RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 MRPL51Q4U2R6 128 aaKnown RBP3.21□□□□□ -1.9
SCN3A-201ENST00000283254 CYTL1Q9NRR1 136 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 IGHV4-59P01825 116 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 TCF15Q12870 199 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 ZFP2Q6ZN57 461 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 MRAPQ8TCY5 172 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 C10orf105Q8TEF2 133 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 SPATA25Q9BR10 227 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 DEFB112Q30KQ8 113 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 MORN5Q5VZ52 161 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 RNF183Q96D59 192 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 KMT2EQ8IZD2 1858 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 K7EMT4 169 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 C15orf53Q8NAA6 179 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 A0A087WV48 116 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 K7ERS5 55 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 TRACP01848 142 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 TNRC6AQ8NDV7 1962 aaKnown RBP3.2□□□□□ -1.9
SCN3A-201ENST00000283254 IGKV1-6A0A0C4DH72 117 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 A0A0J9YY99 117 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 JMJD7-PLA2G4BH0Y9G9 81 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 HIST2H2BCQ6DN03 193 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 C4orf3Q8WVX3 66 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 U3KQE9 123 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 IGLC7A0M8Q6 106 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 CXCL1P09341 107 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 Q6ZR03 302 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 MRPL35Q9NZE8 188 aaKnown RBP3.2□□□□□ -1.9
SCN3A-201ENST00000283254 K7EP34 96 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 SMIM27A0A1W2PRY6 76 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 NREPQ16612 68 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 Q8N1Y9 231 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 NPBQ8NG41 125 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 COX7B2Q8TF08 81 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 VOPP1Q96AW1 172 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 TIMM17AQ99595 171 aa3.2□□□□□ -1.9
SCN3A-201ENST00000283254 TRBV7-3A0A075B6L6 115 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 IGHV3-38A0A0C4DH36 116 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 C15orf65H3BRN8 121 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 CCL25O15444 150 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 C17orf58Q2M2W7 97 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 PYY3Q5JQD4 70 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 ZC2HC1AQ96GY0 325 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 SELENOKQ9Y6D0 94 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 FNDC1Q4ZHG4 1894 aaPredicted RBP3.19□□□□□ -1.9
SCN3A-201ENST00000283254 TRBV10-1A0A0K0K1A3 114 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 COX8AP10176 69 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 LRRC75A-AS1Q8N1F1 130 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 ETDBQ3ZM63 59 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 Q6ZRM9 215 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 GPHB5Q86YW7 130 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 NAA38Q9BRA0 125 aaKnown RBP3.19□□□□□ -1.9
SCN3A-201ENST00000283254 CENPVL3A0A0U1RRI6 287 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 C9orf118A6NHY6 69 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 CFC1BP0CG36 223 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 CFC1P0CG37 223 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 ATRAIDQ6UW56 229 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 Q6ZQT7 251 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 BAALCQ8WXS3 180 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 AGPAT4-IT1Q9H0P7 198 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 SND1-IT1Q9HBX3 110 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 VWA8A3KMH1 1905 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 SMIM9A6NGZ8 99 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 IGLC2P0DOY2 106 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 IGLC3P0DOY3 106 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 MED14OSP0DP75 135 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 DYNAPQ8N1N2 210 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 ZNRD1Q9P1U0 126 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 SRSF3P84103 164 aaKnown RBP3.19□□□□□ -1.9
SCN3A-201ENST00000283254 RBM3P98179 157 aaKnown RBP3.19□□□□□ -1.9
SCN3A-201ENST00000283254 SHISA2Q6UWI4 295 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 ANKRD29Q8N6D5 301 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 ZNF491Q8N8L2 437 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 TMEM263Q8WUH6 116 aaKnown RBP3.19□□□□□ -1.9
SCN3A-201ENST00000283254 COL4A1P02462 1669 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 NPYP01303 97 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 DEFB135Q30KP9 77 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 MAJINQ3KP22 176 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 FXYD5Q96DB9 178 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 GTSF1LQ9H1H1 148 aa3.19□□□□□ -1.9
SCN3A-201ENST00000283254 LY6G6EA0A0G2JKS1 128 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 PROP1O75360 226 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 CLPSL2Q6UWE3 100 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 C7orf33Q8WU49 177 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 SS18L2Q9UHA2 77 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 U3KQA8 63 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 TICRRQ7Z2Z1 1910 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 MYLKQ15746 1914 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 A0A096LPF7 62 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 IGHV4-61A0A0C4DH41 118 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 SPAG11BQ08648 103 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 C9orf47Q6ZRZ4 202 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 KLHDC3Q9BQ90 382 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 PRO0255Q9UI72 69 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 LINC00479Q96M42 142 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 RSPO3Q9BXY4 272 aaPredicted RBP3.18□□□□□ -1.9
SCN3A-201ENST00000283254 RS1O15537 224 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 V9GYV3 84 aa3.18□□□□□ -1.9
SCN3A-201ENST00000283254 NCOA6Q14686 2063 aaPredicted RBP3.18□□□□□ -1.9
SCN3A-201ENST00000283254 IGHG2P01859 326 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms