RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 NUDT11Q96G61 164 aa8.95□□□□□ -0.98
SS18-202ENST00000269138 ZNF479Q96JC4 524 aa8.95□□□□□ -0.98
SS18-202ENST00000269138 RNASE7Q9H1E1 156 aaKnown RBP8.95□□□□□ -0.98
SS18-202ENST00000269138 MUC4Q99102 2169 aa8.95□□□□□ -0.98
SS18-202ENST00000269138 OR2D3Q8NGH3 330 aa8.95□□□□□ -0.98
SS18-202ENST00000269138 SCRT2Q9NQ03 307 aa8.95□□□□□ -0.98
SS18-202ENST00000269138 BIN3Q9NQY0 253 aa8.95□□□□□ -0.98
SS18-202ENST00000269138 PLECQ15149 4684 aaKnown RBP8.94□□□□□ -0.98
SS18-202ENST00000269138 TRAV26-1A0A087WT03 109 aa8.94□□□□□ -0.98
SS18-202ENST00000269138 A0A0J9YY99 117 aa8.94□□□□□ -0.98
SS18-202ENST00000269138 P01737 135 aa8.94□□□□□ -0.98
SS18-202ENST00000269138 FHL2Q14192 279 aa8.94□□□□□ -0.98
SS18-202ENST00000269138 DMRTA1Q5VZB9 504 aa8.94□□□□□ -0.98
SS18-202ENST00000269138 OR4C5Q8NGB2 326 aa8.94□□□□□ -0.98
SS18-202ENST00000269138 PTH2Q96A98 100 aa8.94□□□□□ -0.98
SS18-202ENST00000269138 NDUFAF3Q9BU61 184 aa8.94□□□□□ -0.98
SS18-202ENST00000269138 SMDT1Q9H4I9 107 aa8.94□□□□□ -0.98
SS18-202ENST00000269138 LY96Q9Y6Y9 160 aa8.94□□□□□ -0.98
SS18-202ENST00000269138 TRAV4A0A0B4J268 109 aa8.93□□□□□ -0.98
SS18-202ENST00000269138 MUC21A0A0G2JKD1 596 aa8.93□□□□□ -0.98
SS18-202ENST00000269138 MUC21A0A140T8X8 626 aa8.93□□□□□ -0.98
SS18-202ENST00000269138 RS1O15537 224 aa8.93□□□□□ -0.98
SS18-202ENST00000269138 CXCL1P09341 107 aa8.93□□□□□ -0.98
SS18-202ENST00000269138 CFAP126Q5VTH2 177 aa8.93□□□□□ -0.98
SS18-202ENST00000269138 LINC01551Q86U37 167 aa8.93□□□□□ -0.98
SS18-202ENST00000269138 FAM210BQ96KR6 192 aa8.93□□□□□ -0.98
SS18-202ENST00000269138 JPT2Q9H910 190 aa8.93□□□□□ -0.98
SS18-202ENST00000269138 TCTAP57738 103 aa8.92□□□□□ -0.98
SS18-202ENST00000269138 TMEM241Q24JQ0 296 aa8.92□□□□□ -0.98
SS18-202ENST00000269138 OR10AG1Q8NH19 301 aa8.92□□□□□ -0.98
SS18-202ENST00000269138 VSIG2Q96IQ7 327 aa8.92□□□□□ -0.98
SS18-202ENST00000269138 PHLDA3Q9Y5J5 127 aa8.92□□□□□ -0.98
SS18-202ENST00000269138 IGHV3-73A0A0B4J1V6 119 aa8.91□□□□□ -0.98
SS18-202ENST00000269138 TRGV4A0A0C4DH28 118 aa8.91□□□□□ -0.98
SS18-202ENST00000269138 M0R381 172 aa8.91□□□□□ -0.98
SS18-202ENST00000269138 MED14OSP0DP75 135 aa8.91□□□□□ -0.98
SS18-202ENST00000269138 RPS20P60866 119 aaKnown RBP8.91□□□□□ -0.98
SS18-202ENST00000269138 SSTP61278 116 aa8.91□□□□□ -0.98
SS18-202ENST00000269138 FAM74A3Q4VXF1 159 aa8.91□□□□□ -0.98
SS18-202ENST00000269138 SOHLH1Q5JUK2 328 aa8.91□□□□□ -0.98
SS18-202ENST00000269138 SSBP4Q9BWG4 385 aaPredicted RBP8.91□□□□□ -0.98
SS18-202ENST00000269138 SAMD10Q9BYL1 202 aa8.91□□□□□ -0.98
SS18-202ENST00000269138 RPP21Q9H633 154 aaKnown RBP8.91□□□□□ -0.98
SS18-202ENST00000269138 LCE6AA0A183 80 aa8.9□□□□□ -0.98
SS18-202ENST00000269138 SNAI2O43623 268 aa8.9□□□□□ -0.98
SS18-202ENST00000269138 NUDT3O95989 172 aa8.9□□□□□ -0.98
SS18-202ENST00000269138 IGLC6P0CF74 106 aa8.9□□□□□ -0.98
SS18-202ENST00000269138 RPL23P62829 140 aaKnown RBP8.9□□□□□ -0.98
SS18-202ENST00000269138 TPPP3Q9BW30 176 aa8.9□□□□□ -0.98
SS18-202ENST00000269138 HHLA3Q9XRX5 114 aa8.9□□□□□ -0.98
SS18-202ENST00000269138 GATCO43716 136 aaKnown RBP8.9□□□□□ -0.99
SS18-202ENST00000269138 OR5AL1P0C617 328 aa8.9□□□□□ -0.99
SS18-202ENST00000269138 CRYBA4P53673 196 aa8.9□□□□□ -0.99
SS18-202ENST00000269138 ERVFC1-1P60608 527 aa8.9□□□□□ -0.99
SS18-202ENST00000269138 PIK3CD-AS1Q5SR53 167 aa8.9□□□□□ -0.99
SS18-202ENST00000269138 FAM231DQ6ZW35 169 aa8.9□□□□□ -0.99
SS18-202ENST00000269138 ZFP82Q8N141 532 aa8.9□□□□□ -0.99
SS18-202ENST00000269138 FER1L6-AS1Q8NA97 138 aa8.9□□□□□ -0.99
SS18-202ENST00000269138 SYT8Q8NBV8 401 aa8.9□□□□□ -0.99
SS18-202ENST00000269138 LINC00476Q8WZB0 136 aa8.9□□□□□ -0.99
SS18-202ENST00000269138 NAT8Q9UHE5 227 aa8.9□□□□□ -0.99
SS18-202ENST00000269138 PRO0255Q9UI72 69 aa8.9□□□□□ -0.99
SS18-202ENST00000269138 A8MWV9 139 aa8.89□□□□□ -0.99
SS18-202ENST00000269138 PAX4O43316 350 aa8.89□□□□□ -0.99
SS18-202ENST00000269138 NXPH4O95158 308 aa8.89□□□□□ -0.99
SS18-202ENST00000269138 LY6G6CO95867 125 aa8.89□□□□□ -0.99
SS18-202ENST00000269138 ADIRFQ15847 76 aa8.89□□□□□ -0.99
SS18-202ENST00000269138 Q6ZSN1 163 aa8.89□□□□□ -0.99
SS18-202ENST00000269138 C15orf53Q8NAA6 179 aa8.89□□□□□ -0.99
SS18-202ENST00000269138 ISOC2Q96AB3 205 aa8.89□□□□□ -0.99
SS18-202ENST00000269138 ALMS1Q8TCU4 4167 aa8.88□□□□□ -0.99
SS18-202ENST00000269138 A0A087WWL8 130 aa8.88□□□□□ -0.99
SS18-202ENST00000269138 XKRY2A2RUG3 117 aa8.88□□□□□ -0.99
SS18-202ENST00000269138 GATA1P15976 413 aaPredicted RBP8.88□□□□□ -0.99
SS18-202ENST00000269138 UFSP1Q6NVU6 142 aa8.88□□□□□ -0.99
SS18-202ENST00000269138 LYZL1Q6UWQ5 148 aa8.88□□□□□ -0.99
SS18-202ENST00000269138 GTSF1Q8WW33 167 aa8.88□□□□□ -0.99
SS18-202ENST00000269138 SFRP2Q96HF1 295 aa8.88□□□□□ -0.99
SS18-202ENST00000269138 NACAE9PAV3 2078 aa8.88□□□□□ -0.99
SS18-202ENST00000269138 KMT2CQ8NEZ4 4911 aaKnown RBP8.88□□□□□ -0.99
SS18-202ENST00000269138 LOC100131303A0A0U1RQF7 123 aa8.87□□□□□ -0.99
SS18-202ENST00000269138 H3BNG1 76 aa8.87□□□□□ -0.99
SS18-202ENST00000269138 CRYGDP07320 174 aa8.87□□□□□ -0.99
SS18-202ENST00000269138 SLAQ13239 276 aa8.87□□□□□ -0.99
SS18-202ENST00000269138 SPANXN1Q5VSR9 72 aa8.87□□□□□ -0.99
SS18-202ENST00000269138 LGALS9CQ6DKI2 356 aa8.87□□□□□ -0.99
SS18-202ENST00000269138 COMMD7Q86VX2 200 aa8.87□□□□□ -0.99
SS18-202ENST00000269138 OSTCQ9NRP0 149 aa8.87□□□□□ -0.99
SS18-202ENST00000269138 MSRB1Q9NZV6 116 aa8.87□□□□□ -0.99
SS18-202ENST00000269138 LYSTQ99698 3801 aa8.87□□□□□ -0.99
SS18-202ENST00000269138 A0A096LPF7 62 aa8.86□□□□□ -0.99
SS18-202ENST00000269138 FAM74A4Q5TZK3 123 aa8.86□□□□□ -0.99
SS18-202ENST00000269138 SLC25A29Q8N8R3 303 aa8.86□□□□□ -0.99
SS18-202ENST00000269138 DNAH1Q9P2D7 4330 aa8.86□□□□□ -0.99
SS18-202ENST00000269138 A0A1W2PPQ1 181 aa8.85□□□□□ -0.99
SS18-202ENST00000269138 LINC00862A6NCI5 91 aa8.85□□□□□ -0.99
SS18-202ENST00000269138 A8MWL6 223 aa8.85□□□□□ -0.99
SS18-202ENST00000269138 GYPEP15421 78 aa8.85□□□□□ -0.99
SS18-202ENST00000269138 ZFP2Q6ZN57 461 aa8.85□□□□□ -0.99
SS18-202ENST00000269138 V9GYV3 84 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms