RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 RRN3P1Q2M238 152 aa10.01□□□□□ -0.81
SLC28A1-201ENST00000286749 ATP6V0BQ99437 205 aa10.01□□□□□ -0.81
SLC28A1-201ENST00000286749 SPANXB1Q9NS25 103 aaPredicted RBP10.01□□□□□ -0.81
SLC28A1-201ENST00000286749 IGHV3-11P01762 117 aa10□□□□□ -0.81
SLC28A1-201ENST00000286749 BRD3OSQ6XYD6 125 aa10□□□□□ -0.81
SLC28A1-201ENST00000286749 MTURNQ8N3F0 131 aa10□□□□□ -0.81
SLC28A1-201ENST00000286749 CELSR1Q9NYQ6 3014 aa10□□□□□ -0.81
SLC28A1-201ENST00000286749 PRSS29PA6NIE9 313 aa10□□□□□ -0.81
SLC28A1-201ENST00000286749 NDUFA4O00483 81 aa10□□□□□ -0.81
SLC28A1-201ENST00000286749 LCNL1Q6ZST4 164 aa10□□□□□ -0.81
SLC28A1-201ENST00000286749 PRADC1Q9BSG0 188 aa10□□□□□ -0.81
SLC28A1-201ENST00000286749 LINC01619G3V211 115 aa9.99□□□□□ -0.81
SLC28A1-201ENST00000286749 A0A1B0GWB2 263 aa9.99□□□□□ -0.81
SLC28A1-201ENST00000286749 RNASE3P12724 160 aaKnown RBP9.99□□□□□ -0.81
SLC28A1-201ENST00000286749 SH2D6Q7Z4S9 175 aa9.99□□□□□ -0.81
SLC28A1-201ENST00000286749 FAM19A4Q96LR4 140 aa9.99□□□□□ -0.81
SLC28A1-201ENST00000286749 SPTAN1Q13813 2472 aaKnown RBP9.98□□□□□ -0.81
SLC28A1-201ENST00000286749 CRIP2P52943 208 aaPredicted RBP9.98□□□□□ -0.81
SLC28A1-201ENST00000286749 SCGB2A2Q13296 93 aa9.98□□□□□ -0.81
SLC28A1-201ENST00000286749 ETDBQ3ZM63 59 aa9.98□□□□□ -0.81
SLC28A1-201ENST00000286749 DEFB104AQ8WTQ1 72 aa9.98□□□□□ -0.81
SLC28A1-201ENST00000286749 ZNF815PA8K554 130 aa9.98□□□□□ -0.81
SLC28A1-201ENST00000286749 MED14OSP0DP75 135 aa9.98□□□□□ -0.81
SLC28A1-201ENST00000286749 DUSP14O95147 198 aaKnown RBP9.97□□□□□ -0.81
SLC28A1-201ENST00000286749 LY6EQ16553 131 aa9.97□□□□□ -0.81
SLC28A1-201ENST00000286749 GAGE13Q4V321 117 aa9.97□□□□□ -0.81
SLC28A1-201ENST00000286749 MORN3Q6PF18 240 aaPredicted RBP9.97□□□□□ -0.81
SLC28A1-201ENST00000286749 TSSC4Q9Y5U2 329 aaPredicted RBP9.97□□□□□ -0.81
SLC28A1-201ENST00000286749 IGHV1-69DA0A0B4J2H0 117 aa9.97□□□□□ -0.81
SLC28A1-201ENST00000286749 IGHV1-69P01742 117 aa9.97□□□□□ -0.81
SLC28A1-201ENST00000286749 SAMD13Q5VXD3 122 aa9.97□□□□□ -0.81
SLC28A1-201ENST00000286749 PLEKHB2Q96CS7 222 aa9.97□□□□□ -0.81
SLC28A1-201ENST00000286749 GTSF1LQ9H1H1 148 aa9.97□□□□□ -0.81
SLC28A1-201ENST00000286749 HOXA3O43365 443 aaPredicted RBP9.96□□□□□ -0.81
SLC28A1-201ENST00000286749 UCNP55089 124 aa9.96□□□□□ -0.81
SLC28A1-201ENST00000286749 SCGB1D4Q6XE38 83 aa9.96□□□□□ -0.81
SLC28A1-201ENST00000286749 SRD5A1P18405 259 aa9.96□□□□□ -0.82
SLC28A1-201ENST00000286749 EMP1P54849 157 aa9.96□□□□□ -0.82
SLC28A1-201ENST00000286749 APRG1Q8IVJ8 170 aa9.96□□□□□ -0.82
SLC28A1-201ENST00000286749 PGPEP1Q9NXJ5 209 aa9.96□□□□□ -0.82
SLC28A1-201ENST00000286749 PRO0461Q9UI25 63 aa9.96□□□□□ -0.82
SLC28A1-201ENST00000286749 CRYGDP07320 174 aa9.95□□□□□ -0.82
SLC28A1-201ENST00000286749 PF4V1P10720 104 aa9.95□□□□□ -0.82
SLC28A1-201ENST00000286749 AZU1P20160 251 aa9.95□□□□□ -0.82
SLC28A1-201ENST00000286749 CD300EQ496F6 205 aaPredicted RBP9.95□□□□□ -0.82
SLC28A1-201ENST00000286749 KLHL30-AS1Q8NEE0 82 aa9.95□□□□□ -0.82
SLC28A1-201ENST00000286749 RHPN1-AS1Q9BWJ2 59 aa9.95□□□□□ -0.82
SLC28A1-201ENST00000286749 JPT2Q9H910 190 aa9.95□□□□□ -0.82
SLC28A1-201ENST00000286749 PPP1R17O96001 155 aa9.95□□□□□ -0.82
SLC28A1-201ENST00000286749 COX6B1P14854 86 aa9.95□□□□□ -0.82
SLC28A1-201ENST00000286749 SPAG8Q99932 426 aaPredicted RBP9.95□□□□□ -0.82
SLC28A1-201ENST00000286749 MRPL16Q9NX20 251 aaKnown RBP9.95□□□□□ -0.82
SLC28A1-201ENST00000286749 TP53TG1Q9Y2A0 90 aa9.95□□□□□ -0.82
SLC28A1-201ENST00000286749 ACACBO00763 2458 aa9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 GAGE12HA6NDE8 117 aa9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 C11orf86A6NJI1 115 aa9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 TSHBP01222 138 aa9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 LINC00315P59091 139 aa9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 KIF25-AS1Q9Y6Z4 181 aa9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 J3QR89 54 aa9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 NXPH4O95158 308 aa9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 IGHV4-39P01824 125 aa9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 SRSF9Q13242 221 aaKnown RBP eCLIP9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 POM121L12Q8N7R1 296 aa9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 WFDC12Q8WWY7 111 aa9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 USMG5Q96IX5 58 aa9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 SIGMAR1Q99720 223 aa9.94□□□□□ -0.82
SLC28A1-201ENST00000286749 IGLV4-69A0A075B6H9 119 aa9.93□□□□□ -0.82
SLC28A1-201ENST00000286749 EDN2P20800 178 aa9.93□□□□□ -0.82
SLC28A1-201ENST00000286749 A0A087WWL8 130 aa9.93□□□□□ -0.82
SLC28A1-201ENST00000286749 LINC01549A6NIU2 74 aa9.93□□□□□ -0.82
SLC28A1-201ENST00000286749 IGHV4-38-2P0DP08 117 aa9.93□□□□□ -0.82
SLC28A1-201ENST00000286749 INSL3P51460 131 aa9.93□□□□□ -0.82
SLC28A1-201ENST00000286749 RPL39P62891 51 aaKnown RBP9.93□□□□□ -0.82
SLC28A1-201ENST00000286749 SMAGPQ0VAQ4 97 aa9.93□□□□□ -0.82
SLC28A1-201ENST00000286749 SUMO4Q6EEV6 95 aa9.93□□□□□ -0.82
SLC28A1-201ENST00000286749 ZFP2Q6ZN57 461 aa9.93□□□□□ -0.82
SLC28A1-201ENST00000286749 H3BUX3 64 aa9.92□□□□□ -0.82
SLC28A1-201ENST00000286749 C19orf84I3L1E1 186 aa9.92□□□□□ -0.82
SLC28A1-201ENST00000286749 IGHG2P01859 326 aa9.92□□□□□ -0.82
SLC28A1-201ENST00000286749 BLCAPP62952 87 aa9.92□□□□□ -0.82
SLC28A1-201ENST00000286749 SFTA2Q6UW10 78 aa9.92□□□□□ -0.82
SLC28A1-201ENST00000286749 Q6ZS46 218 aa9.92□□□□□ -0.82
SLC28A1-201ENST00000286749 TRBV7-9A0A0J9YWB2 115 aa9.92□□□□□ -0.82
SLC28A1-201ENST00000286749 TMEM238LA0A1B0GVL6 79 aa9.92□□□□□ -0.82
SLC28A1-201ENST00000286749 A6NJY4 79 aa9.92□□□□□ -0.82
SLC28A1-201ENST00000286749 FAM159AQ6UWV7 190 aa9.92□□□□□ -0.82
SLC28A1-201ENST00000286749 IGHV4OR15-8A0A075B7B6 117 aa9.91□□□□□ -0.82
SLC28A1-201ENST00000286749 A0A087WW49 117 aa9.91□□□□□ -0.82
SLC28A1-201ENST00000286749 IGIPA6NJ69 53 aa9.91□□□□□ -0.82
SLC28A1-201ENST00000286749 KLLNB2CW77 178 aa9.91□□□□□ -0.82
SLC28A1-201ENST00000286749 UBE2D1P51668 147 aa9.91□□□□□ -0.82
SLC28A1-201ENST00000286749 IGHV4-61A0A0C4DH41 118 aa9.91□□□□□ -0.82
SLC28A1-201ENST00000286749 F5H697 171 aa9.91□□□□□ -0.82
SLC28A1-201ENST00000286749 H3BUA1 57 aa9.91□□□□□ -0.82
SLC28A1-201ENST00000286749 POLR2KP53803 58 aaKnown RBP9.91□□□□□ -0.82
SLC28A1-201ENST00000286749 ITPR1Q14643 2758 aa9.91□□□□□ -0.82
SLC28A1-201ENST00000286749 PMVKQ15126 192 aa9.91□□□□□ -0.82
SLC28A1-201ENST00000286749 DAZ1Q9NQZ3 744 aaKnown RBP9.91□□□□□ -0.82
SLC28A1-201ENST00000286749 TRAV12-3A0A0B4J271 114 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms