RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 C10orf105Q8TEF2 133 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 ATP6V0E2Q8NHE4 81 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 C20orf78Q9BR46 151 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 GPR179Q6PRD1 2367 aa9.24□□□□□ -0.93
SHPRH-201ENST00000275233 IGLC2P0DOY2 106 aa9.24□□□□□ -0.93
SHPRH-201ENST00000275233 IGLC3P0DOY3 106 aa9.24□□□□□ -0.93
SHPRH-201ENST00000275233 PRR20EP86478 221 aa9.24□□□□□ -0.93
SHPRH-201ENST00000275233 PRR20CP86479 221 aa9.24□□□□□ -0.93
SHPRH-201ENST00000275233 PRR20DP86480 221 aa9.24□□□□□ -0.93
SHPRH-201ENST00000275233 PRR20BP86481 221 aa9.24□□□□□ -0.93
SHPRH-201ENST00000275233 PRR20AP86496 221 aa9.24□□□□□ -0.93
SHPRH-201ENST00000275233 H3BMG7 143 aa9.24□□□□□ -0.93
SHPRH-201ENST00000275233 C5orf56Q8N8D9 126 aa9.24□□□□□ -0.93
SHPRH-201ENST00000275233 ETDCA0A1B0GVM5 59 aa9.24□□□□□ -0.93
SHPRH-201ENST00000275233 BVES-AS1Q5T3Y7 98 aa9.24□□□□□ -0.93
SHPRH-201ENST00000275233 SLC25A29Q8N8R3 303 aa9.24□□□□□ -0.93
SHPRH-201ENST00000275233 NOTCH3Q9UM47 2321 aa9.23□□□□□ -0.93
SHPRH-201ENST00000275233 TRBV20-1A0A075B6N2 111 aa9.23□□□□□ -0.93
SHPRH-201ENST00000275233 C15orf53Q8NAA6 179 aa9.23□□□□□ -0.93
SHPRH-201ENST00000275233 NCR3O14931 201 aa9.23□□□□□ -0.93
SHPRH-201ENST00000275233 ETDBQ3ZM63 59 aa9.23□□□□□ -0.93
SHPRH-201ENST00000275233 I3L2K1 104 aa9.23□□□□□ -0.93
SHPRH-201ENST00000275233 WISP2O76076 250 aa9.23□□□□□ -0.93
SHPRH-201ENST00000275233 K7EMI3 77 aa9.22□□□□□ -0.93
SHPRH-201ENST00000275233 ATP5G1P05496 136 aa9.22□□□□□ -0.93
SHPRH-201ENST00000275233 MRPL23Q16540 153 aaKnown RBP9.22□□□□□ -0.93
SHPRH-201ENST00000275233 WFDC11Q8NEX6 87 aa9.22□□□□□ -0.93
SHPRH-201ENST00000275233 Q8N9W7 124 aa9.22□□□□□ -0.93
SHPRH-201ENST00000275233 MSRB1Q9NZV6 116 aa9.22□□□□□ -0.93
SHPRH-201ENST00000275233 K7EIM0 57 aa9.22□□□□□ -0.93
SHPRH-201ENST00000275233 SRSF2Q01130 221 aaKnown RBP9.22□□□□□ -0.93
SHPRH-201ENST00000275233 TEX48A0A1B0GUV7 120 aa9.22□□□□□ -0.93
SHPRH-201ENST00000275233 IGFL2Q6UWQ7 119 aa9.21□□□□□ -0.93
SHPRH-201ENST00000275233 TRACP01848 142 aa9.21□□□□□ -0.93
SHPRH-201ENST00000275233 DAND5Q8N907 189 aa9.21□□□□□ -0.93
SHPRH-201ENST00000275233 HHLA3Q9XRX5 114 aa9.21□□□□□ -0.93
SHPRH-201ENST00000275233 C2orf70A6NJV1 201 aa9.21□□□□□ -0.94
SHPRH-201ENST00000275233 IGLL5B9A064 214 aa9.21□□□□□ -0.94
SHPRH-201ENST00000275233 PRAC2D3DTV9 90 aa9.21□□□□□ -0.94
SHPRH-201ENST00000275233 SPTAN1Q13813 2472 aaKnown RBP9.21□□□□□ -0.94
SHPRH-201ENST00000275233 COX7A2LO14548 114 aa9.21□□□□□ -0.94
SHPRH-201ENST00000275233 A0A1W2PNU3 283 aaPredicted RBP9.21□□□□□ -0.94
SHPRH-201ENST00000275233 POU2AF1Q16633 256 aa9.21□□□□□ -0.94
SHPRH-201ENST00000275233 PCP2Q8IVA1 136 aa9.21□□□□□ -0.94
SHPRH-201ENST00000275233 C8orf31Q8N9H6 132 aa9.21□□□□□ -0.94
SHPRH-201ENST00000275233 CHD3Q12873 2000 aaKnown RBP9.2□□□□□ -0.94
SHPRH-201ENST00000275233 IGLV11-55A0A075B6I3 123 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 RBAKDNA6NC62 111 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 HIST2H2BCQ6DN03 193 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 ZNF493Q6ZR52 646 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 Q8N1Y9 231 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 CLPSL1A2RUU4 121 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 A0A1W2PPM0 123 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 CTSGP08311 255 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 C16orf54Q6UWD8 224 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 PPDPFLQ8WWR9 84 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 TRBV12-3P01733 135 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 MED13Q9UHV7 2174 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 BAALC-AS2P0C853 105 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 COX7B2Q8TF08 81 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 C20orf144Q9BQM9 153 aa9.2□□□□□ -0.94
SHPRH-201ENST00000275233 C12orf74Q32Q52 190 aa9.19□□□□□ -0.94
SHPRH-201ENST00000275233 UTF1Q5T230 341 aa9.19□□□□□ -0.94
SHPRH-201ENST00000275233 CRYBA4P53673 196 aa9.19□□□□□ -0.94
SHPRH-201ENST00000275233 SEM1Q6ZVN7 128 aa9.19□□□□□ -0.94
SHPRH-201ENST00000275233 C11orf52Q96A22 123 aa9.19□□□□□ -0.94
SHPRH-201ENST00000275233 RPL39P62891 51 aaKnown RBP9.19□□□□□ -0.94
SHPRH-201ENST00000275233 ORMDL1Q9P0S3 153 aa9.19□□□□□ -0.94
SHPRH-201ENST00000275233 HIST2H2BDQ6DRA6 164 aa9.18□□□□□ -0.94
SHPRH-201ENST00000275233 UBE2AP49459 152 aa9.18□□□□□ -0.94
SHPRH-201ENST00000275233 K7EP34 96 aa9.18□□□□□ -0.94
SHPRH-201ENST00000275233 MALRD1Q5VYJ5 2156 aa9.18□□□□□ -0.94
SHPRH-201ENST00000275233 Q8N7P7 452 aa9.18□□□□□ -0.94
SHPRH-201ENST00000275233 NTN5Q8WTR8 489 aaPredicted RBP9.18□□□□□ -0.94
SHPRH-201ENST00000275233 F8W1H4 67 aa9.17□□□□□ -0.94
SHPRH-201ENST00000275233 NPSP0C0P6 89 aa9.17□□□□□ -0.94
SHPRH-201ENST00000275233 DEFB125Q8N687 156 aa9.17□□□□□ -0.94
SHPRH-201ENST00000275233 DAZ2Q13117 558 aaKnown RBP9.17□□□□□ -0.94
SHPRH-201ENST00000275233 PATE2Q6UY27 113 aa9.17□□□□□ -0.94
SHPRH-201ENST00000275233 DAZ4Q86SG3 579 aaKnown RBP9.17□□□□□ -0.94
SHPRH-201ENST00000275233 DAZ3Q9NR90 486 aaKnown RBP9.17□□□□□ -0.94
SHPRH-201ENST00000275233 A0A0J9YXV3 536 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 Q6ZVH6 145 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 PLCE1Q9P212 2302 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 E7EUB6 86 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 ZFP2Q6ZN57 461 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 LINC00173Q6ZV60 143 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 C4orf3Q8WVX3 66 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 ZNF747Q9BV97 191 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 KLK12Q9UKR0 248 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 K7EP13 123 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 IGKV1-17P01599 117 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 DENND4AQ7Z401 1863 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 ANKRD29Q8N6D5 301 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 SHANK1Q9Y566 2161 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 IFITM1P13164 125 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 SPANXA1Q9NS26 97 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 PLXNB3Q9ULL4 1909 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 DNAJC9-AS1A6NH13 148 aa9.16□□□□□ -0.94
SHPRH-201ENST00000275233 SND1-IT1Q9HBX3 110 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms