RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 TTTY13Q9BZ97 58 aa6.2□□□□□ -1.42
NEDD1-201ENST00000266742 VCYO14598 125 aa6.2□□□□□ -1.42
NEDD1-201ENST00000266742 RPL39LQ96EH5 51 aaKnown RBP6.2□□□□□ -1.42
NEDD1-201ENST00000266742 ZNF580Q9UK33 172 aa6.2□□□□□ -1.42
NEDD1-201ENST00000266742 CACNA1BQ00975 2339 aa6.2□□□□□ -1.42
NEDD1-201ENST00000266742 ATRXP46100 2492 aa6.2□□□□□ -1.42
NEDD1-201ENST00000266742 IGHV4-30-2A0A087WSY4 118 aa6.2□□□□□ -1.42
NEDD1-201ENST00000266742 MYMXA0A1B0GTQ4 84 aa6.2□□□□□ -1.42
NEDD1-201ENST00000266742 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
NEDD1-201ENST00000266742 A6NJY4 79 aa6.2□□□□□ -1.42
NEDD1-201ENST00000266742 CD7P09564 240 aa6.2□□□□□ -1.42
NEDD1-201ENST00000266742 NEXN-AS1Q8NBZ9 246 aa6.2□□□□□ -1.42
NEDD1-201ENST00000266742 JMJD8Q96S16 334 aa6.2□□□□□ -1.42
NEDD1-201ENST00000266742 BSNQ9UPA5 3926 aa6.19□□□□□ -1.42
NEDD1-201ENST00000266742 TMEM89A2RUT3 159 aa6.19□□□□□ -1.42
NEDD1-201ENST00000266742 KLLNB2CW77 178 aa6.19□□□□□ -1.42
NEDD1-201ENST00000266742 RNASE3P12724 160 aaKnown RBP6.19□□□□□ -1.42
NEDD1-201ENST00000266742 SRD5A1P18405 259 aa6.19□□□□□ -1.42
NEDD1-201ENST00000266742 RPL32P62910 135 aaKnown RBP6.19□□□□□ -1.42
NEDD1-201ENST00000266742 SCGB1D4Q6XE38 83 aa6.19□□□□□ -1.42
NEDD1-201ENST00000266742 IGHV4OR15-8A0A075B7B6 117 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 A0A087WW49 117 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 LINC01619G3V211 115 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 J3QR89 54 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 DEFB1P60022 68 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 ZNF479Q96JC4 524 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 HIVEP3Q5T1R4 2406 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 PRSS29PA6NIE9 313 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 NXPH4O95158 308 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 LCNL1Q6ZST4 164 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 BAALCQ8WXS3 180 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 TMEM141Q96I45 108 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 ODF3Q96PU9 254 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 TRAV12-3A0A0B4J271 114 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 E9PLD3 99 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 DUSP14O95147 198 aaKnown RBP6.18□□□□□ -1.42
NEDD1-201ENST00000266742 MAPKAPK5-AS1Q8N8E1 139 aa6.18□□□□□ -1.42
NEDD1-201ENST00000266742 SPRY2O43597 315 aa6.17□□□□□ -1.42
NEDD1-201ENST00000266742 SRSF9Q13242 221 aaKnown RBP eCLIP6.17□□□□□ -1.42
NEDD1-201ENST00000266742 RPL24P83731 157 aaKnown RBP6.17□□□□□ -1.42
NEDD1-201ENST00000266742 C12orf74Q32Q52 190 aa6.17□□□□□ -1.42
NEDD1-201ENST00000266742 POM121L12Q8N7R1 296 aa6.17□□□□□ -1.42
NEDD1-201ENST00000266742 LINC01356Q8N9X3 169 aa6.17□□□□□ -1.42
NEDD1-201ENST00000266742 ZNF815PA8K554 130 aa6.17□□□□□ -1.42
NEDD1-201ENST00000266742 PMVKQ15126 192 aa6.17□□□□□ -1.42
NEDD1-201ENST00000266742 PRADC1Q9BSG0 188 aa6.17□□□□□ -1.42
NEDD1-201ENST00000266742 J3QLI3 93 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 K7ERJ3 54 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 ZNF688P0C7X2 276 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 PSMB8P28062 276 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 CFHR3Q02985 330 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 DCANP1Q8TF63 244 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 TP53TG1Q9Y2A0 90 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 AKAP6Q13023 2319 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 LRBAP50851 2863 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 IGLL5B9A064 214 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 F8W1H4 67 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 HOXA3O43365 443 aaPredicted RBP6.16□□□□□ -1.42
NEDD1-201ENST00000266742 FAM74A4Q5TZK3 123 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 Q6ZS46 218 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 TACC2O95359 2948 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 ZNF56Q15929 161 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 SUMO4Q6EEV6 95 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 ZFP2Q6ZN57 461 aa6.16□□□□□ -1.42
NEDD1-201ENST00000266742 SDHAF1A6NFY7 115 aa6.15□□□□□ -1.42
NEDD1-201ENST00000266742 G3V4G9 280 aa6.15□□□□□ -1.42
NEDD1-201ENST00000266742 LYRM7Q5U5X0 104 aa6.15□□□□□ -1.42
NEDD1-201ENST00000266742 FOXI2Q6ZQN5 318 aa6.15□□□□□ -1.42
NEDD1-201ENST00000266742 NEGR1Q7Z3B1 354 aa6.15□□□□□ -1.42
NEDD1-201ENST00000266742 TIMM17AQ99595 171 aa6.15□□□□□ -1.42
NEDD1-201ENST00000266742 A0A087WWL8 130 aa6.15□□□□□ -1.42
NEDD1-201ENST00000266742 POLR2KP53803 58 aaKnown RBP6.15□□□□□ -1.42
NEDD1-201ENST00000266742 KIF25-AS1Q9Y6Z4 181 aa6.15□□□□□ -1.42
NEDD1-201ENST00000266742 SAP30O75446 220 aa6.15□□□□□ -1.43
NEDD1-201ENST00000266742 IGHV4-59P01825 116 aa6.15□□□□□ -1.43
NEDD1-201ENST00000266742 DEFB112Q30KQ8 113 aa6.15□□□□□ -1.43
NEDD1-201ENST00000266742 SELENOKQ9Y6D0 94 aa6.15□□□□□ -1.43
NEDD1-201ENST00000266742 TRGV11A0A075B6L2 103 aa6.15□□□□□ -1.43
NEDD1-201ENST00000266742 IGHV1OR15-1A0A075B7D0 117 aa6.15□□□□□ -1.43
NEDD1-201ENST00000266742 A0A0J9YX75 114 aa6.15□□□□□ -1.43
NEDD1-201ENST00000266742 IGKV3-20P01619 116 aa6.15□□□□□ -1.43
NEDD1-201ENST00000266742 ELANEP08246 267 aa6.15□□□□□ -1.43
NEDD1-201ENST00000266742 CD300EQ496F6 205 aaPredicted RBP6.15□□□□□ -1.43
NEDD1-201ENST00000266742 TRPT1Q86TN4 253 aaKnown RBP6.15□□□□□ -1.43
NEDD1-201ENST00000266742 PHLDA1Q8WV24 401 aaPredicted RBP6.15□□□□□ -1.43
NEDD1-201ENST00000266742 WFDC12Q8WWY7 111 aa6.15□□□□□ -1.43
NEDD1-201ENST00000266742 TRBV6-5A0A0K0K1A5 114 aa6.14□□□□□ -1.43
NEDD1-201ENST00000266742 LGALS9O00182 355 aa6.14□□□□□ -1.43
NEDD1-201ENST00000266742 TGFAP01135 160 aa6.14□□□□□ -1.43
NEDD1-201ENST00000266742 LGALS1P09382 135 aaKnown RBP6.14□□□□□ -1.43
NEDD1-201ENST00000266742 RRN3P1Q2M238 152 aa6.14□□□□□ -1.43
NEDD1-201ENST00000266742 TMEM170BQ5T4T1 132 aa6.14□□□□□ -1.43
NEDD1-201ENST00000266742 TRBV7-3A0A075B6L6 115 aa6.14□□□□□ -1.43
NEDD1-201ENST00000266742 TMEM95Q3KNT9 176 aa6.14□□□□□ -1.43
NEDD1-201ENST00000266742 TRBV27A0A0K0K1C4 114 aa6.14□□□□□ -1.43
NEDD1-201ENST00000266742 K7EQG2 157 aa6.14□□□□□ -1.43
NEDD1-201ENST00000266742 LINC00315P59091 139 aa6.14□□□□□ -1.43
NEDD1-201ENST00000266742 RHOHQ15669 191 aa6.14□□□□□ -1.43
NEDD1-201ENST00000266742 MRPL16Q9NX20 251 aaKnown RBP6.14□□□□□ -1.43
NEDD1-201ENST00000266742 ZNF256Q9Y2P7 627 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms