SPTSSA-201ENST00000298130 C10orf105Q8TEF2 133 aa18.27■□□□□ 0.51
SPTSSA-201ENST00000298130 TP53TG1Q9Y2A0 90 aa18.27■□□□□ 0.51
SPTSSA-201ENST00000298130 LINC00315P59091 139 aa18.26■□□□□ 0.51
SPTSSA-201ENST00000298130 SH2D6Q7Z4S9 175 aa18.26■□□□□ 0.51
SPTSSA-201ENST00000298130 MYO18BQ8IUG5 2567 aa18.26■□□□□ 0.51
SPTSSA-201ENST00000298130 TSHBP01222 138 aa18.26■□□□□ 0.51
SPTSSA-201ENST00000298130 DUX5Q96PT3 197 aa18.26■□□□□ 0.51
SPTSSA-201ENST00000298130 ZNF815PA8K554 130 aa18.25■□□□□ 0.51
SPTSSA-201ENST00000298130 CRYGDP07320 174 aa18.25■□□□□ 0.51
SPTSSA-201ENST00000298130 MAPK1IP1LQ8NDC0 245 aa18.25■□□□□ 0.51
SPTSSA-201ENST00000298130 CACNA1AO00555 2505 aa18.25■□□□□ 0.51
SPTSSA-201ENST00000298130 SUMO4Q6EEV6 95 aa18.25■□□□□ 0.51
SPTSSA-201ENST00000298130 SCGB1D4Q6XE38 83 aa18.25■□□□□ 0.51
SPTSSA-201ENST00000298130 ZNF256Q9Y2P7 627 aaPredicted RBP18.24■□□□□ 0.51
SPTSSA-201ENST00000298130 KIF25-AS1Q9Y6Z4 181 aa18.24■□□□□ 0.51
SPTSSA-201ENST00000298130 CLEC2AQ6UVW9 174 aa18.24■□□□□ 0.51
SPTSSA-201ENST00000298130 MDFICQ9P1T7 246 aa18.24■□□□□ 0.51
SPTSSA-201ENST00000298130 C11orf86A6NJI1 115 aa18.23■□□□□ 0.51
SPTSSA-201ENST00000298130 FOXI2Q6ZQN5 318 aa18.23■□□□□ 0.51
SPTSSA-201ENST00000298130 ATP6V0BQ99437 205 aa18.23■□□□□ 0.51
SPTSSA-201ENST00000298130 OPRPNQ99935 248 aaPredicted RBP18.22■□□□□ 0.51
SPTSSA-201ENST00000298130 IGLV1-40P01703 118 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms