RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 OR11H4Q8NGC9 324 aa9.49□□□□□ -0.89
COMMD4-201ENST00000267935 COX11Q9Y6N1 276 aa9.49□□□□□ -0.89
COMMD4-201ENST00000267935 HSD17B11Q8NBQ5 300 aa9.48□□□□□ -0.89
COMMD4-201ENST00000267935 PTH2Q96A98 100 aa9.48□□□□□ -0.89
COMMD4-201ENST00000267935 TRAV8-1A0A0A6YYK1 113 aa9.47□□□□□ -0.89
COMMD4-201ENST00000267935 IGHV3-73A0A0B4J1V6 119 aa9.47□□□□□ -0.89
COMMD4-201ENST00000267935 A0A0D9SG52 128 aa9.47□□□□□ -0.89
COMMD4-201ENST00000267935 SEC11BP0C7V7 166 aa9.47□□□□□ -0.89
COMMD4-201ENST00000267935 ZNF345Q14585 488 aa9.47□□□□□ -0.89
COMMD4-201ENST00000267935 ZFP69Q49AA0 526 aa9.47□□□□□ -0.89
COMMD4-201ENST00000267935 RPL7L1Q6DKI1 246 aaKnown RBP9.47□□□□□ -0.89
COMMD4-201ENST00000267935 DEFB104AQ8WTQ1 72 aa9.47□□□□□ -0.89
COMMD4-201ENST00000267935 TVP23CQ96ET8 276 aa9.47□□□□□ -0.89
COMMD4-201ENST00000267935 FAM30AQ9NZY2 134 aa9.47□□□□□ -0.89
COMMD4-201ENST00000267935 SRRM2Q9UQ35 2752 aaKnown RBP9.47□□□□□ -0.89
COMMD4-201ENST00000267935 A0A087WWC5 75 aa9.46□□□□□ -0.9
COMMD4-201ENST00000267935 KANTRA0A1W2PQU2 76 aa9.46□□□□□ -0.9
COMMD4-201ENST00000267935 GGTLC3B5MD39 225 aa9.46□□□□□ -0.9
COMMD4-201ENST00000267935 SMUG1Q53HV7 270 aa9.46□□□□□ -0.9
COMMD4-201ENST00000267935 KCNRGQ8N5I3 272 aa9.46□□□□□ -0.9
COMMD4-201ENST00000267935 OR10G9Q8NGN4 311 aa9.46□□□□□ -0.9
COMMD4-201ENST00000267935 OR10G7Q8NGN6 311 aa9.46□□□□□ -0.9
COMMD4-201ENST00000267935 RMI2Q96E14 147 aa9.46□□□□□ -0.9
COMMD4-201ENST00000267935 PFDN1O60925 122 aa9.45□□□□□ -0.9
COMMD4-201ENST00000267935 GCGP01275 180 aa9.45□□□□□ -0.9
COMMD4-201ENST00000267935 ATP6V0CP27449 155 aa9.45□□□□□ -0.9
COMMD4-201ENST00000267935 FGF8P55075 233 aaPredicted RBP9.45□□□□□ -0.9
COMMD4-201ENST00000267935 SAPCD1Q5SSQ6 148 aa9.45□□□□□ -0.9
COMMD4-201ENST00000267935 C5orf17Q8NAS9 161 aa9.45□□□□□ -0.9
COMMD4-201ENST00000267935 SGK494Q96LW2 274 aa9.45□□□□□ -0.9
COMMD4-201ENST00000267935 URGCP-MRPS24S4R325 110 aa9.45□□□□□ -0.9
COMMD4-201ENST00000267935 VPS13BQ7Z7G8 4022 aa9.45□□□□□ -0.9
COMMD4-201ENST00000267935 A8MWV9 139 aa9.44□□□□□ -0.9
COMMD4-201ENST00000267935 S100A4P26447 101 aaKnown RBP9.44□□□□□ -0.9
COMMD4-201ENST00000267935 GNG5P63218 68 aa9.44□□□□□ -0.9
COMMD4-201ENST00000267935 ZFP2Q6ZN57 461 aa9.44□□□□□ -0.9
COMMD4-201ENST00000267935 TMUB2Q71RG4 321 aa9.44□□□□□ -0.9
COMMD4-201ENST00000267935 C9orf85Q96MD7 179 aa9.44□□□□□ -0.9
COMMD4-201ENST00000267935 PSG8Q9UQ74 426 aa9.44□□□□□ -0.9
COMMD4-201ENST00000267935 PGPEP1LA6NFU8 196 aa9.43□□□□□ -0.9
COMMD4-201ENST00000267935 KRTAP29-1A8MX34 341 aaPredicted RBP9.43□□□□□ -0.9
COMMD4-201ENST00000267935 BCL2L11O43521 198 aa9.43□□□□□ -0.9
COMMD4-201ENST00000267935 EIF3GO75821 320 aaKnown RBP eCLIP9.43□□□□□ -0.9
COMMD4-201ENST00000267935 TCRAP04437 139 aa9.43□□□□□ -0.9
COMMD4-201ENST00000267935 LGALSLQ3ZCW2 172 aaPredicted RBP9.43□□□□□ -0.9
COMMD4-201ENST00000267935 ZNF506Q5JVG8 444 aa9.43□□□□□ -0.9
COMMD4-201ENST00000267935 PIK3CD-AS1Q5SR53 167 aa9.43□□□□□ -0.9
COMMD4-201ENST00000267935 DPPA3Q6W0C5 159 aa9.43□□□□□ -0.9
COMMD4-201ENST00000267935 LINC00528Q8N1L1 170 aa9.43□□□□□ -0.9
COMMD4-201ENST00000267935 Q8N976 141 aa9.43□□□□□ -0.9
COMMD4-201ENST00000267935 PSMG3Q9BT73 122 aaPredicted RBP9.43□□□□□ -0.9
COMMD4-201ENST00000267935 ZNF471Q9BX82 626 aaPredicted RBP9.43□□□□□ -0.9
COMMD4-201ENST00000267935 CYTL1Q9NRR1 136 aa9.43□□□□□ -0.9
COMMD4-201ENST00000267935 GAGE12JA6NER3 117 aa9.42□□□□□ -0.9
COMMD4-201ENST00000267935 RBFOX3A6NFN3 312 aa9.42□□□□□ -0.9
COMMD4-201ENST00000267935 HMGB3O15347 200 aaKnown RBP9.42□□□□□ -0.9
COMMD4-201ENST00000267935 MBP02144 154 aa9.42□□□□□ -0.9
COMMD4-201ENST00000267935 ARL14EPLP0DKL9 152 aa9.42□□□□□ -0.9
COMMD4-201ENST00000267935 CDC34P49427 236 aaPredicted RBP9.42□□□□□ -0.9
COMMD4-201ENST00000267935 RAB2AP61019 212 aa9.42□□□□□ -0.9
COMMD4-201ENST00000267935 FLI1Q01543 452 aaPredicted RBP9.42□□□□□ -0.9
COMMD4-201ENST00000267935 GAGE1Q13065 139 aa9.42□□□□□ -0.9
COMMD4-201ENST00000267935 GAGE4Q13068 117 aa9.42□□□□□ -0.9
COMMD4-201ENST00000267935 GAGE5Q13069 117 aa9.42□□□□□ -0.9
COMMD4-201ENST00000267935 GAGE13Q4V321 117 aa9.42□□□□□ -0.9
COMMD4-201ENST00000267935 KCNIP4Q6PIL6 250 aa9.42□□□□□ -0.9
COMMD4-201ENST00000267935 PRNTQ86SH4 94 aa9.42□□□□□ -0.9
COMMD4-201ENST00000267935 OR2G3Q8NGZ4 309 aa9.42□□□□□ -0.9
COMMD4-201ENST00000267935 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.41□□□□□ -0.9
COMMD4-201ENST00000267935 ZNF80P51504 273 aaPredicted RBP9.41□□□□□ -0.9
COMMD4-201ENST00000267935 SUMO1P63165 101 aaKnown RBP9.41□□□□□ -0.9
COMMD4-201ENST00000267935 EIF5AP63241 154 aaKnown RBP9.41□□□□□ -0.9
COMMD4-201ENST00000267935 SERF2P84101 59 aa9.41□□□□□ -0.9
COMMD4-201ENST00000267935 SERTAD4-AS1Q5TG53 156 aa9.41□□□□□ -0.9
COMMD4-201ENST00000267935 Q6ZSA8 131 aa9.41□□□□□ -0.9
COMMD4-201ENST00000267935 CYB561D1Q8N8Q1 229 aa9.41□□□□□ -0.9
COMMD4-201ENST00000267935 SYT8Q8NBV8 401 aa9.41□□□□□ -0.9
COMMD4-201ENST00000267935 TMEM167BQ9NRX6 74 aa9.41□□□□□ -0.9
COMMD4-201ENST00000267935 C11orf21Q9P2W6 132 aa9.41□□□□□ -0.9
COMMD4-201ENST00000267935 EPDR1Q9UM22 224 aa9.41□□□□□ -0.9
COMMD4-201ENST00000267935 MYCBP2O75592 4640 aa9.41□□□□□ -0.9
COMMD4-201ENST00000267935 FABP5P3A8MUU1 101 aa9.4□□□□□ -0.9
COMMD4-201ENST00000267935 LECT2O14960 151 aa9.4□□□□□ -0.9
COMMD4-201ENST00000267935 STAG3L2P0CL84 134 aa9.4□□□□□ -0.9
COMMD4-201ENST00000267935 STAG3L3P0CL85 134 aa9.4□□□□□ -0.9
COMMD4-201ENST00000267935 GCHFRP30047 84 aa9.4□□□□□ -0.9
COMMD4-201ENST00000267935 ELOBQ15370 118 aa9.4□□□□□ -0.9
COMMD4-201ENST00000267935 AKR1C8PQ5T2L2 129 aa9.4□□□□□ -0.9
COMMD4-201ENST00000267935 DAZ4Q86SG3 579 aaKnown RBP9.4□□□□□ -0.9
COMMD4-201ENST00000267935 BAALCQ8WXS3 180 aa9.4□□□□□ -0.9
COMMD4-201ENST00000267935 PARLQ9H300 379 aa9.4□□□□□ -0.9
COMMD4-201ENST00000267935 DAZ3Q9NR90 486 aaKnown RBP9.4□□□□□ -0.9
COMMD4-201ENST00000267935 CXorf1O96002 111 aa9.39□□□□□ -0.91
COMMD4-201ENST00000267935 RNASE3P12724 160 aaKnown RBP9.39□□□□□ -0.91
COMMD4-201ENST00000267935 TPT1P13693 172 aaKnown RBP9.39□□□□□ -0.91
COMMD4-201ENST00000267935 ASIPP42127 132 aa9.39□□□□□ -0.91
COMMD4-201ENST00000267935 TMEM75Q8N9X5 138 aa9.39□□□□□ -0.91
COMMD4-201ENST00000267935 RAB24Q969Q5 203 aa9.39□□□□□ -0.91
COMMD4-201ENST00000267935 IGKV2D-24A0A075B6R9 120 aa9.38□□□□□ -0.91
COMMD4-201ENST00000267935 RHODO00212 210 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms