RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 ATP6V0CP27449 155 aa9.44□□□□□ -0.9
TPM1-202ENST00000288398 LGALSLQ3ZCW2 172 aaPredicted RBP9.44□□□□□ -0.9
TPM1-202ENST00000288398 ZNF506Q5JVG8 444 aa9.44□□□□□ -0.9
TPM1-202ENST00000288398 TMEM75Q8N9X5 138 aa9.44□□□□□ -0.9
TPM1-202ENST00000288398 INO80EQ8NBZ0 244 aaPredicted RBP9.44□□□□□ -0.9
TPM1-202ENST00000288398 MED28Q9H204 178 aa9.44□□□□□ -0.9
TPM1-202ENST00000288398 EPDR1Q9UM22 224 aa9.44□□□□□ -0.9
TPM1-202ENST00000288398 ALG5Q9Y673 324 aa9.44□□□□□ -0.9
TPM1-202ENST00000288398 A8MWV9 139 aa9.43□□□□□ -0.9
TPM1-202ENST00000288398 SMR3BP02814 79 aaPredicted RBP9.43□□□□□ -0.9
TPM1-202ENST00000288398 ASIPP42127 132 aa9.43□□□□□ -0.9
TPM1-202ENST00000288398 ZNF80P51504 273 aaPredicted RBP9.43□□□□□ -0.9
TPM1-202ENST00000288398 TOR2AQ5JU69 321 aa9.43□□□□□ -0.9
TPM1-202ENST00000288398 Q8N814 137 aa9.43□□□□□ -0.9
TPM1-202ENST00000288398 PTH2Q96A98 100 aa9.43□□□□□ -0.9
TPM1-202ENST00000288398 C9orf85Q96MD7 179 aa9.43□□□□□ -0.9
TPM1-202ENST00000288398 AQP10Q96PS8 301 aa9.43□□□□□ -0.9
TPM1-202ENST00000288398 TMEM70Q9BUB7 260 aa9.43□□□□□ -0.9
TPM1-202ENST00000288398 TNFSF18Q9UNG2 199 aa9.43□□□□□ -0.9
TPM1-202ENST00000288398 BORCS7-ASMTA0A0B4J1R7 106 aa9.42□□□□□ -0.9
TPM1-202ENST00000288398 PGPEP1LA6NFU8 196 aa9.42□□□□□ -0.9
TPM1-202ENST00000288398 GGTLC3B5MD39 225 aa9.42□□□□□ -0.9
TPM1-202ENST00000288398 LAGE3Q14657 143 aa9.42□□□□□ -0.9
TPM1-202ENST00000288398 RGS21Q2M5E4 152 aa9.42□□□□□ -0.9
TPM1-202ENST00000288398 DPPA3Q6W0C5 159 aa9.42□□□□□ -0.9
TPM1-202ENST00000288398 C11orf21Q9P2W6 132 aa9.42□□□□□ -0.9
TPM1-202ENST00000288398 GAGE12JA6NER3 117 aa9.41□□□□□ -0.9
TPM1-202ENST00000288398 FABP5P3A8MUU1 101 aa9.41□□□□□ -0.9
TPM1-202ENST00000288398 PTTG1O95997 202 aa9.41□□□□□ -0.9
TPM1-202ENST00000288398 GAGE1Q13065 139 aa9.41□□□□□ -0.9
TPM1-202ENST00000288398 GAGE4Q13068 117 aa9.41□□□□□ -0.9
TPM1-202ENST00000288398 GAGE5Q13069 117 aa9.41□□□□□ -0.9
TPM1-202ENST00000288398 GAGE13Q4V321 117 aa9.41□□□□□ -0.9
TPM1-202ENST00000288398 ZFP2Q6ZN57 461 aa9.41□□□□□ -0.9
TPM1-202ENST00000288398 Q6ZSN1 163 aa9.41□□□□□ -0.9
TPM1-202ENST00000288398 SYT8Q8NBV8 401 aa9.41□□□□□ -0.9
TPM1-202ENST00000288398 SUN5Q8TC36 379 aa9.41□□□□□ -0.9
TPM1-202ENST00000288398 URGCP-MRPS24S4R325 110 aa9.41□□□□□ -0.9
TPM1-202ENST00000288398 A0A087WWC5 75 aa9.4□□□□□ -0.9
TPM1-202ENST00000288398 TRAV8-3A0A0A6YYJ7 113 aa9.4□□□□□ -0.9
TPM1-202ENST00000288398 A0A1W2PRE2 83 aa9.4□□□□□ -0.9
TPM1-202ENST00000288398 LRCOL1A6NCL2 159 aa9.4□□□□□ -0.9
TPM1-202ENST00000288398 FGF8P55075 233 aaPredicted RBP9.4□□□□□ -0.9
TPM1-202ENST00000288398 DMBT1Q9UGM3 2413 aaPredicted RBP9.39□□□□□ -0.91
TPM1-202ENST00000288398 TRAV34A0A0B4J273 112 aa9.39□□□□□ -0.91
TPM1-202ENST00000288398 B4DEV8 164 aa9.39□□□□□ -0.91
TPM1-202ENST00000288398 IGLV2-11P01706 119 aa9.39□□□□□ -0.91
TPM1-202ENST00000288398 SEC11BP0C7V7 166 aa9.39□□□□□ -0.91
TPM1-202ENST00000288398 RNASE3P12724 160 aaKnown RBP9.39□□□□□ -0.91
TPM1-202ENST00000288398 UBE2G2P60604 165 aa9.39□□□□□ -0.91
TPM1-202ENST00000288398 HAMPP81172 84 aa9.39□□□□□ -0.91
TPM1-202ENST00000288398 PIK3CD-AS1Q5SR53 167 aa9.39□□□□□ -0.91
TPM1-202ENST00000288398 KCNIP4Q6PIL6 250 aa9.39□□□□□ -0.91
TPM1-202ENST00000288398 OR2T35Q8NGX2 323 aa9.39□□□□□ -0.91
TPM1-202ENST00000288398 RMI2Q96E14 147 aa9.39□□□□□ -0.91
TPM1-202ENST00000288398 NKX6-2Q9C056 277 aaPredicted RBP9.39□□□□□ -0.91
TPM1-202ENST00000288398 PARLQ9H300 379 aa9.39□□□□□ -0.91
TPM1-202ENST00000288398 ARL2-SNX15V9GYD0 113 aa9.39□□□□□ -0.91
TPM1-202ENST00000288398 FXYD6-FXYD2A0A087WZ82 144 aa9.38□□□□□ -0.91
TPM1-202ENST00000288398 CTXND1A0A1B0GTU2 59 aa9.38□□□□□ -0.91
TPM1-202ENST00000288398 RHODO00212 210 aa9.38□□□□□ -0.91
TPM1-202ENST00000288398 PEX7O00628 323 aa9.38□□□□□ -0.91
TPM1-202ENST00000288398 AKR1C8PQ5T2L2 129 aa9.38□□□□□ -0.91
TPM1-202ENST00000288398 COX11Q9Y6N1 276 aa9.38□□□□□ -0.91
TPM1-202ENST00000288398 H3BVH4 76 aa9.37□□□□□ -0.91
TPM1-202ENST00000288398 GIPP09681 153 aaPredicted RBP9.37□□□□□ -0.91
TPM1-202ENST00000288398 UBE2G1P62253 170 aa9.37□□□□□ -0.91
TPM1-202ENST00000288398 FAM74A4Q5TZK3 123 aa9.37□□□□□ -0.91
TPM1-202ENST00000288398 Q86TA4 180 aa9.37□□□□□ -0.91
TPM1-202ENST00000288398 OR11H4Q8NGC9 324 aa9.37□□□□□ -0.91
TPM1-202ENST00000288398 HIST1H2BAQ96A08 127 aa9.37□□□□□ -0.91
TPM1-202ENST00000288398 LINC00479Q96M42 142 aa9.37□□□□□ -0.91
TPM1-202ENST00000288398 IL36BQ9NZH7 164 aa9.37□□□□□ -0.91
TPM1-202ENST00000288398 IGKV3D-20A0A0C4DH25 116 aa9.36□□□□□ -0.91
TPM1-202ENST00000288398 M0R036 132 aa9.36□□□□□ -0.91
TPM1-202ENST00000288398 RPL7L1Q6DKI1 246 aaKnown RBP9.36□□□□□ -0.91
TPM1-202ENST00000288398 PHLDA3Q9Y5J5 127 aa9.36□□□□□ -0.91
TPM1-202ENST00000288398 C1QBP02746 253 aa9.35□□□□□ -0.91
TPM1-202ENST00000288398 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
TPM1-202ENST00000288398 TPT1P13693 172 aaKnown RBP9.35□□□□□ -0.91
TPM1-202ENST00000288398 FAM162BQ5T6X4 162 aa9.35□□□□□ -0.91
TPM1-202ENST00000288398 STOML3Q8TAV4 291 aa9.35□□□□□ -0.91
TPM1-202ENST00000288398 ZFP30Q9Y2G7 519 aa9.35□□□□□ -0.91
TPM1-202ENST00000288398 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.34□□□□□ -0.91
TPM1-202ENST00000288398 A0A087WX48 190 aa9.34□□□□□ -0.91
TPM1-202ENST00000288398 J3QL48 77 aa9.34□□□□□ -0.91
TPM1-202ENST00000288398 LECT2O14960 151 aa9.34□□□□□ -0.91
TPM1-202ENST00000288398 ARMS2P0C7Q2 107 aa9.34□□□□□ -0.91
TPM1-202ENST00000288398 DAZ4Q86SG3 579 aaKnown RBP9.34□□□□□ -0.91
TPM1-202ENST00000288398 FMC1Q96HJ9 113 aa9.34□□□□□ -0.91
TPM1-202ENST00000288398 DAZ3Q9NR90 486 aaKnown RBP9.34□□□□□ -0.91
TPM1-202ENST00000288398 IGKV2D-24A0A075B6R9 120 aa9.33□□□□□ -0.92
TPM1-202ENST00000288398 A0A1B0GVG6 124 aa9.33□□□□□ -0.92
TPM1-202ENST00000288398 GRIFINA4D1Z8 144 aa9.33□□□□□ -0.92
TPM1-202ENST00000288398 FAM74A7A6NL05 159 aa9.33□□□□□ -0.92
TPM1-202ENST00000288398 M0R381 172 aa9.33□□□□□ -0.92
TPM1-202ENST00000288398 SH2D1AO60880 128 aa9.33□□□□□ -0.92
TPM1-202ENST00000288398 ELOBQ15370 118 aa9.33□□□□□ -0.92
TPM1-202ENST00000288398 DMRTA1Q5VZB9 504 aa9.33□□□□□ -0.92
TPM1-202ENST00000288398 Q8N3U1 123 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms