RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 GGTLC3B5MD39 225 aa6.56□□□□□ -1.36
HMHB1-201ENST00000289448 DIRC3C9JPN6 131 aa6.56□□□□□ -1.36
HMHB1-201ENST00000289448 MUC21Q5SSG8 566 aa6.56□□□□□ -1.36
HMHB1-201ENST00000289448 LYPD1Q8N2G4 141 aa6.56□□□□□ -1.36
HMHB1-201ENST00000289448 SDF2L1Q9HCN8 221 aa6.56□□□□□ -1.36
HMHB1-201ENST00000289448 MDFICQ9P1T7 246 aa6.56□□□□□ -1.36
HMHB1-201ENST00000289448 C16orf90A8MZG2 172 aa6.55□□□□□ -1.36
HMHB1-201ENST00000289448 CSN1S1P47710 185 aa6.55□□□□□ -1.36
HMHB1-201ENST00000289448 SUMO1P63165 101 aaKnown RBP6.55□□□□□ -1.36
HMHB1-201ENST00000289448 FHL2Q14192 279 aa6.55□□□□□ -1.36
HMHB1-201ENST00000289448 PGPA6NDG6 321 aa6.54□□□□□ -1.36
HMHB1-201ENST00000289448 C9JCJ5 164 aa6.54□□□□□ -1.36
HMHB1-201ENST00000289448 PAX4O43316 350 aa6.54□□□□□ -1.36
HMHB1-201ENST00000289448 ADIRFQ15847 76 aa6.54□□□□□ -1.36
HMHB1-201ENST00000289448 TTC32Q5I0X7 151 aa6.54□□□□□ -1.36
HMHB1-201ENST00000289448 Q6AWC8 147 aa6.54□□□□□ -1.36
HMHB1-201ENST00000289448 CBLN2Q8IUK8 224 aa6.54□□□□□ -1.36
HMHB1-201ENST00000289448 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.54□□□□□ -1.36
HMHB1-201ENST00000289448 C5orf17Q8NAS9 161 aa6.54□□□□□ -1.36
HMHB1-201ENST00000289448 HIST1H2BAQ96A08 127 aa6.54□□□□□ -1.36
HMHB1-201ENST00000289448 C8orf49Q96NF6 230 aa6.54□□□□□ -1.36
HMHB1-201ENST00000289448 CTDSP1Q9GZU7 261 aa6.54□□□□□ -1.36
HMHB1-201ENST00000289448 OTORQ9NRC9 128 aa6.54□□□□□ -1.36
HMHB1-201ENST00000289448 LY96Q9Y6Y9 160 aa6.54□□□□□ -1.36
HMHB1-201ENST00000289448 A0A1W2PPQ1 181 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 MT-ND4LP03901 98 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 AKR1C3P42330 323 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 RPL35P42766 123 aaKnown RBP6.53□□□□□ -1.36
HMHB1-201ENST00000289448 CRYBA4P53673 196 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 KRTAP10-2P60368 255 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 RPL23P62829 140 aaKnown RBP6.53□□□□□ -1.36
HMHB1-201ENST00000289448 GNG5P63218 68 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 ZNF415Q09FC8 603 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 TMEM183BQ1AE95 376 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 GOLT1AQ6ZVE7 132 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 SPATA12Q7Z6I5 190 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 TMEM183AQ8IXX5 376 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 C15orf54Q8N8G6 183 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 ZNF479Q96JC4 524 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 DERL1Q9BUN8 251 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 TMEM242Q9NWH2 141 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 PRO0255Q9UI72 69 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 RPH3ALQ9UNE2 315 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 HHLA3Q9XRX5 114 aa6.53□□□□□ -1.36
HMHB1-201ENST00000289448 TRAV8-1A0A0A6YYK1 113 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 PEX7O00628 323 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 GNRH2O43555 120 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 NXPH4O95158 308 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 S100A9P06702 114 aaKnown RBP6.52□□□□□ -1.37
HMHB1-201ENST00000289448 LINC00315P59091 139 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 TDRG1Q3Y452 100 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 LYPD5Q6UWN5 251 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 Q6ZRN7 208 aaPredicted RBP6.52□□□□□ -1.37
HMHB1-201ENST00000289448 LINC01551Q86U37 167 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 RASL10AQ92737 203 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 ANAPC16Q96DE5 110 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 EPDR1Q9UM22 224 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 LENEPQ9Y5L5 61 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 TNFRSF18Q9Y5U5 241 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 ICOSQ9Y6W8 199 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 FAT1Q14517 4588 aa6.52□□□□□ -1.37
HMHB1-201ENST00000289448 TRBV20OR9-2A0A075B6H5 130 aa6.51□□□□□ -1.37
HMHB1-201ENST00000289448 IGHV3-16A0A0C4DH30 117 aa6.51□□□□□ -1.37
HMHB1-201ENST00000289448 PPP1R2P9O14990 202 aa6.51□□□□□ -1.37
HMHB1-201ENST00000289448 SIVA1O15304 175 aa6.51□□□□□ -1.37
HMHB1-201ENST00000289448 BTF3P20290 206 aaKnown RBP6.51□□□□□ -1.37
HMHB1-201ENST00000289448 GNG4P50150 75 aa6.51□□□□□ -1.37
HMHB1-201ENST00000289448 CENPWQ5EE01 88 aa6.51□□□□□ -1.37
HMHB1-201ENST00000289448 FAM159AQ6UWV7 190 aa6.51□□□□□ -1.37
HMHB1-201ENST00000289448 CMTM2Q8TAZ6 248 aa6.51□□□□□ -1.37
HMHB1-201ENST00000289448 ISOC2Q96AB3 205 aa6.51□□□□□ -1.37
HMHB1-201ENST00000289448 SGK494Q96LW2 274 aa6.51□□□□□ -1.37
HMHB1-201ENST00000289448 NAGKQ9UJ70 344 aa6.51□□□□□ -1.37
HMHB1-201ENST00000289448 TRGV11A0A075B6L2 103 aa6.5□□□□□ -1.37
HMHB1-201ENST00000289448 TRGV4A0A0C4DH28 118 aa6.5□□□□□ -1.37
HMHB1-201ENST00000289448 COLCA2A8K830 154 aa6.5□□□□□ -1.37
HMHB1-201ENST00000289448 K7EQD1 137 aa6.5□□□□□ -1.37
HMHB1-201ENST00000289448 CDK2AP2O75956 126 aa6.5□□□□□ -1.37
HMHB1-201ENST00000289448 TCRAP04437 139 aa6.5□□□□□ -1.37
HMHB1-201ENST00000289448 SLAQ13239 276 aa6.5□□□□□ -1.37
HMHB1-201ENST00000289448 MRPL23Q16540 153 aaKnown RBP6.5□□□□□ -1.37
HMHB1-201ENST00000289448 ARL6IP6Q8N6S5 226 aa6.5□□□□□ -1.37
HMHB1-201ENST00000289448 OCC1Q8TAD7 63 aa6.5□□□□□ -1.37
HMHB1-201ENST00000289448 SMIM12Q96EX1 92 aa6.5□□□□□ -1.37
HMHB1-201ENST00000289448 SPXQ9BT56 116 aa6.5□□□□□ -1.37
HMHB1-201ENST00000289448 C11orf21Q9P2W6 132 aa6.5□□□□□ -1.37
HMHB1-201ENST00000289448 TRAV21A0A0B4J279 112 aa6.49□□□□□ -1.37
HMHB1-201ENST00000289448 TRBV6-1A0A0K0K1D8 114 aa6.49□□□□□ -1.37
HMHB1-201ENST00000289448 LOC100131303A0A0U1RQF7 123 aa6.49□□□□□ -1.37
HMHB1-201ENST00000289448 SERTM2A0A1B0GWG4 89 aa6.49□□□□□ -1.37
HMHB1-201ENST00000289448 K7EQM0 130 aa6.49□□□□□ -1.37
HMHB1-201ENST00000289448 TYMSP04818 313 aa6.49□□□□□ -1.37
HMHB1-201ENST00000289448 FUSP35637 526 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMHB1-201ENST00000289448 ZNF80P51504 273 aaPredicted RBP6.49□□□□□ -1.37
HMHB1-201ENST00000289448 UBE2G1P62253 170 aa6.49□□□□□ -1.37
HMHB1-201ENST00000289448 NEGR1Q7Z3B1 354 aa6.49□□□□□ -1.37
HMHB1-201ENST00000289448 FMC1Q96HJ9 113 aa6.49□□□□□ -1.37
HMHB1-201ENST00000289448 YPEL4Q96NS1 127 aa6.49□□□□□ -1.37
HMHB1-201ENST00000289448 TMA7Q9Y2S6 64 aaKnown RBP6.49□□□□□ -1.37
HMHB1-201ENST00000289448 TRAV4A0A0B4J268 109 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms