RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CEMP1Q6PRD7 247 aaPredicted RBP6.77□□□□□ -1.33
VAPB-201ENST00000265619 PRADC1Q9BSG0 188 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 TRBV19A0A075B6N1 114 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 ZNF815PA8K554 130 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 TMEM262E9PQX1 116 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 ATP5LO75964 103 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 HIGD1AQ9Y241 93 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 ZFHX3Q15911 3703 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 H7C2G1 150 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 EMP1P54849 157 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 CDSNQ15517 529 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 LRRC75A-AS1Q8N1F1 130 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 OR13C6PQ8NH95 151 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 S4R3C0 116 aa6.76□□□□□ -1.33
VAPB-201ENST00000265619 IGHV3-72A0A0B4J1Y9 119 aa6.76□□□□□ -1.33
VAPB-201ENST00000265619 MRPS12O15235 138 aaKnown RBP6.76□□□□□ -1.33
VAPB-201ENST00000265619 SPRY2O43597 315 aa6.76□□□□□ -1.33
VAPB-201ENST00000265619 IGLV2-23P01705 113 aa6.76□□□□□ -1.33
VAPB-201ENST00000265619 SCGB1C2P0DMR2 95 aa6.76□□□□□ -1.33
VAPB-201ENST00000265619 EDN2P20800 178 aa6.76□□□□□ -1.33
VAPB-201ENST00000265619 HLA-DMBP28068 263 aa6.76□□□□□ -1.33
VAPB-201ENST00000265619 KLRB1Q12918 225 aa6.76□□□□□ -1.33
VAPB-201ENST00000265619 DTX2Q86UW9 622 aa6.76□□□□□ -1.33
VAPB-201ENST00000265619 PRR25Q96S07 402 aa6.76□□□□□ -1.33
VAPB-201ENST00000265619 CCL13Q99616 98 aa6.76□□□□□ -1.33
VAPB-201ENST00000265619 PRB1P04280 392 aa6.75□□□□□ -1.33
VAPB-201ENST00000265619 IGLC6P0CF74 106 aa6.75□□□□□ -1.33
VAPB-201ENST00000265619 CNTFRP26992 372 aa6.75□□□□□ -1.33
VAPB-201ENST00000265619 ZNF672Q499Z4 452 aaPredicted RBP6.75□□□□□ -1.33
VAPB-201ENST00000265619 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
VAPB-201ENST00000265619 V9GYY9 64 aa6.75□□□□□ -1.33
VAPB-201ENST00000265619 SRRM5B3KS81 715 aa6.75□□□□□ -1.33
VAPB-201ENST00000265619 COX6B1P14854 86 aa6.75□□□□□ -1.33
VAPB-201ENST00000265619 FAM216BQ8N7L0 139 aa6.75□□□□□ -1.33
VAPB-201ENST00000265619 DOPEY2Q9Y3R5 2298 aa6.75□□□□□ -1.33
VAPB-201ENST00000265619 LINC01619G3V211 115 aa6.74□□□□□ -1.33
VAPB-201ENST00000265619 DLX1P56177 255 aa6.74□□□□□ -1.33
VAPB-201ENST00000265619 Q8N8P6 123 aa6.74□□□□□ -1.33
VAPB-201ENST00000265619 MYOZ3Q8TDC0 251 aa6.74□□□□□ -1.33
VAPB-201ENST00000265619 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.74□□□□□ -1.33
VAPB-201ENST00000265619 TSPEAR-AS2P59090 65 aa6.74□□□□□ -1.33
VAPB-201ENST00000265619 C14orf178Q8N769 122 aaPredicted RBP6.74□□□□□ -1.33
VAPB-201ENST00000265619 BAALCQ8WXS3 180 aa6.74□□□□□ -1.33
VAPB-201ENST00000265619 NXT2Q9NPJ8 142 aaKnown RBP6.74□□□□□ -1.33
VAPB-201ENST00000265619 TRBV6-1A0A0K0K1D8 114 aa6.74□□□□□ -1.33
VAPB-201ENST00000265619 FAM19A5Q7Z5A7 132 aaPredicted RBP6.74□□□□□ -1.33
VAPB-201ENST00000265619 NRACQ8N912 160 aa6.74□□□□□ -1.33
VAPB-201ENST00000265619 F8VRH5 84 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 RS1O15537 224 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 CCL3L1P16619 93 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 Q6Q795 121 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 SPANXA1Q9NS26 97 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 IGHV4-39P01824 125 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 GNLYP22749 145 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 PLNP26678 52 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 ASIPP42127 132 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 A0A0J9YY99 117 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 ORM1P02763 201 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 LAGE3Q14657 143 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 TMEM167AQ8TBQ9 72 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 DUX3Q96PT4 197 aa6.73□□□□□ -1.33
VAPB-201ENST00000265619 TRAV8-4A0A0B4J246 113 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 H7C1H1 209 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 IGKV1-17P01599 117 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 IGHV1-46P01743 117 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 IGHV3-30P01768 117 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 IGHV3-30-5P0DP03 117 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 ZNF22P17026 224 aaPredicted RBP6.72□□□□□ -1.33
VAPB-201ENST00000265619 ZNF56Q15929 161 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 ZNF833PQ6ZTB9 187 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 C10orf126Q8N4M7 172 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 OR10J6PQ8NGY7 276 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 CYSTM1Q9H1C7 97 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 BEX4Q9NWD9 120 aaPredicted RBP6.72□□□□□ -1.33
VAPB-201ENST00000265619 TMEM14CQ9P0S9 112 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 FASNP49327 2511 aaKnown RBP6.72□□□□□ -1.33
VAPB-201ENST00000265619 IGLV1-44P01699 117 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 CD3EP07766 207 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 EDA2RQ9HAV5 297 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 HRNRQ86YZ3 2850 aaPredicted RBP6.72□□□□□ -1.33
VAPB-201ENST00000265619 TRAV2A0A0B4J234 112 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 INS-IGF2F8WCM5 200 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 TIMM23O14925 209 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 SUB1P53999 127 aaKnown RBP eCLIP6.72□□□□□ -1.33
VAPB-201ENST00000265619 PSMG4Q5JS54 123 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 C11orf21Q9P2W6 132 aa6.72□□□□□ -1.33
VAPB-201ENST00000265619 A0A0U1RRA0 63 aa6.71□□□□□ -1.33
VAPB-201ENST00000265619 ZNF415Q09FC8 603 aa6.71□□□□□ -1.33
VAPB-201ENST00000265619 ERCC8Q13216 396 aa6.71□□□□□ -1.33
VAPB-201ENST00000265619 NEXN-AS1Q8NBZ9 246 aa6.71□□□□□ -1.33
VAPB-201ENST00000265619 SONP18583 2426 aaKnown RBP6.71□□□□□ -1.34
VAPB-201ENST00000265619 IGHG4P01861 327 aa6.71□□□□□ -1.34
VAPB-201ENST00000265619 DNAJC30Q96LL9 226 aa6.71□□□□□ -1.34
VAPB-201ENST00000265619 CHD6Q8TD26 2715 aa6.71□□□□□ -1.34
VAPB-201ENST00000265619 DUSP14O95147 198 aaKnown RBP6.7□□□□□ -1.34
VAPB-201ENST00000265619 IGFBPL1Q8WX77 278 aa6.7□□□□□ -1.34
VAPB-201ENST00000265619 IGHV3OR16-8A0A075B7F1 116 aa6.7□□□□□ -1.34
VAPB-201ENST00000265619 FAM236AA0A1B0GUQ0 79 aa6.7□□□□□ -1.34
VAPB-201ENST00000265619 FAM236BA0A1B0GV22 79 aa6.7□□□□□ -1.34
VAPB-201ENST00000265619 RBAKDNA6NC62 111 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms