RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CACNA1BQ00975 2339 aa9.91□□□□□ -0.82
PTCD1-201ENST00000292478 FSTL3O95633 263 aa9.91□□□□□ -0.82
PTCD1-201ENST00000292478 IGHG2P01859 326 aa9.91□□□□□ -0.82
PTCD1-201ENST00000292478 UBL5Q9BZL1 73 aa9.91□□□□□ -0.82
PTCD1-201ENST00000292478 KMT2EQ8IZD2 1858 aa9.91□□□□□ -0.82
PTCD1-201ENST00000292478 TRAV12-1A0A0B4J245 112 aa9.9□□□□□ -0.82
PTCD1-201ENST00000292478 BLCAPP62952 87 aa9.9□□□□□ -0.82
PTCD1-201ENST00000292478 DAZ2Q13117 558 aaKnown RBP9.9□□□□□ -0.82
PTCD1-201ENST00000292478 DAZ4Q86SG3 579 aaKnown RBP9.9□□□□□ -0.82
PTCD1-201ENST00000292478 DAZ3Q9NR90 486 aaKnown RBP9.9□□□□□ -0.82
PTCD1-201ENST00000292478 CTRLP40313 264 aa9.9□□□□□ -0.82
PTCD1-201ENST00000292478 ETDBQ3ZM63 59 aa9.9□□□□□ -0.82
PTCD1-201ENST00000292478 TMEM126AQ9H061 195 aa9.9□□□□□ -0.82
PTCD1-201ENST00000292478 CFC1BP0CG36 223 aa9.9□□□□□ -0.82
PTCD1-201ENST00000292478 CFC1P0CG37 223 aa9.9□□□□□ -0.82
PTCD1-201ENST00000292478 CGB7P0DN87 165 aa9.9□□□□□ -0.82
PTCD1-201ENST00000292478 Q6ZVH6 145 aa9.9□□□□□ -0.82
PTCD1-201ENST00000292478 SLURP1P55000 103 aa9.9□□□□□ -0.83
PTCD1-201ENST00000292478 DEFB125Q8N687 156 aa9.9□□□□□ -0.83
PTCD1-201ENST00000292478 NPSP0C0P6 89 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 ZFP2Q6ZN57 461 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 SCRT2Q9NQ03 307 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 IGKV1OR2-108A0A075B7D4 117 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 K7EQD1 137 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 NXPH4O95158 308 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 CGB3P0DN86 165 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 ZFP36P26651 326 aaKnown RBP9.89□□□□□ -0.83
PTCD1-201ENST00000292478 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 GTSF1Q8WW33 167 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 CARD19Q96LW7 228 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 MSMPQ1L6U9 139 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 DOCK7Q96N67 2140 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 MALRD1Q5VYJ5 2156 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 NOTCH3Q9UM47 2321 aa9.89□□□□□ -0.83
PTCD1-201ENST00000292478 TMEM131Q92545 1883 aa9.88□□□□□ -0.83
PTCD1-201ENST00000292478 GATA1P15976 413 aaPredicted RBP9.88□□□□□ -0.83
PTCD1-201ENST00000292478 GTF3C1Q12789 2109 aa9.88□□□□□ -0.83
PTCD1-201ENST00000292478 NCKAP5O14513 1909 aa9.88□□□□□ -0.83
PTCD1-201ENST00000292478 RBMY1FQ15415 496 aaKnown RBP9.88□□□□□ -0.83
PTCD1-201ENST00000292478 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.88□□□□□ -0.83
PTCD1-201ENST00000292478 IGKV2-29A2NJV5 120 aaPredicted RBP9.88□□□□□ -0.83
PTCD1-201ENST00000292478 RPL39LQ96EH5 51 aaKnown RBP9.88□□□□□ -0.83
PTCD1-201ENST00000292478 PKIGQ9Y2B9 76 aa9.88□□□□□ -0.83
PTCD1-201ENST00000292478 C2orf70A6NJV1 201 aa9.87□□□□□ -0.83
PTCD1-201ENST00000292478 DEFB136Q30KP8 78 aa9.87□□□□□ -0.83
PTCD1-201ENST00000292478 DENND4AQ7Z401 1863 aa9.87□□□□□ -0.83
PTCD1-201ENST00000292478 CREBBPQ92793 2442 aa9.87□□□□□ -0.83
PTCD1-201ENST00000292478 Q8NA96 180 aa9.87□□□□□ -0.83
PTCD1-201ENST00000292478 Q9H8V8 135 aa9.87□□□□□ -0.83
PTCD1-201ENST00000292478 K7ERJ3 54 aa9.87□□□□□ -0.83
PTCD1-201ENST00000292478 CRLF1O75462 422 aa9.87□□□□□ -0.83
PTCD1-201ENST00000292478 IGHG4P01861 327 aa9.87□□□□□ -0.83
PTCD1-201ENST00000292478 PCP2Q8IVA1 136 aa9.87□□□□□ -0.83
PTCD1-201ENST00000292478 HIGD1BQ9P298 99 aa9.87□□□□□ -0.83
PTCD1-201ENST00000292478 IGHV4OR15-8A0A075B7B6 117 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 A0A087WW49 117 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 ZMAT4Q9H898 229 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 COL4A4P53420 1690 aaPredicted RBP9.86□□□□□ -0.83
PTCD1-201ENST00000292478 DOCK10Q96BY6 2186 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 C19orf71A6NCJ1 209 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 DSCR8Q96T75 97 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 E7EUB6 86 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 H3BMG7 143 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 APRG1Q8IVJ8 170 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 SPTAN1Q13813 2472 aaKnown RBP9.86□□□□□ -0.83
PTCD1-201ENST00000292478 A6NDX4 124 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 ODF3BA8MYP8 253 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 MYCNOSP40205 109 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
PTCD1-201ENST00000292478 TOMM6Q96B49 74 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 TIMM17AQ99595 171 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 MSRB1Q9NZV6 116 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 EML6Q6ZMW3 1958 aa9.86□□□□□ -0.83
PTCD1-201ENST00000292478 NUPR1O60356 82 aa9.85□□□□□ -0.83
PTCD1-201ENST00000292478 C4orf3Q8WVX3 66 aa9.85□□□□□ -0.83
PTCD1-201ENST00000292478 FANCD2OSQ96PS1 177 aa9.85□□□□□ -0.83
PTCD1-201ENST00000292478 KIAA1549LQ6ZVL6 1849 aa9.85□□□□□ -0.83
PTCD1-201ENST00000292478 PRAC2D3DTV9 90 aa9.85□□□□□ -0.83
PTCD1-201ENST00000292478 MRPL23Q16540 153 aaKnown RBP9.85□□□□□ -0.83
PTCD1-201ENST00000292478 MRPL36Q9P0J6 103 aaKnown RBP9.85□□□□□ -0.83
PTCD1-201ENST00000292478 WNK2Q9Y3S1 2297 aa9.85□□□□□ -0.83
PTCD1-201ENST00000292478 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
PTCD1-201ENST00000292478 IGKV1D-37A0A075B6S9 117 aa9.84□□□□□ -0.83
PTCD1-201ENST00000292478 SPART-AS1P0CW21 52 aa9.84□□□□□ -0.83
PTCD1-201ENST00000292478 ATP5G1P05496 136 aa9.84□□□□□ -0.83
PTCD1-201ENST00000292478 XCL1P47992 114 aa9.84□□□□□ -0.83
PTCD1-201ENST00000292478 ICOSQ9Y6W8 199 aa9.84□□□□□ -0.83
PTCD1-201ENST00000292478 ARFGEF3Q5TH69 2177 aa9.84□□□□□ -0.84
PTCD1-201ENST00000292478 PCNX2A6NKB5 2137 aa9.83□□□□□ -0.84
PTCD1-201ENST00000292478 GAGE12HA6NDE8 117 aa9.83□□□□□ -0.84
PTCD1-201ENST00000292478 Q8N1Y9 231 aa9.83□□□□□ -0.84
PTCD1-201ENST00000292478 ZNF503Q96F45 646 aa9.83□□□□□ -0.84
PTCD1-201ENST00000292478 A0A096LPF7 62 aa9.83□□□□□ -0.84
PTCD1-201ENST00000292478 ACYP1P07311 99 aa9.83□□□□□ -0.84
PTCD1-201ENST00000292478 TNFRSF13BO14836 293 aaPredicted RBP9.83□□□□□ -0.84
PTCD1-201ENST00000292478 C9orf153Q5TBE3 101 aa9.83□□□□□ -0.84
PTCD1-201ENST00000292478 IGLL5B9A064 214 aa9.82□□□□□ -0.84
PTCD1-201ENST00000292478 ANKRD39Q53RE8 183 aa9.82□□□□□ -0.84
PTCD1-201ENST00000292478 CRIP3Q6Q6R5 217 aa9.82□□□□□ -0.84
PTCD1-201ENST00000292478 CITED1Q99966 193 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms