RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 PPBPP02775 128 aa8.64□□□□□ -1.03
CHRNB3-201ENST00000289957 IFI27P40305 119 aaPredicted RBP8.64□□□□□ -1.03
CHRNB3-201ENST00000289957 MUC21A0A0G2JKD1 596 aa8.64□□□□□ -1.03
CHRNB3-201ENST00000289957 MUC21A0A140T8X8 626 aa8.64□□□□□ -1.03
CHRNB3-201ENST00000289957 LINC01619G3V211 115 aa8.64□□□□□ -1.03
CHRNB3-201ENST00000289957 NDUFA4O00483 81 aa8.64□□□□□ -1.03
CHRNB3-201ENST00000289957 MUC21Q5SSG8 566 aa8.64□□□□□ -1.03
CHRNB3-201ENST00000289957 IGFL4Q6B9Z1 124 aa8.64□□□□□ -1.03
CHRNB3-201ENST00000289957 OR9G4Q8NGQ1 327 aa8.64□□□□□ -1.03
CHRNB3-201ENST00000289957 MDFIQ99750 246 aa8.64□□□□□ -1.03
CHRNB3-201ENST00000289957 CITED1Q99966 193 aa8.64□□□□□ -1.03
CHRNB3-201ENST00000289957 SMAD5-AS1Q9Y6J3 95 aa8.64□□□□□ -1.03
CHRNB3-201ENST00000289957 IGKV2-40A0A087WW87 121 aaPredicted RBP8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 NCR2O95944 276 aa8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 IGKV2D-40P01614 121 aaPredicted RBP8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 Q6ZVH6 145 aa8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 AMN1Q8IY45 258 aa8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 BOD1L2Q8IYS8 172 aa8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 OR4C5Q8NGB2 326 aa8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 MRPL53Q96EL3 112 aaKnown RBP8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 SLC50A1Q9BRV3 221 aa8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 TP73-AS1Q9UF72 201 aa8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 DNHD1Q96M86 4753 aa8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 BUB3O43684 328 aa8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 CDKN1BP46527 198 aa8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 RBX1P62877 108 aa8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 FHL3Q13643 280 aa8.63□□□□□ -1.03
CHRNB3-201ENST00000289957 VAMP3Q15836 100 aa8.62□□□□□ -1.03
CHRNB3-201ENST00000289957 GPHB5Q86YW7 130 aa8.62□□□□□ -1.03
CHRNB3-201ENST00000289957 ANKRD39Q53RE8 183 aa8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 RNASE8Q8TDE3 154 aaKnown RBP8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 ATP6V0BQ99437 205 aa8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 ASCL2Q99929 193 aa8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 TPPP3Q9BW30 176 aa8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 DAZ1Q9NQZ3 744 aaKnown RBP8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 HLA-DMBP28068 263 aa8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 HSD52Q0P140 79 aa8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 TMEM97Q5BJF2 176 aa8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 IFI27L1Q96BM0 104 aa8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 RNF185Q96GF1 192 aa8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 METTL26Q96S19 204 aa8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 RHPN1-AS1Q9BWJ2 59 aa8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 MAP1LC3AQ9H492 121 aa8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 NXT2Q9NPJ8 142 aaKnown RBP8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 U3KQE9 123 aa8.61□□□□□ -1.03
CHRNB3-201ENST00000289957 NPYP01303 97 aa8.6□□□□□ -1.03
CHRNB3-201ENST00000289957 HLA-DRB4P13762 266 aa8.6□□□□□ -1.03
CHRNB3-201ENST00000289957 ZNF80P51504 273 aaPredicted RBP8.6□□□□□ -1.03
CHRNB3-201ENST00000289957 DEFB1P60022 68 aa8.6□□□□□ -1.03
CHRNB3-201ENST00000289957 FAM106AQ4KMX7 169 aa8.6□□□□□ -1.03
CHRNB3-201ENST00000289957 OR8A1Q8NGG7 326 aa8.6□□□□□ -1.03
CHRNB3-201ENST00000289957 HLA-DRB4X5D2U9 266 aa8.6□□□□□ -1.03
CHRNB3-201ENST00000289957 IGHV7-4-1A0A0J9YVY3 117 aa8.6□□□□□ -1.03
CHRNB3-201ENST00000289957 FABP5P3A8MUU1 101 aa8.6□□□□□ -1.03
CHRNB3-201ENST00000289957 CKS2P33552 79 aa8.6□□□□□ -1.03
CHRNB3-201ENST00000289957 ZNF575Q86XF7 245 aa8.6□□□□□ -1.03
CHRNB3-201ENST00000289957 NDUFA11Q86Y39 141 aa8.6□□□□□ -1.03
CHRNB3-201ENST00000289957 VGLL1Q99990 258 aa8.6□□□□□ -1.03
CHRNB3-201ENST00000289957 TMSB15BA0A087X1C1 80 aa8.59□□□□□ -1.03
CHRNB3-201ENST00000289957 A6NDN8 102 aa8.59□□□□□ -1.03
CHRNB3-201ENST00000289957 PRSS47A8MTI9 375 aa8.59□□□□□ -1.03
CHRNB3-201ENST00000289957 H0Y8G0 127 aa8.59□□□□□ -1.03
CHRNB3-201ENST00000289957 H3BRM9 83 aa8.59□□□□□ -1.03
CHRNB3-201ENST00000289957 CACNG7P62955 275 aa8.59□□□□□ -1.03
CHRNB3-201ENST00000289957 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.59□□□□□ -1.03
CHRNB3-201ENST00000289957 GLMPQ8WWB7 406 aa8.59□□□□□ -1.03
CHRNB3-201ENST00000289957 MCRIP2Q9BUT9 160 aaKnown RBP8.59□□□□□ -1.03
CHRNB3-201ENST00000289957 SMPXQ9UHP9 88 aa8.59□□□□□ -1.03
CHRNB3-201ENST00000289957 RNF182Q8N6D2 247 aa8.59□□□□□ -1.03
CHRNB3-201ENST00000289957 ZMAT4Q9H898 229 aa8.59□□□□□ -1.03
CHRNB3-201ENST00000289957 LOC389332A0A1B0GUA5 103 aa8.58□□□□□ -1.04
CHRNB3-201ENST00000289957 FCER1GP30273 86 aa8.58□□□□□ -1.04
CHRNB3-201ENST00000289957 KIR3DS1Q14943 382 aa8.58□□□□□ -1.04
CHRNB3-201ENST00000289957 TWIST1Q15672 202 aa8.58□□□□□ -1.04
CHRNB3-201ENST00000289957 Q8TAT8 98 aa8.58□□□□□ -1.04
CHRNB3-201ENST00000289957 HIGD1BQ9P298 99 aa8.58□□□□□ -1.04
CHRNB3-201ENST00000289957 NOTCH1P46531 2555 aa8.58□□□□□ -1.04
CHRNB3-201ENST00000289957 RPL11P62913 178 aaKnown RBP8.57□□□□□ -1.04
CHRNB3-201ENST00000289957 C7orf71A4D174 169 aa8.57□□□□□ -1.04
CHRNB3-201ENST00000289957 LGALS9O00182 355 aa8.57□□□□□ -1.04
CHRNB3-201ENST00000289957 WFDC3Q8IUB2 231 aa8.57□□□□□ -1.04
CHRNB3-201ENST00000289957 C3orf56Q8N813 242 aa8.57□□□□□ -1.04
CHRNB3-201ENST00000289957 UFC1Q9Y3C8 167 aa8.57□□□□□ -1.04
CHRNB3-201ENST00000289957 AGRNO00468 2067 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 C9orf118A6NHY6 69 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 CBY3A6NI87 242 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 PF4P02776 101 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 LINC00482Q8N8I6 264 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 TIMM8BQ9Y5J9 83 aaPredicted RBP8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 NBEAL1Q6ZS30 2694 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 IGHV4-4A0A075B6R2 117 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 TRAV8-6A0A0B4J262 113 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 OVOL1O14753 267 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 ATP5LO75964 103 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 AMMECR1LQ6DCA0 310 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 UFSP1Q6NVU6 142 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 Q8N8P6 123 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 TMEM158Q8WZ71 300 aa8.56□□□□□ -1.04
CHRNB3-201ENST00000289957 IGLV2-18A0A075B6J9 118 aa8.55□□□□□ -1.04
CHRNB3-201ENST00000289957 SMKR1H3BMG3 65 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms