RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZNF491Q8N8L2 437 aa9.87□□□□□ -0.83
SLC6A1-201ENST00000287766 MRAPQ8TCY5 172 aa9.87□□□□□ -0.83
SLC6A1-201ENST00000287766 PTH2Q96A98 100 aa9.87□□□□□ -0.83
SLC6A1-201ENST00000287766 RNF5Q99942 180 aa9.87□□□□□ -0.83
SLC6A1-201ENST00000287766 SCRT2Q9NQ03 307 aa9.87□□□□□ -0.83
SLC6A1-201ENST00000287766 KNCNA6PVL3 124 aa9.86□□□□□ -0.83
SLC6A1-201ENST00000287766 IGKV1-17P01599 117 aa9.86□□□□□ -0.83
SLC6A1-201ENST00000287766 HTN3P15516 51 aa9.86□□□□□ -0.83
SLC6A1-201ENST00000287766 MALP21145 153 aa9.86□□□□□ -0.83
SLC6A1-201ENST00000287766 KLF5Q13887 457 aaPredicted RBP9.86□□□□□ -0.83
SLC6A1-201ENST00000287766 HAMPP81172 84 aa9.86□□□□□ -0.83
SLC6A1-201ENST00000287766 IGF2BP2-AS1Q96M15 143 aa9.86□□□□□ -0.83
SLC6A1-201ENST00000287766 LEPROTO15243 131 aa9.86□□□□□ -0.83
SLC6A1-201ENST00000287766 TMEM126AQ9H061 195 aa9.86□□□□□ -0.83
SLC6A1-201ENST00000287766 ZNF462Q96JM2 2506 aa9.86□□□□□ -0.83
SLC6A1-201ENST00000287766 LINC01545Q5VT33 79 aa9.86□□□□□ -0.83
SLC6A1-201ENST00000287766 TRAV41A0A0B4J266 112 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 J3QQQ9 107 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 IGHV3-53P01767 116 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 HERV-K104P63124 156 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 C20orf78Q9BR46 151 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 USP9XQ93008 2570 aaPredicted RBP9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 PDE6HQ13956 83 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 CR1LQ2VPA4 569 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 C6orf226Q5I0X4 101 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 RASL10AQ92737 203 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 KAAG1Q9UBP8 84 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 SDHAF1A6NFY7 115 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 LINC00477Q96M19 166 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 SMIM2Q9BVW6 85 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 NDUFA12Q9UI09 145 aa9.85□□□□□ -0.83
SLC6A1-201ENST00000287766 H3BUX3 64 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 SOCS3O14543 225 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 IGLV2-23P01705 113 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 C9orf139Q6ZV77 190 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 GTSF1Q8WW33 167 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 TINCRA0A1B0GVN0 87 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 CFC1BP0CG36 223 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 CFC1P0CG37 223 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 GNLYP22749 145 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 KLHL30-AS1Q8NEE0 82 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 DPH3Q96FX2 82 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 ABCA2Q9BZC7 2435 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 TRGV4A0A0C4DH28 118 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 GP9P14770 177 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 WIPF2Q8TF74 440 aaPredicted RBP9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 VWC2LB2RUY7 222 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 M0R1W7 72 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 LTAP01374 205 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 LINC00322Q6ZN03 302 aaPredicted RBP9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 SPATA12Q7Z6I5 190 aa9.84□□□□□ -0.83
SLC6A1-201ENST00000287766 TRGV11A0A075B6L2 103 aa9.83□□□□□ -0.84
SLC6A1-201ENST00000287766 TEN1Q86WV5 123 aa9.83□□□□□ -0.84
SLC6A1-201ENST00000287766 RNF183Q96D59 192 aa9.83□□□□□ -0.84
SLC6A1-201ENST00000287766 H3BRN7 92 aa9.83□□□□□ -0.84
SLC6A1-201ENST00000287766 DUSP14O95147 198 aaKnown RBP9.83□□□□□ -0.84
SLC6A1-201ENST00000287766 FOXI1Q12951 378 aa9.83□□□□□ -0.84
SLC6A1-201ENST00000287766 COL5A1P20908 1838 aaPredicted RBP9.83□□□□□ -0.84
SLC6A1-201ENST00000287766 IGKV1D-37A0A075B6S9 117 aa9.83□□□□□ -0.84
SLC6A1-201ENST00000287766 A0A087WX48 190 aa9.83□□□□□ -0.84
SLC6A1-201ENST00000287766 Q8N7P7 452 aa9.83□□□□□ -0.84
SLC6A1-201ENST00000287766 DNAJC30Q96LL9 226 aa9.83□□□□□ -0.84
SLC6A1-201ENST00000287766 K7EIM0 57 aa9.83□□□□□ -0.84
SLC6A1-201ENST00000287766 GHRHP01286 108 aa9.83□□□□□ -0.84
SLC6A1-201ENST00000287766 IGLV2-8P01709 118 aa9.82□□□□□ -0.84
SLC6A1-201ENST00000287766 PRB1P04280 392 aa9.82□□□□□ -0.84
SLC6A1-201ENST00000287766 RBM3P98179 157 aaKnown RBP9.82□□□□□ -0.84
SLC6A1-201ENST00000287766 NAV2Q8IVL1 2488 aa9.82□□□□□ -0.84
SLC6A1-201ENST00000287766 MAPK1IP1LQ8NDC0 245 aa9.82□□□□□ -0.84
SLC6A1-201ENST00000287766 PFN2P35080 140 aa9.82□□□□□ -0.84
SLC6A1-201ENST00000287766 MINOS1Q5TGZ0 78 aa9.82□□□□□ -0.84
SLC6A1-201ENST00000287766 MSRB1Q9NZV6 116 aa9.82□□□□□ -0.84
SLC6A1-201ENST00000287766 TP53TG3Q9ULZ0 132 aa9.82□□□□□ -0.84
SLC6A1-201ENST00000287766 MINOS1-NBL1R4GNA1 71 aa9.82□□□□□ -0.84
SLC6A1-201ENST00000287766 C11orf44Q8N8P7 122 aa9.81□□□□□ -0.84
SLC6A1-201ENST00000287766 FAM236AA0A1B0GUQ0 79 aa9.81□□□□□ -0.84
SLC6A1-201ENST00000287766 FAM236BA0A1B0GV22 79 aa9.81□□□□□ -0.84
SLC6A1-201ENST00000287766 I3L2K1 104 aa9.81□□□□□ -0.84
SLC6A1-201ENST00000287766 RNASE13Q5GAN3 156 aaKnown RBP9.81□□□□□ -0.84
SLC6A1-201ENST00000287766 GDF5OSQ5U4N7 250 aa9.81□□□□□ -0.84
SLC6A1-201ENST00000287766 Q8NA96 180 aa9.81□□□□□ -0.84
SLC6A1-201ENST00000287766 SYNJ2BPP57105 145 aa9.8□□□□□ -0.84
SLC6A1-201ENST00000287766 RPL36AP83881 106 aaKnown RBP9.8□□□□□ -0.84
SLC6A1-201ENST00000287766 RPL36ALQ969Q0 106 aaKnown RBP9.8□□□□□ -0.84
SLC6A1-201ENST00000287766 TRGV1A0A0A0MS02 117 aa9.8□□□□□ -0.84
SLC6A1-201ENST00000287766 A0A1W2PRX2 142 aa9.8□□□□□ -0.84
SLC6A1-201ENST00000287766 INS-IGF2F8WCM5 200 aa9.8□□□□□ -0.84
SLC6A1-201ENST00000287766 INSP01308 110 aa9.8□□□□□ -0.84
SLC6A1-201ENST00000287766 EGR2P11161 476 aaPredicted RBP9.8□□□□□ -0.84
SLC6A1-201ENST00000287766 IGLV1-47P01700 117 aa9.8□□□□□ -0.84
SLC6A1-201ENST00000287766 TMEM14CQ9P0S9 112 aa9.8□□□□□ -0.84
SLC6A1-201ENST00000287766 C2orf70A6NJV1 201 aa9.79□□□□□ -0.84
SLC6A1-201ENST00000287766 TEX22C9J3V5 150 aa9.79□□□□□ -0.84
SLC6A1-201ENST00000287766 TMEM190Q8WZ59 177 aa9.79□□□□□ -0.84
SLC6A1-201ENST00000287766 UBL5Q9BZL1 73 aa9.79□□□□□ -0.84
SLC6A1-201ENST00000287766 OVOL3O00110 214 aa9.79□□□□□ -0.84
SLC6A1-201ENST00000287766 STHQ8IWL8 128 aa9.79□□□□□ -0.84
SLC6A1-201ENST00000287766 RHPN1-AS1Q9BWJ2 59 aa9.79□□□□□ -0.84
SLC6A1-201ENST00000287766 RNF114Q9Y508 228 aa9.79□□□□□ -0.84
SLC6A1-201ENST00000287766 HIVEP3Q5T1R4 2406 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms