RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 LOXP28300 417 aaPredicted RBP9.88□□□□□ -0.83
HERC6-202ENST00000273960 USP9YO00507 2555 aaPredicted RBP9.88□□□□□ -0.83
HERC6-202ENST00000273960 POLQO75417 2590 aa9.87□□□□□ -0.83
HERC6-202ENST00000273960 IGF1P05019 195 aa9.87□□□□□ -0.83
HERC6-202ENST00000273960 NDUFA11Q86Y39 141 aa9.87□□□□□ -0.83
HERC6-202ENST00000273960 PKD1L2Q7Z442 2459 aa9.87□□□□□ -0.83
HERC6-202ENST00000273960 ADARB2-AS1A8MUL3 147 aa9.87□□□□□ -0.83
HERC6-202ENST00000273960 DLX6P56179 175 aa9.87□□□□□ -0.83
HERC6-202ENST00000273960 MEIG1Q5JSS6 88 aa9.87□□□□□ -0.83
HERC6-202ENST00000273960 C2orf66Q6UXQ4 117 aa9.87□□□□□ -0.83
HERC6-202ENST00000273960 ZNF575Q86XF7 245 aa9.87□□□□□ -0.83
HERC6-202ENST00000273960 MRPS12O15235 138 aaKnown RBP9.86□□□□□ -0.83
HERC6-202ENST00000273960 TEX36Q5VZQ5 186 aa9.86□□□□□ -0.83
HERC6-202ENST00000273960 RASL10AQ92737 203 aa9.86□□□□□ -0.83
HERC6-202ENST00000273960 SHISA9B4DS77 424 aa9.86□□□□□ -0.83
HERC6-202ENST00000273960 DUSP14O95147 198 aaKnown RBP9.86□□□□□ -0.83
HERC6-202ENST00000273960 IFITM1P13164 125 aa9.86□□□□□ -0.83
HERC6-202ENST00000273960 C15orf53Q8NAA6 179 aa9.86□□□□□ -0.83
HERC6-202ENST00000273960 IGLV2-18A0A075B6J9 118 aa9.86□□□□□ -0.83
HERC6-202ENST00000273960 CFC1BP0CG36 223 aa9.86□□□□□ -0.83
HERC6-202ENST00000273960 CFC1P0CG37 223 aa9.86□□□□□ -0.83
HERC6-202ENST00000273960 NDPQ00604 133 aa9.86□□□□□ -0.83
HERC6-202ENST00000273960 LYPD1Q8N2G4 141 aa9.86□□□□□ -0.83
HERC6-202ENST00000273960 NRACQ8N912 160 aa9.86□□□□□ -0.83
HERC6-202ENST00000273960 PIFOQ8TCI5 191 aa9.86□□□□□ -0.83
HERC6-202ENST00000273960 SMAD5-AS1Q9Y6J3 95 aa9.86□□□□□ -0.83
HERC6-202ENST00000273960 NACAE9PAV3 2078 aa9.85□□□□□ -0.83
HERC6-202ENST00000273960 IGLV3-9A0A075B6K5 115 aa9.85□□□□□ -0.83
HERC6-202ENST00000273960 THBDP07204 575 aa9.85□□□□□ -0.83
HERC6-202ENST00000273960 ID1P41134 155 aa9.85□□□□□ -0.83
HERC6-202ENST00000273960 MFAP4P55083 255 aa9.85□□□□□ -0.83
HERC6-202ENST00000273960 PVRIGQ6DKI7 326 aa9.85□□□□□ -0.83
HERC6-202ENST00000273960 RNASE6Q93091 150 aaKnown RBP9.85□□□□□ -0.83
HERC6-202ENST00000273960 CHCHD5Q9BSY4 110 aa9.85□□□□□ -0.83
HERC6-202ENST00000273960 TLN2Q9Y4G6 2542 aa9.85□□□□□ -0.83
HERC6-202ENST00000273960 C11orf86A6NJI1 115 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 PRSS2P07478 247 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 ELANEP08246 267 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 GATA4P43694 442 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 RPL39P62891 51 aaKnown RBP9.84□□□□□ -0.83
HERC6-202ENST00000273960 BAALCQ8WXS3 180 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 C21orf62Q9NYP8 219 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 E7EQL1 145 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 SMIM2Q9BVW6 85 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 AGPAT4-IT1Q9H0P7 198 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 TMEM178BH3BS89 294 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 K7ENP7 123 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 IGHG4P01861 327 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 LINC00574Q9H8X3 128 aa9.84□□□□□ -0.83
HERC6-202ENST00000273960 LRRK2Q5S007 2527 aa9.83□□□□□ -0.84
HERC6-202ENST00000273960 TRBV6-1A0A0K0K1D8 114 aa9.83□□□□□ -0.84
HERC6-202ENST00000273960 OPRPNQ99935 248 aaPredicted RBP9.83□□□□□ -0.84
HERC6-202ENST00000273960 F5H697 171 aa9.83□□□□□ -0.84
HERC6-202ENST00000273960 A4D1N5 150 aa9.83□□□□□ -0.84
HERC6-202ENST00000273960 BUB1B-PAK6H3BSN5 160 aa9.83□□□□□ -0.84
HERC6-202ENST00000273960 BRI3O95415 125 aa9.83□□□□□ -0.84
HERC6-202ENST00000273960 ZNF56Q15929 161 aa9.83□□□□□ -0.84
HERC6-202ENST00000273960 Q8N1Y9 231 aa9.83□□□□□ -0.84
HERC6-202ENST00000273960 EPG5Q9HCE0 2579 aa9.82□□□□□ -0.84
HERC6-202ENST00000273960 TSPEAR-AS2P59090 65 aa9.82□□□□□ -0.84
HERC6-202ENST00000273960 ECSCRQ19T08 205 aa9.82□□□□□ -0.84
HERC6-202ENST00000273960 LYRM7Q5U5X0 104 aa9.82□□□□□ -0.84
HERC6-202ENST00000273960 TRAV8-4A0A0B4J246 113 aa9.82□□□□□ -0.84
HERC6-202ENST00000273960 TMEM262E9PQX1 116 aa9.82□□□□□ -0.84
HERC6-202ENST00000273960 CD7P09564 240 aa9.82□□□□□ -0.84
HERC6-202ENST00000273960 UBE2D1P51668 147 aa9.82□□□□□ -0.84
HERC6-202ENST00000273960 SUMO2P61956 95 aaKnown RBP9.82□□□□□ -0.84
HERC6-202ENST00000273960 RPL11P62913 178 aaKnown RBP9.82□□□□□ -0.84
HERC6-202ENST00000273960 MRPL23Q16540 153 aaKnown RBP9.82□□□□□ -0.84
HERC6-202ENST00000273960 DUX3Q96PT4 197 aa9.82□□□□□ -0.84
HERC6-202ENST00000273960 PRO1854Q9UHT4 67 aa9.82□□□□□ -0.84
HERC6-202ENST00000273960 UBE2D3P61077 147 aa9.81□□□□□ -0.84
HERC6-202ENST00000273960 UBE2D2P62837 147 aa9.81□□□□□ -0.84
HERC6-202ENST00000273960 RHODO00212 210 aa9.81□□□□□ -0.84
HERC6-202ENST00000273960 PSMG4Q5JS54 123 aa9.81□□□□□ -0.84
HERC6-202ENST00000273960 PPDPFQ9H3Y8 114 aa9.81□□□□□ -0.84
HERC6-202ENST00000273960 PTPN13Q12923 2485 aa9.81□□□□□ -0.84
HERC6-202ENST00000273960 CCDC168Q8NDH2 2452 aa9.81□□□□□ -0.84
HERC6-202ENST00000273960 A0A0J9YY99 117 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 CRYGBP07316 175 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 HERVK_113P61574 105 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 IGF2-ASQ6U949 168 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 C10orf126Q8N4M7 172 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 NEXN-AS1Q8NBZ9 246 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 LINC00527Q9UJ94 153 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 PDE6HQ13956 83 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 Q6ZSV7 163 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 TP53TG1Q9Y2A0 90 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 ZNF256Q9Y2P7 627 aaPredicted RBP9.8□□□□□ -0.84
HERC6-202ENST00000273960 PHLDA3Q9Y5J5 127 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 TNFRSF13BO14836 293 aaPredicted RBP9.8□□□□□ -0.84
HERC6-202ENST00000273960 FAM74A4Q5TZK3 123 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 CITED1Q99966 193 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 JPT2Q9H910 190 aa9.8□□□□□ -0.84
HERC6-202ENST00000273960 FANCD2OSQ96PS1 177 aa9.79□□□□□ -0.84
HERC6-202ENST00000273960 LGALS3P17931 250 aaKnown RBP9.79□□□□□ -0.84
HERC6-202ENST00000273960 TMEM30BQ3MIR4 351 aa9.79□□□□□ -0.84
HERC6-202ENST00000273960 A0A087WWL8 130 aa9.79□□□□□ -0.84
HERC6-202ENST00000273960 CDSNQ15517 529 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms