RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 C20orf78Q9BR46 151 aa12.9□□□□□ -0.34
SCAP-201ENST00000265565 WI2-2373I1.2A0A1W2PRP0 233 aa12.9□□□□□ -0.34
SCAP-201ENST00000265565 FANCD2OSQ96PS1 177 aa12.9□□□□□ -0.34
SCAP-201ENST00000265565 TRGV1A0A0A0MS02 117 aa12.9□□□□□ -0.35
SCAP-201ENST00000265565 ODF1Q14990 250 aa12.9□□□□□ -0.35
SCAP-201ENST00000265565 MSRB2Q9Y3D2 182 aa12.9□□□□□ -0.35
SCAP-201ENST00000265565 IGHV3-16A0A0C4DH30 117 aa12.89□□□□□ -0.35
SCAP-201ENST00000265565 RNASE13Q5GAN3 156 aaKnown RBP12.89□□□□□ -0.35
SCAP-201ENST00000265565 FOXI2Q6ZQN5 318 aa12.89□□□□□ -0.35
SCAP-201ENST00000265565 CHD7Q9P2D1 2997 aa12.89□□□□□ -0.35
SCAP-201ENST00000265565 IGHV1-69DA0A0B4J2H0 117 aa12.89□□□□□ -0.35
SCAP-201ENST00000265565 NDUFA4O00483 81 aa12.89□□□□□ -0.35
SCAP-201ENST00000265565 IGHV1-69P01742 117 aa12.89□□□□□ -0.35
SCAP-201ENST00000265565 LINC00574Q9H8X3 128 aa12.89□□□□□ -0.35
SCAP-201ENST00000265565 MORN3Q6PF18 240 aaPredicted RBP12.89□□□□□ -0.35
SCAP-201ENST00000265565 TMEM141Q96I45 108 aa12.88□□□□□ -0.35
SCAP-201ENST00000265565 ABCA2Q9BZC7 2435 aa12.88□□□□□ -0.35
SCAP-201ENST00000265565 B4DSR2 109 aa12.88□□□□□ -0.35
SCAP-201ENST00000265565 LINC00158P58513 81 aa12.88□□□□□ -0.35
SCAP-201ENST00000265565 MAPK1IP1LQ8NDC0 245 aa12.88□□□□□ -0.35
SCAP-201ENST00000265565 VWC2LB2RUY7 222 aa12.88□□□□□ -0.35
SCAP-201ENST00000265565 NPBQ8NG41 125 aa12.88□□□□□ -0.35
SCAP-201ENST00000265565 LRP4O75096 1905 aa12.87□□□□□ -0.35
SCAP-201ENST00000265565 ATP6V0BQ99437 205 aa12.87□□□□□ -0.35
SCAP-201ENST00000265565 CHCHD5Q9BSY4 110 aa12.87□□□□□ -0.35
SCAP-201ENST00000265565 IGHV3-38A0A0C4DH36 116 aa12.87□□□□□ -0.35
SCAP-201ENST00000265565 PRIMA1Q86XR5 153 aa12.87□□□□□ -0.35
SCAP-201ENST00000265565 CEP192Q8TEP8 1941 aa12.87□□□□□ -0.35
SCAP-201ENST00000265565 TRGV4A0A0C4DH28 118 aa12.87□□□□□ -0.35
SCAP-201ENST00000265565 HOXB4P17483 251 aaPredicted RBP12.87□□□□□ -0.35
SCAP-201ENST00000265565 RBX1P62877 108 aa12.86□□□□□ -0.35
SCAP-201ENST00000265565 ZNF415Q09FC8 603 aa12.86□□□□□ -0.35
SCAP-201ENST00000265565 Q8N9W7 124 aa12.86□□□□□ -0.35
SCAP-201ENST00000265565 USP9YO00507 2555 aaPredicted RBP12.86□□□□□ -0.35
SCAP-201ENST00000265565 IGHV1OR15-1A0A075B7D0 117 aa12.86□□□□□ -0.35
SCAP-201ENST00000265565 SLC25A20O43772 301 aa12.85□□□□□ -0.35
SCAP-201ENST00000265565 USP9XQ93008 2570 aaPredicted RBP12.85□□□□□ -0.35
SCAP-201ENST00000265565 CENPVL3A0A0U1RRI6 287 aa12.85□□□□□ -0.35
SCAP-201ENST00000265565 ZNF493Q6ZR52 646 aa12.85□□□□□ -0.35
SCAP-201ENST00000265565 CPAMD8Q8IZJ3 1885 aa12.85□□□□□ -0.35
SCAP-201ENST00000265565 RBAKDNA6NC62 111 aa12.85□□□□□ -0.35
SCAP-201ENST00000265565 CRIP1P50238 77 aa12.85□□□□□ -0.35
SCAP-201ENST00000265565 RPL36AP83881 106 aaKnown RBP12.85□□□□□ -0.35
SCAP-201ENST00000265565 RPL36ALQ969Q0 106 aaKnown RBP12.85□□□□□ -0.35
SCAP-201ENST00000265565 NDUFA12Q9UI09 145 aa12.85□□□□□ -0.35
SCAP-201ENST00000265565 I3L3M4 83 aa12.85□□□□□ -0.35
SCAP-201ENST00000265565 SP5Q6BEB4 398 aaPredicted RBP12.85□□□□□ -0.35
SCAP-201ENST00000265565 C11orf68Q9H3H3 251 aaKnown RBP12.85□□□□□ -0.35
SCAP-201ENST00000265565 NAV2Q8IVL1 2488 aa12.85□□□□□ -0.35
SCAP-201ENST00000265565 DSCAMO60469 2012 aa12.84□□□□□ -0.35
SCAP-201ENST00000265565 Q8N976 141 aa12.84□□□□□ -0.35
SCAP-201ENST00000265565 HTTP42858 3142 aa12.84□□□□□ -0.35
SCAP-201ENST00000265565 MYCNOSP40205 109 aa12.84□□□□□ -0.35
SCAP-201ENST00000265565 NTN5Q8WTR8 489 aaPredicted RBP12.84□□□□□ -0.35
SCAP-201ENST00000265565 RANBP2P49792 3224 aaKnown RBP12.83□□□□□ -0.36
SCAP-201ENST00000265565 HIGD1BQ9P298 99 aa12.83□□□□□ -0.36
SCAP-201ENST00000265565 XCL2Q9UBD3 114 aa12.83□□□□□ -0.36
SCAP-201ENST00000265565 IGHV7-4-1A0A0J9YVY3 117 aa12.83□□□□□ -0.36
SCAP-201ENST00000265565 RPL39P62891 51 aaKnown RBP12.83□□□□□ -0.36
SCAP-201ENST00000265565 MKI67P46013 3256 aaKnown RBP12.82□□□□□ -0.36
SCAP-201ENST00000265565 G3V4G9 280 aa12.82□□□□□ -0.36
SCAP-201ENST00000265565 PAX4O43316 350 aa12.82□□□□□ -0.36
SCAP-201ENST00000265565 MSMBP08118 114 aa12.82□□□□□ -0.36
SCAP-201ENST00000265565 HIVEP3Q5T1R4 2406 aa12.82□□□□□ -0.36
SCAP-201ENST00000265565 TRBV6-1A0A0K0K1D8 114 aa12.82□□□□□ -0.36
SCAP-201ENST00000265565 ANKRD11Q6UB99 2663 aaPredicted RBP12.82□□□□□ -0.36
SCAP-201ENST00000265565 LAMA2P24043 3122 aaKnown RBP12.82□□□□□ -0.36
SCAP-201ENST00000265565 PIEZO1Q92508 2521 aa12.81□□□□□ -0.36
SCAP-201ENST00000265565 GATD1Q8NB37 220 aa12.81□□□□□ -0.36
SCAP-201ENST00000265565 RASL10AQ92737 203 aa12.81□□□□□ -0.36
SCAP-201ENST00000265565 LENEPQ9Y5L5 61 aa12.81□□□□□ -0.36
SCAP-201ENST00000265565 H3BMM0 161 aa12.81□□□□□ -0.36
SCAP-201ENST00000265565 UBE2WQ96B02 151 aa12.81□□□□□ -0.36
SCAP-201ENST00000265565 IGKV2D-26A0A0A0MRZ7 120 aa12.81□□□□□ -0.36
SCAP-201ENST00000265565 RBMY1BA6NDE4 496 aaKnown RBP12.81□□□□□ -0.36
SCAP-201ENST00000265565 RBMY1EA6NEQ0 496 aaKnown RBP12.81□□□□□ -0.36
SCAP-201ENST00000265565 RBMY1DP0C7P1 496 aaKnown RBP12.81□□□□□ -0.36
SCAP-201ENST00000265565 RBMY1A1P0DJD3 496 aaKnown RBP12.81□□□□□ -0.36
SCAP-201ENST00000265565 RBMY1CP0DJD4 496 aa12.81□□□□□ -0.36
SCAP-201ENST00000265565 BLCAPP62952 87 aa12.81□□□□□ -0.36
SCAP-201ENST00000265565 HTN3P15516 51 aa12.81□□□□□ -0.36
SCAP-201ENST00000265565 ZFP36P26651 326 aaKnown RBP12.8□□□□□ -0.36
SCAP-201ENST00000265565 CFC1BP0CG36 223 aa12.8□□□□□ -0.36
SCAP-201ENST00000265565 CFC1P0CG37 223 aa12.8□□□□□ -0.36
SCAP-201ENST00000265565 MRPL53Q96EL3 112 aaKnown RBP12.8□□□□□ -0.36
SCAP-201ENST00000265565 A0A0J9YXV3 536 aa12.79□□□□□ -0.36
SCAP-201ENST00000265565 CRPP02741 224 aa12.79□□□□□ -0.36
SCAP-201ENST00000265565 TCTEX1D4Q5JR98 221 aa12.79□□□□□ -0.36
SCAP-201ENST00000265565 PTH2Q96A98 100 aa12.79□□□□□ -0.36
SCAP-201ENST00000265565 PF4P02776 101 aa12.79□□□□□ -0.36
SCAP-201ENST00000265565 BRCA2P51587 3418 aa12.79□□□□□ -0.36
SCAP-201ENST00000265565 A4D1N5 150 aa12.78□□□□□ -0.36
SCAP-201ENST00000265565 IGLV2-11P01706 119 aa12.78□□□□□ -0.36
SCAP-201ENST00000265565 ZFP2Q6ZN57 461 aa12.78□□□□□ -0.36
SCAP-201ENST00000265565 SUMO4Q6EEV6 95 aa12.77□□□□□ -0.36
SCAP-201ENST00000265565 URB1-AS1Q96HZ7 61 aa12.77□□□□□ -0.36
SCAP-201ENST00000265565 JPT2Q9H910 190 aa12.77□□□□□ -0.36
SCAP-201ENST00000265565 LINC01548A6NM66 108 aa12.77□□□□□ -0.37
SCAP-201ENST00000265565 IGLC6P0CF74 106 aa12.77□□□□□ -0.37
SCAP-201ENST00000265565 ZNRF2Q8NHG8 242 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms