RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 PAM16Q9Y3D7 125 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 TRAV12-2A0A075B6T6 113 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 A0A096LNJ9 63 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 LINC01546A6NGU7 62 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 PRSS47A8MTI9 375 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 A8MTW9 85 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 NDUFA7O95182 113 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 DEFA6Q01524 100 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 SPINK13Q1W4C9 94 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 OR2K2Q8NGT1 345 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 ZNF747Q9BV97 191 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 MAP1LC3CQ9BXW4 147 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 H3BMM0 161 aa7.1□□□□□ -1.27
TRIM55-201ENST00000276573 NXPH4O95158 308 aa7.1□□□□□ -1.27
TRIM55-201ENST00000276573 CD7P09564 240 aa7.1□□□□□ -1.27
TRIM55-201ENST00000276573 CD300EQ496F6 205 aaPredicted RBP7.1□□□□□ -1.27
TRIM55-201ENST00000276573 DEFB125Q8N687 156 aa7.1□□□□□ -1.27
TRIM55-201ENST00000276573 NRACQ8N912 160 aa7.1□□□□□ -1.27
TRIM55-201ENST00000276573 MRAP2Q96G30 205 aa7.1□□□□□ -1.27
TRIM55-201ENST00000276573 JMJD8Q96S16 334 aa7.1□□□□□ -1.27
TRIM55-201ENST00000276573 NXT2Q9NPJ8 142 aaKnown RBP7.1□□□□□ -1.27
TRIM55-201ENST00000276573 TRAV25A0A0B4J276 109 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 HLA-DRB4P13762 266 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 PET117Q6UWS5 81 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 C14orf178Q8N769 122 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-201ENST00000276573 Q8N8P6 123 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 C14orf144Q96I85 54 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 NDUFAF3Q9BU61 184 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 DPH3P1Q9H4G8 78 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 HLA-DRB4X5D2U9 266 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 ACANP16112 2415 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 IGLV2-18A0A075B6J9 118 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 IGHV1OR15-1A0A075B7D0 117 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 TRAV26-2A0A0B4J265 109 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 IGHV3-16A0A0C4DH30 117 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 OR4C46A6NHA9 309 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 SPATA45Q537H7 98 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 ATOH7Q8N100 152 aa7.09□□□□□ -1.27
TRIM55-201ENST00000276573 SPAG8Q99932 426 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-201ENST00000276573 ZNF256Q9Y2P7 627 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-201ENST00000276573 HBDP02042 147 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 PROK1P58294 105 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 FXYD7P58549 80 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 CTAG1AP78358 180 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 ZNF124Q15973 351 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 POM121L12Q8N7R1 296 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 C9orf85Q96MD7 179 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 MIEN1Q9BRT3 115 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 MAP6D1Q9H9H5 199 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 MDFICQ9P1T7 246 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 KIF25-AS1Q9Y6Z4 181 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 TRAV9-2A0A087WT02 112 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 C20orf202A1L168 122 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 FCER1GP30273 86 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 Q8N1Y9 231 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 AP1S3Q96PC3 154 aa7.08□□□□□ -1.28
TRIM55-201ENST00000276573 MYO9AB2RTY4 2548 aa7.07□□□□□ -1.28
TRIM55-201ENST00000276573 RBMY1BA6NDE4 496 aaKnown RBP7.07□□□□□ -1.28
TRIM55-201ENST00000276573 RBMY1EA6NEQ0 496 aaKnown RBP7.07□□□□□ -1.28
TRIM55-201ENST00000276573 ADARB2-AS1A8MUL3 147 aa7.07□□□□□ -1.28
TRIM55-201ENST00000276573 RBMY1DP0C7P1 496 aaKnown RBP7.07□□□□□ -1.28
TRIM55-201ENST00000276573 LINC00315P59091 139 aa7.07□□□□□ -1.28
TRIM55-201ENST00000276573 MAJINQ3KP22 176 aa7.07□□□□□ -1.28
TRIM55-201ENST00000276573 LINC01545Q5VT33 79 aa7.07□□□□□ -1.28
TRIM55-201ENST00000276573 ZNF705AQ6ZN79 300 aaPredicted RBP7.07□□□□□ -1.28
TRIM55-201ENST00000276573 RASL10AQ92737 203 aa7.07□□□□□ -1.28
TRIM55-201ENST00000276573 AGRNO00468 2067 aa7.07□□□□□ -1.28
TRIM55-201ENST00000276573 AKAP9Q99996 3911 aa7.06□□□□□ -1.28
TRIM55-201ENST00000276573 MGPP08493 103 aa7.06□□□□□ -1.28
TRIM55-201ENST00000276573 RBMY1A1P0DJD3 496 aaKnown RBP7.06□□□□□ -1.28
TRIM55-201ENST00000276573 RBMY1CP0DJD4 496 aa7.06□□□□□ -1.28
TRIM55-201ENST00000276573 RBMY1FQ15415 496 aaKnown RBP7.06□□□□□ -1.28
TRIM55-201ENST00000276573 MCRIP2Q9BUT9 160 aaKnown RBP7.06□□□□□ -1.28
TRIM55-201ENST00000276573 JPT2Q9H910 190 aa7.06□□□□□ -1.28
TRIM55-201ENST00000276573 MUC4Q99102 2169 aa7.06□□□□□ -1.28
TRIM55-201ENST00000276573 SMIM17P0DL12 118 aa7.06□□□□□ -1.28
TRIM55-201ENST00000276573 CLUHP3Q96NS8 147 aa7.06□□□□□ -1.28
TRIM55-201ENST00000276573 C20orf78Q9BR46 151 aa7.06□□□□□ -1.28
TRIM55-201ENST00000276573 SORL1Q92673 2214 aa7.05□□□□□ -1.28
TRIM55-201ENST00000276573 TRGV11A0A075B6L2 103 aa7.05□□□□□ -1.28
TRIM55-201ENST00000276573 H0Y8G0 127 aa7.05□□□□□ -1.28
TRIM55-201ENST00000276573 IGLC3P0DOY3 106 aa7.05□□□□□ -1.28
TRIM55-201ENST00000276573 IGLL1P15814 213 aa7.05□□□□□ -1.28
TRIM55-201ENST00000276573 NSUN5P1Q3KNT7 163 aa7.05□□□□□ -1.28
TRIM55-201ENST00000276573 SYT8Q8NBV8 401 aa7.05□□□□□ -1.28
TRIM55-201ENST00000276573 IFI27L1Q96BM0 104 aa7.05□□□□□ -1.28
TRIM55-201ENST00000276573 INAFM1C9JVW0 142 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 PPP1R17O96001 155 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 KRTAP10-3P60369 221 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 LAGE3Q14657 143 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 ODF3L2Q3SX64 289 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 TMEM158Q8WZ71 300 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 RPL39LQ96EH5 51 aaKnown RBP7.04□□□□□ -1.28
TRIM55-201ENST00000276573 SMIM2Q9BVW6 85 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 NF1P21359 2839 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 HECTD1Q9ULT8 2610 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 CBY3A6NI87 242 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 TCAPO15273 167 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 FOSL1P15407 271 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 SUMO2P61956 95 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms