RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 WT1-ASQ06250 92 aa6.32□□□□□ -1.4
LIMD1-201ENST00000273317 DEFB105AQ8NG35 78 aa6.32□□□□□ -1.4
LIMD1-201ENST00000273317 IGHV3-16A0A0C4DH30 117 aa6.32□□□□□ -1.4
LIMD1-201ENST00000273317 IGHV4-28A0A0C4DH34 117 aa6.32□□□□□ -1.4
LIMD1-201ENST00000273317 IGLC1P0CG04 106 aa6.32□□□□□ -1.4
LIMD1-201ENST00000273317 GNLYP22749 145 aa6.32□□□□□ -1.4
LIMD1-201ENST00000273317 BAALC-AS2P0C853 105 aa6.32□□□□□ -1.4
LIMD1-201ENST00000273317 LOXP28300 417 aaPredicted RBP6.32□□□□□ -1.4
LIMD1-201ENST00000273317 KAAG1Q9UBP8 84 aa6.32□□□□□ -1.4
LIMD1-201ENST00000273317 F6UB75 175 aa6.32□□□□□ -1.4
LIMD1-201ENST00000273317 ZNRF2Q8NHG8 242 aa6.32□□□□□ -1.4
LIMD1-201ENST00000273317 H3BMG7 143 aa6.32□□□□□ -1.4
LIMD1-201ENST00000273317 HIGD1BQ9P298 99 aa6.32□□□□□ -1.4
LIMD1-201ENST00000273317 COA6Q5JTJ3 125 aaKnown RBP6.31□□□□□ -1.4
LIMD1-201ENST00000273317 MP68P56378 58 aa6.31□□□□□ -1.4
LIMD1-201ENST00000273317 FOXE3Q13461 319 aa6.31□□□□□ -1.4
LIMD1-201ENST00000273317 RUSC1-AS1Q66K80 236 aa6.31□□□□□ -1.4
LIMD1-201ENST00000273317 WIPF3A6NGB9 483 aa6.31□□□□□ -1.4
LIMD1-201ENST00000273317 DEFB121Q5J5C9 76 aa6.31□□□□□ -1.4
LIMD1-201ENST00000273317 IGKV1-39P01597 117 aa6.31□□□□□ -1.4
LIMD1-201ENST00000273317 IGKV1D-39P04432 117 aa6.31□□□□□ -1.4
LIMD1-201ENST00000273317 IGLV1-44P01699 117 aa6.31□□□□□ -1.4
LIMD1-201ENST00000273317 C2CD3Q4AC94 2353 aa6.31□□□□□ -1.4
LIMD1-201ENST00000273317 CLPSL2Q6UWE3 100 aa6.31□□□□□ -1.4
LIMD1-201ENST00000273317 ATP6V0E2Q8NHE4 81 aa6.31□□□□□ -1.4
LIMD1-201ENST00000273317 ICOSQ9Y6W8 199 aa6.31□□□□□ -1.4
LIMD1-201ENST00000273317 HOXB4P17483 251 aaPredicted RBP6.31□□□□□ -1.4
LIMD1-201ENST00000273317 DEFB125Q8N687 156 aa6.31□□□□□ -1.4
LIMD1-201ENST00000273317 KNCNA6PVL3 124 aa6.3□□□□□ -1.4
LIMD1-201ENST00000273317 K7EN84 100 aa6.3□□□□□ -1.4
LIMD1-201ENST00000273317 DAZ2Q13117 558 aaKnown RBP6.3□□□□□ -1.4
LIMD1-201ENST00000273317 DAZ4Q86SG3 579 aaKnown RBP6.3□□□□□ -1.4
LIMD1-201ENST00000273317 DAZ3Q9NR90 486 aaKnown RBP6.3□□□□□ -1.4
LIMD1-201ENST00000273317 ZNF747Q9BV97 191 aa6.3□□□□□ -1.4
LIMD1-201ENST00000273317 C16orf74Q96GX8 76 aa6.3□□□□□ -1.4
LIMD1-201ENST00000273317 IGLC7A0M8Q6 106 aa6.3□□□□□ -1.4
LIMD1-201ENST00000273317 LINC00205P59089 165 aa6.3□□□□□ -1.4
LIMD1-201ENST00000273317 MRPL36Q9P0J6 103 aaKnown RBP6.3□□□□□ -1.4
LIMD1-201ENST00000273317 RNASE13Q5GAN3 156 aaKnown RBP6.3□□□□□ -1.4
LIMD1-201ENST00000273317 Q9H8V8 135 aa6.3□□□□□ -1.4
LIMD1-201ENST00000273317 KLF2Q9Y5W3 355 aaPredicted RBP6.3□□□□□ -1.4
LIMD1-201ENST00000273317 MLANAQ16655 118 aa6.3□□□□□ -1.4
LIMD1-201ENST00000273317 ANGP03950 147 aaKnown RBP6.3□□□□□ -1.4
LIMD1-201ENST00000273317 IGKV3D-7A0A0C4DH55 119 aa6.3□□□□□ -1.4
LIMD1-201ENST00000273317 A0A0B4J2C4 111 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 ATP5G1P05496 136 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 PRR20EP86478 221 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 PRR20CP86479 221 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 PRR20DP86480 221 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 PRR20BP86481 221 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 PRR20AP86496 221 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 MUC6Q6W4X9 2439 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 LRRK2Q5S007 2527 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 IGLV3-1P01715 115 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 G3V318 75 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 CRYBA4P53673 196 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 WDR86Q86TI4 376 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 TEN1Q86WV5 123 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 C5orf24Q7Z6I8 188 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 WFDC9Q8NEX5 89 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 SPTBN4Q9H254 2564 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 DKK2Q9UBU2 259 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 NXPH4O95158 308 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 PDE6GP18545 87 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 CRYGCP07315 174 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 IGLV3-9A0A075B6K5 115 aa6.29□□□□□ -1.4
LIMD1-201ENST00000273317 IGLL5B9A064 214 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 K7EQD1 137 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 LYPD6Q86Y78 171 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 CR1LQ2VPA4 569 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 UNQ6494/PRO21346Q6UXR6 183 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 Q71RC1 249 aaPredicted RBP6.28□□□□□ -1.4
LIMD1-201ENST00000273317 VPREB3Q9UKI3 123 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 DYNAPQ8N1N2 210 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 MPLKIPQ8TAP9 179 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 ACANP16112 2415 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 Q8NFD4 153 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 NPBQ8NG41 125 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 U3KQE9 123 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 RNF223E7ERA6 249 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 ETDCA0A1B0GVM5 59 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 CXCL5P42830 114 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 IGHV3-38A0A0C4DH36 116 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 Q6ZR03 302 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 OPRPNQ99935 248 aaPredicted RBP6.28□□□□□ -1.4
LIMD1-201ENST00000273317 K7ENP7 123 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 CGB3P0DN86 165 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 IGF2BP2-AS1Q96M15 143 aa6.28□□□□□ -1.4
LIMD1-201ENST00000273317 NTN5Q8WTR8 489 aaPredicted RBP6.27□□□□□ -1.41
LIMD1-201ENST00000273317 CHKB-CPT1BH3BT56 60 aa6.27□□□□□ -1.41
LIMD1-201ENST00000273317 COX7B2Q8TF08 81 aa6.27□□□□□ -1.41
LIMD1-201ENST00000273317 MED14OSP0DP75 135 aa6.27□□□□□ -1.41
LIMD1-201ENST00000273317 GP9P14770 177 aa6.27□□□□□ -1.41
LIMD1-201ENST00000273317 LINC01620Q4KN68 170 aa6.27□□□□□ -1.41
LIMD1-201ENST00000273317 BRK1Q8WUW1 75 aa6.27□□□□□ -1.41
LIMD1-201ENST00000273317 MLST8Q9BVC4 326 aa6.27□□□□□ -1.41
LIMD1-201ENST00000273317 NDUFB1O75438 58 aa6.27□□□□□ -1.41
LIMD1-201ENST00000273317 XCL1P47992 114 aa6.27□□□□□ -1.41
LIMD1-201ENST00000273317 DUX4L9Q6RFH8 374 aaPredicted RBP6.27□□□□□ -1.41
LIMD1-201ENST00000273317 UBE2BP63146 152 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms