RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 PTH2Q96A98 100 aa13.11□□□□□ -0.31
CXCL3-201ENST00000296026 GTSF1LQ9H1H1 148 aa13.11□□□□□ -0.31
CXCL3-201ENST00000296026 ALG5Q9Y673 324 aa13.11□□□□□ -0.31
CXCL3-201ENST00000296026 GGTLC3B5MD39 225 aa13.1□□□□□ -0.31
CXCL3-201ENST00000296026 MBP02144 154 aa13.1□□□□□ -0.31
CXCL3-201ENST00000296026 MGST1P10620 155 aaKnown RBP13.1□□□□□ -0.31
CXCL3-201ENST00000296026 SERF2P84101 59 aa13.1□□□□□ -0.31
CXCL3-201ENST00000296026 Q8N814 137 aa13.1□□□□□ -0.31
CXCL3-201ENST00000296026 CYB561D1Q8N8Q1 229 aa13.1□□□□□ -0.31
CXCL3-201ENST00000296026 TMEM70Q9BUB7 260 aa13.1□□□□□ -0.31
CXCL3-201ENST00000296026 TMEM167BQ9NRX6 74 aa13.1□□□□□ -0.31
CXCL3-201ENST00000296026 CXorf1O96002 111 aa13.09□□□□□ -0.31
CXCL3-201ENST00000296026 SAPCD1Q5SSQ6 148 aa13.09□□□□□ -0.31
CXCL3-201ENST00000296026 AQP10Q96PS8 301 aa13.09□□□□□ -0.31
CXCL3-201ENST00000296026 FAM229AH3BQW9 127 aa13.08□□□□□ -0.32
CXCL3-201ENST00000296026 ACTR3CQ9C0K3 210 aaPredicted RBP13.08□□□□□ -0.32
CXCL3-201ENST00000296026 SH3BGRL3Q9H299 93 aa13.08□□□□□ -0.32
CXCL3-201ENST00000296026 FAT1Q14517 4588 aa13.07□□□□□ -0.32
CXCL3-201ENST00000296026 LAGE3Q14657 143 aa13.07□□□□□ -0.32
CXCL3-201ENST00000296026 Q6ZSN1 163 aa13.07□□□□□ -0.32
CXCL3-201ENST00000296026 TNFSF18Q9UNG2 199 aa13.07□□□□□ -0.32
CXCL3-201ENST00000296026 IGKV3D-20A0A0C4DH25 116 aa13.06□□□□□ -0.32
CXCL3-201ENST00000296026 LINC00479Q96M42 142 aa13.06□□□□□ -0.32
CXCL3-201ENST00000296026 PARLQ9H300 379 aa13.06□□□□□ -0.32
CXCL3-201ENST00000296026 TRAV34A0A0B4J273 112 aa13.05□□□□□ -0.32
CXCL3-201ENST00000296026 A0A1W2PRE2 83 aa13.05□□□□□ -0.32
CXCL3-201ENST00000296026 GAGE12JA6NER3 117 aa13.05□□□□□ -0.32
CXCL3-201ENST00000296026 A8MWV9 139 aa13.05□□□□□ -0.32
CXCL3-201ENST00000296026 S100A4P26447 101 aaKnown RBP13.05□□□□□ -0.32
CXCL3-201ENST00000296026 GAGE1Q13065 139 aa13.05□□□□□ -0.32
CXCL3-201ENST00000296026 GAGE4Q13068 117 aa13.05□□□□□ -0.32
CXCL3-201ENST00000296026 GAGE5Q13069 117 aa13.05□□□□□ -0.32
CXCL3-201ENST00000296026 GAGE13Q4V321 117 aa13.05□□□□□ -0.32
CXCL3-201ENST00000296026 ZFP2Q6ZN57 461 aa13.05□□□□□ -0.32
CXCL3-201ENST00000296026 Q8N3U1 123 aa13.05□□□□□ -0.32
CXCL3-201ENST00000296026 TM2D2Q9BX73 214 aa13.05□□□□□ -0.32
CXCL3-201ENST00000296026 MED28Q9H204 178 aa13.05□□□□□ -0.32
CXCL3-201ENST00000296026 LGALSLQ3ZCW2 172 aaPredicted RBP13.04□□□□□ -0.32
CXCL3-201ENST00000296026 Q5BKY6 102 aa13.04□□□□□ -0.32
CXCL3-201ENST00000296026 FAM30AQ9NZY2 134 aa13.04□□□□□ -0.32
CXCL3-201ENST00000296026 ARL2-SNX15V9GYD0 113 aa13.04□□□□□ -0.32
CXCL3-201ENST00000296026 FABP5P3A8MUU1 101 aa13.03□□□□□ -0.32
CXCL3-201ENST00000296026 IFNA7P01567 189 aa13.03□□□□□ -0.32
CXCL3-201ENST00000296026 LINC00694P0DN24 101 aa13.03□□□□□ -0.32
CXCL3-201ENST00000296026 ASIPP42127 132 aa13.03□□□□□ -0.32
CXCL3-201ENST00000296026 PIK3CD-AS1Q5SR53 167 aa13.03□□□□□ -0.32
CXCL3-201ENST00000296026 OR2T35Q8NGX2 323 aa13.03□□□□□ -0.32
CXCL3-201ENST00000296026 HERC1Q15751 4861 aa13.03□□□□□ -0.32
CXCL3-201ENST00000296026 DMBT1Q9UGM3 2413 aaPredicted RBP13.02□□□□□ -0.32
CXCL3-201ENST00000296026 WFDC2Q14508 124 aa13.02□□□□□ -0.33
CXCL3-201ENST00000296026 JPT2Q9H910 190 aa13.02□□□□□ -0.33
CXCL3-201ENST00000296026 Q9UF83 564 aa13.02□□□□□ -0.33
CXCL3-201ENST00000296026 UBE2G2P60604 165 aa13.01□□□□□ -0.33
CXCL3-201ENST00000296026 ZNF726P1Q15940 193 aa13.01□□□□□ -0.33
CXCL3-201ENST00000296026 RPL7L1Q6DKI1 246 aaKnown RBP13.01□□□□□ -0.33
CXCL3-201ENST00000296026 DAZ4Q86SG3 579 aaKnown RBP13.01□□□□□ -0.33
CXCL3-201ENST00000296026 SAMD10Q9BYL1 202 aa13.01□□□□□ -0.33
CXCL3-201ENST00000296026 DAZ3Q9NR90 486 aaKnown RBP13.01□□□□□ -0.33
CXCL3-201ENST00000296026 IL36BQ9NZH7 164 aa13.01□□□□□ -0.33
CXCL3-201ENST00000296026 TRAV8-3A0A0A6YYJ7 113 aa13□□□□□ -0.33
CXCL3-201ENST00000296026 CTXND1A0A1B0GTU2 59 aa13□□□□□ -0.33
CXCL3-201ENST00000296026 B4DEV8 164 aa13□□□□□ -0.33
CXCL3-201ENST00000296026 PEX7O00628 323 aa13□□□□□ -0.33
CXCL3-201ENST00000296026 C1QBP02746 253 aa13□□□□□ -0.33
CXCL3-201ENST00000296026 UFSP1Q6NVU6 142 aa13□□□□□ -0.33
CXCL3-201ENST00000296026 Q86TA4 180 aa13□□□□□ -0.33
CXCL3-201ENST00000296026 C14orf178Q8N769 122 aaPredicted RBP13□□□□□ -0.33
CXCL3-201ENST00000296026 INO80EQ8NBZ0 244 aaPredicted RBP13□□□□□ -0.33
CXCL3-201ENST00000296026 SRRM2Q9UQ35 2752 aaKnown RBP12.99□□□□□ -0.33
CXCL3-201ENST00000296026 A0A087WWC5 75 aa12.99□□□□□ -0.33
CXCL3-201ENST00000296026 BORCS7-ASMTA0A0B4J1R7 106 aa12.99□□□□□ -0.33
CXCL3-201ENST00000296026 RNF222A6NCQ9 220 aa12.99□□□□□ -0.33
CXCL3-201ENST00000296026 H3BVH4 76 aa12.99□□□□□ -0.33
CXCL3-201ENST00000296026 LECT2O14960 151 aa12.99□□□□□ -0.33
CXCL3-201ENST00000296026 PTTG1O95997 202 aa12.99□□□□□ -0.33
CXCL3-201ENST00000296026 FGF8P55075 233 aaPredicted RBP12.99□□□□□ -0.33
CXCL3-201ENST00000296026 DMRTA1Q5VZB9 504 aa12.99□□□□□ -0.33
CXCL3-201ENST00000296026 GIPP09681 153 aaPredicted RBP12.98□□□□□ -0.33
CXCL3-201ENST00000296026 TOR2AQ5JU69 321 aa12.98□□□□□ -0.33
CXCL3-201ENST00000296026 VPS13BQ7Z7G8 4022 aa12.97□□□□□ -0.33
CXCL3-201ENST00000296026 FLG2Q5D862 2391 aaPredicted RBP12.97□□□□□ -0.33
CXCL3-201ENST00000296026 FXYD6-FXYD2A0A087WZ82 144 aa12.97□□□□□ -0.33
CXCL3-201ENST00000296026 KRBOX1C9JBD0 128 aa12.97□□□□□ -0.33
CXCL3-201ENST00000296026 M0R036 132 aa12.97□□□□□ -0.33
CXCL3-201ENST00000296026 ARMS2P0C7Q2 107 aa12.97□□□□□ -0.33
CXCL3-201ENST00000296026 CRIP1P50238 77 aa12.97□□□□□ -0.33
CXCL3-201ENST00000296026 DNLZQ5SXM8 178 aa12.97□□□□□ -0.33
CXCL3-201ENST00000296026 SYT8Q8NBV8 401 aa12.97□□□□□ -0.33
CXCL3-201ENST00000296026 HIST1H2BAQ96A08 127 aa12.97□□□□□ -0.33
CXCL3-201ENST00000296026 ZC2HC1AQ96GY0 325 aa12.97□□□□□ -0.33
CXCL3-201ENST00000296026 NKX6-2Q9C056 277 aaPredicted RBP12.97□□□□□ -0.33
CXCL3-201ENST00000296026 GRIFINA4D1Z8 144 aa12.96□□□□□ -0.33
CXCL3-201ENST00000296026 FAM74A7A6NL05 159 aa12.96□□□□□ -0.33
CXCL3-201ENST00000296026 RHODO00212 210 aa12.96□□□□□ -0.33
CXCL3-201ENST00000296026 FAM74A4Q5TZK3 123 aa12.96□□□□□ -0.33
CXCL3-201ENST00000296026 OR11H4Q8NGC9 324 aa12.96□□□□□ -0.33
CXCL3-201ENST00000296026 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.95□□□□□ -0.34
CXCL3-201ENST00000296026 SH2D1AO60880 128 aa12.95□□□□□ -0.34
CXCL3-201ENST00000296026 Q6ZSA8 131 aa12.95□□□□□ -0.34
CXCL3-201ENST00000296026 BAALCQ8WXS3 180 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms