RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 PLNP26678 52 aa16.71■□□□□ 0.27
CDR2-201ENST00000268383 C2orf66Q6UXQ4 117 aa16.71■□□□□ 0.27
CDR2-201ENST00000268383 FAM223AQ8IWN6 122 aa16.71■□□□□ 0.27
CDR2-201ENST00000268383 LINC00477Q96M19 166 aa16.71■□□□□ 0.27
CDR2-201ENST00000268383 DPH3P1Q9H4G8 78 aa16.71■□□□□ 0.27
CDR2-201ENST00000268383 FLNCQ14315 2725 aa16.71■□□□□ 0.27
CDR2-201ENST00000268383 RNASE3P12724 160 aaKnown RBP16.7■□□□□ 0.26
CDR2-201ENST00000268383 WFDC2Q14508 124 aa16.7■□□□□ 0.26
CDR2-201ENST00000268383 H3BMG7 143 aa16.7■□□□□ 0.26
CDR2-201ENST00000268383 TOMM6Q96B49 74 aa16.7■□□□□ 0.26
CDR2-201ENST00000268383 CREBBPQ92793 2442 aa16.7■□□□□ 0.26
CDR2-201ENST00000268383 IGHV1-69DA0A0B4J2H0 117 aa16.69■□□□□ 0.26
CDR2-201ENST00000268383 IGHV4-61A0A0C4DH41 118 aa16.69■□□□□ 0.26
CDR2-201ENST00000268383 IGHV1-69P01742 117 aa16.69■□□□□ 0.26
CDR2-201ENST00000268383 NEXN-AS1Q8NBZ9 246 aa16.69■□□□□ 0.26
CDR2-201ENST00000268383 BAALCQ8WXS3 180 aa16.69■□□□□ 0.26
CDR2-201ENST00000268383 ZNF479Q96JC4 524 aa16.69■□□□□ 0.26
CDR2-201ENST00000268383 ZANQ9Y493 2812 aa16.69■□□□□ 0.26
CDR2-201ENST00000268383 TMEM238C9JI98 176 aa16.69■□□□□ 0.26
CDR2-201ENST00000268383 E9PLD3 99 aa16.69■□□□□ 0.26
CDR2-201ENST00000268383 H3BUX3 64 aa16.69■□□□□ 0.26
CDR2-201ENST00000268383 CUBNO60494 3623 aa16.68■□□□□ 0.26
CDR2-201ENST00000268383 OR11H12B2RN74 326 aa16.68■□□□□ 0.26
CDR2-201ENST00000268383 HLA-DRB4P13762 266 aa16.68■□□□□ 0.26
CDR2-201ENST00000268383 OR11H1Q8NG94 326 aa16.68■□□□□ 0.26
CDR2-201ENST00000268383 OR11H2Q8NH07 326 aa16.68■□□□□ 0.26
CDR2-201ENST00000268383 HLA-DRB4X5D2U9 266 aa16.68■□□□□ 0.26
CDR2-201ENST00000268383 PRSS29PA6NIE9 313 aa16.68■□□□□ 0.26
CDR2-201ENST00000268383 DUSP14O95147 198 aaKnown RBP16.68■□□□□ 0.26
CDR2-201ENST00000268383 ORMDL2Q53FV1 153 aa16.68■□□□□ 0.26
CDR2-201ENST00000268383 PSMG4Q5JS54 123 aa16.68■□□□□ 0.26
CDR2-201ENST00000268383 RHPN1-AS1Q9BWJ2 59 aa16.68■□□□□ 0.26
CDR2-201ENST00000268383 NDUFA4O00483 81 aa16.67■□□□□ 0.26
CDR2-201ENST00000268383 UCNP55089 124 aa16.67■□□□□ 0.26
CDR2-201ENST00000268383 TMEM95Q3KNT9 176 aa16.67■□□□□ 0.26
CDR2-201ENST00000268383 SFTA2Q6UW10 78 aa16.67■□□□□ 0.26
CDR2-201ENST00000268383 KLHL30-AS1Q8NEE0 82 aa16.67■□□□□ 0.26
CDR2-201ENST00000268383 CFAP46Q8IYW2 2715 aa16.66■□□□□ 0.26
CDR2-201ENST00000268383 TRBV7-3A0A075B6L6 115 aa16.66■□□□□ 0.26
CDR2-201ENST00000268383 MYMXA0A1B0GTQ4 84 aa16.66■□□□□ 0.26
CDR2-201ENST00000268383 OVOL1O14753 267 aa16.66■□□□□ 0.26
CDR2-201ENST00000268383 SH2D6Q7Z4S9 175 aa16.66■□□□□ 0.26
CDR2-201ENST00000268383 LENEPQ9Y5L5 61 aa16.66■□□□□ 0.26
CDR2-201ENST00000268383 A0A087WWL8 130 aa16.66■□□□□ 0.26
CDR2-201ENST00000268383 PLEKHB2Q96CS7 222 aa16.66■□□□□ 0.26
CDR2-201ENST00000268383 USP9YO00507 2555 aaPredicted RBP16.65■□□□□ 0.26
CDR2-201ENST00000268383 TRAV12-1A0A0B4J245 112 aa16.65■□□□□ 0.26
CDR2-201ENST00000268383 PRADC1Q9BSG0 188 aa16.65■□□□□ 0.26
CDR2-201ENST00000268383 LGALS1P09382 135 aaKnown RBP16.65■□□□□ 0.26
CDR2-201ENST00000268383 FOXI2Q6ZQN5 318 aa16.65■□□□□ 0.26
CDR2-201ENST00000268383 CD300EQ496F6 205 aaPredicted RBP16.64■□□□□ 0.25
CDR2-201ENST00000268383 RPL39P62891 51 aaKnown RBP16.64■□□□□ 0.25
CDR2-201ENST00000268383 CENPEQ02224 2701 aa16.64■□□□□ 0.25
CDR2-201ENST00000268383 IGKV3-20P01619 116 aa16.63■□□□□ 0.25
CDR2-201ENST00000268383 C20orf78Q9BR46 151 aa16.63■□□□□ 0.25
CDR2-201ENST00000268383 FAM19A4Q96LR4 140 aa16.63■□□□□ 0.25
CDR2-201ENST00000268383 SLC25A16P16260 332 aa16.62■□□□□ 0.25
CDR2-201ENST00000268383 GNLYP22749 145 aa16.62■□□□□ 0.25
CDR2-201ENST00000268383 SCGB2A2Q13296 93 aa16.62■□□□□ 0.25
CDR2-201ENST00000268383 ETDBQ3ZM63 59 aa16.62■□□□□ 0.25
CDR2-201ENST00000268383 TSHBP01222 138 aa16.61■□□□□ 0.25
CDR2-201ENST00000268383 CRYGDP07320 174 aa16.61■□□□□ 0.25
CDR2-201ENST00000268383 POLQO75417 2590 aa16.61■□□□□ 0.25
CDR2-201ENST00000268383 TRAV12-3A0A0B4J271 114 aa16.61■□□□□ 0.25
CDR2-201ENST00000268383 ZNF815PA8K554 130 aa16.61■□□□□ 0.25
CDR2-201ENST00000268383 C10orf99Q6UWK7 81 aa16.61■□□□□ 0.25
CDR2-201ENST00000268383 LINC00315P59091 139 aa16.61■□□□□ 0.25
CDR2-201ENST00000268383 TP53TG1Q9Y2A0 90 aa16.6■□□□□ 0.25
CDR2-201ENST00000268383 F5H697 171 aa16.6■□□□□ 0.25
CDR2-201ENST00000268383 IGHG2P01859 326 aa16.6■□□□□ 0.25
CDR2-201ENST00000268383 CRIP2P52943 208 aaPredicted RBP16.6■□□□□ 0.25
CDR2-201ENST00000268383 FAM74A4Q5TZK3 123 aa16.6■□□□□ 0.25
CDR2-201ENST00000268383 GTSF1LQ9H1H1 148 aa16.6■□□□□ 0.25
CDR2-201ENST00000268383 USP9XQ93008 2570 aaPredicted RBP16.59■□□□□ 0.25
CDR2-201ENST00000268383 TAL2Q16559 108 aa16.59■□□□□ 0.25
CDR2-201ENST00000268383 RRN3P1Q2M238 152 aa16.59■□□□□ 0.25
CDR2-201ENST00000268383 SCGB1D4Q6XE38 83 aa16.59■□□□□ 0.25
CDR2-201ENST00000268383 PKD1L2Q7Z442 2459 aa16.59■□□□□ 0.25
CDR2-201ENST00000268383 TRAV12-2A0A075B6T6 113 aa16.59■□□□□ 0.25
CDR2-201ENST00000268383 C11orf86A6NJI1 115 aa16.59■□□□□ 0.25
CDR2-201ENST00000268383 KIF25-AS1Q9Y6Z4 181 aa16.59■□□□□ 0.25
CDR2-201ENST00000268383 CD7P09564 240 aa16.58■□□□□ 0.25
CDR2-201ENST00000268383 MORN3Q6PF18 240 aaPredicted RBP16.58■□□□□ 0.25
CDR2-201ENST00000268383 SPANXB1Q9NS25 103 aaPredicted RBP16.58■□□□□ 0.25
CDR2-201ENST00000268383 INSL3P51460 131 aa16.58■□□□□ 0.24
CDR2-201ENST00000268383 SUMO4Q6EEV6 95 aa16.58■□□□□ 0.24
CDR2-201ENST00000268383 AVPP01185 164 aa16.57■□□□□ 0.24
CDR2-201ENST00000268383 PGPEP1Q9NXJ5 209 aa16.57■□□□□ 0.24
CDR2-201ENST00000268383 FAM159AQ6UWV7 190 aa16.56■□□□□ 0.24
CDR2-201ENST00000268383 USMG5Q96IX5 58 aa16.56■□□□□ 0.24
CDR2-201ENST00000268383 DAZ1Q9NQZ3 744 aaKnown RBP16.56■□□□□ 0.24
CDR2-201ENST00000268383 IGHV4-30-2A0A087WSY4 118 aa16.56■□□□□ 0.24
CDR2-201ENST00000268383 A6NDX4 124 aa16.55■□□□□ 0.24
CDR2-201ENST00000268383 ZNF688P0C7X2 276 aa16.55■□□□□ 0.24
CDR2-201ENST00000268383 ATP6V0BQ99437 205 aa16.55■□□□□ 0.24
CDR2-201ENST00000268383 TSSC4Q9Y5U2 329 aaPredicted RBP16.55■□□□□ 0.24
CDR2-201ENST00000268383 IGLV4-69A0A075B6H9 119 aa16.55■□□□□ 0.24
CDR2-201ENST00000268383 HOXA3O43365 443 aaPredicted RBP16.55■□□□□ 0.24
CDR2-201ENST00000268383 SRSF9Q13242 221 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDR2-201ENST00000268383 ZFP2Q6ZN57 461 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms