RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 GAS8-AS1O95177 125 aa11.68□□□□□ -0.54
VPS26A-201ENST00000263559 SCGB1D1O95968 90 aa11.68□□□□□ -0.54
VPS26A-201ENST00000263559 PMCHL1Q16048 86 aa11.68□□□□□ -0.54
VPS26A-201ENST00000263559 MUC4Q99102 2169 aa11.68□□□□□ -0.54
VPS26A-201ENST00000263559 C2CD3Q4AC94 2353 aa11.68□□□□□ -0.54
VPS26A-201ENST00000263559 RBMY1BA6NDE4 496 aaKnown RBP11.68□□□□□ -0.54
VPS26A-201ENST00000263559 RBMY1EA6NEQ0 496 aaKnown RBP11.68□□□□□ -0.54
VPS26A-201ENST00000263559 CD7P09564 240 aa11.68□□□□□ -0.54
VPS26A-201ENST00000263559 RBMY1DP0C7P1 496 aaKnown RBP11.68□□□□□ -0.54
VPS26A-201ENST00000263559 TDRG1Q3Y452 100 aa11.68□□□□□ -0.54
VPS26A-201ENST00000263559 SMIM15Q7Z3B0 74 aa11.68□□□□□ -0.54
VPS26A-201ENST00000263559 FLNBO75369 2602 aaKnown RBP11.68□□□□□ -0.54
VPS26A-201ENST00000263559 SAP30O75446 220 aa11.67□□□□□ -0.54
VPS26A-201ENST00000263559 NPYP01303 97 aa11.67□□□□□ -0.54
VPS26A-201ENST00000263559 NDUFA11Q86Y39 141 aa11.67□□□□□ -0.54
VPS26A-201ENST00000263559 LOC389332A0A1B0GUA5 103 aa11.67□□□□□ -0.54
VPS26A-201ENST00000263559 PRSS3P2Q8NHM4 247 aa11.67□□□□□ -0.54
VPS26A-201ENST00000263559 GSN-AS1Q9NRJ2 163 aa11.67□□□□□ -0.54
VPS26A-201ENST00000263559 IFI27P40305 119 aaPredicted RBP11.66□□□□□ -0.54
VPS26A-201ENST00000263559 ODF3L2Q3SX64 289 aa11.66□□□□□ -0.54
VPS26A-201ENST00000263559 IGHV1-24A0A0C4DH33 117 aa11.66□□□□□ -0.54
VPS26A-201ENST00000263559 CRXO43186 299 aaPredicted RBP11.66□□□□□ -0.54
VPS26A-201ENST00000263559 PPBPP02775 128 aa11.66□□□□□ -0.54
VPS26A-201ENST00000263559 KRTDAPP60985 99 aa11.66□□□□□ -0.54
VPS26A-201ENST00000263559 IGHV1OR15-1A0A075B7D0 117 aa11.65□□□□□ -0.54
VPS26A-201ENST00000263559 RBMY1A1P0DJD3 496 aaKnown RBP11.65□□□□□ -0.54
VPS26A-201ENST00000263559 RBMY1CP0DJD4 496 aa11.65□□□□□ -0.54
VPS26A-201ENST00000263559 GATA1P15976 413 aaPredicted RBP11.65□□□□□ -0.54
VPS26A-201ENST00000263559 RBMY1FQ15415 496 aaKnown RBP11.65□□□□□ -0.54
VPS26A-201ENST00000263559 Q8N1Y9 231 aa11.64□□□□□ -0.55
VPS26A-201ENST00000263559 AP5S1Q9NUS5 200 aa11.64□□□□□ -0.55
VPS26A-201ENST00000263559 NIPBLQ6KC79 2804 aaeCLIP11.64□□□□□ -0.55
VPS26A-201ENST00000263559 IGHV3-16A0A0C4DH30 117 aa11.64□□□□□ -0.55
VPS26A-201ENST00000263559 C3orf79P0CE67 100 aa11.64□□□□□ -0.55
VPS26A-201ENST00000263559 FA2HQ7L5A8 372 aa11.64□□□□□ -0.55
VPS26A-201ENST00000263559 MDFICQ9P1T7 246 aa11.64□□□□□ -0.55
VPS26A-201ENST00000263559 TRAV26-2A0A0B4J265 109 aa11.63□□□□□ -0.55
VPS26A-201ENST00000263559 IGLV1-51P01701 117 aa11.63□□□□□ -0.55
VPS26A-201ENST00000263559 C14orf178Q8N769 122 aaPredicted RBP11.63□□□□□ -0.55
VPS26A-201ENST00000263559 TNFRSF6BO95407 300 aa11.63□□□□□ -0.55
VPS26A-201ENST00000263559 NXPH4O95158 308 aa11.63□□□□□ -0.55
VPS26A-201ENST00000263559 OR11H12B2RN74 326 aa11.62□□□□□ -0.55
VPS26A-201ENST00000263559 S100A12P80511 92 aa11.62□□□□□ -0.55
VPS26A-201ENST00000263559 LAMTOR2Q9Y2Q5 125 aa11.62□□□□□ -0.55
VPS26A-201ENST00000263559 Q8N976 141 aa11.62□□□□□ -0.55
VPS26A-201ENST00000263559 C9orf85Q96MD7 179 aa11.62□□□□□ -0.55
VPS26A-201ENST00000263559 DPH3P1Q9H4G8 78 aa11.62□□□□□ -0.55
VPS26A-201ENST00000263559 F8P00451 2351 aa11.61□□□□□ -0.55
VPS26A-201ENST00000263559 PF4P02776 101 aa11.61□□□□□ -0.55
VPS26A-201ENST00000263559 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.61□□□□□ -0.55
VPS26A-201ENST00000263559 MAP1LC3AQ9H492 121 aa11.61□□□□□ -0.55
VPS26A-201ENST00000263559 LEPROTL1O95214 131 aa11.61□□□□□ -0.55
VPS26A-201ENST00000263559 LINC00173Q6ZV60 143 aa11.61□□□□□ -0.55
VPS26A-201ENST00000263559 OR2K2Q8NGT1 345 aa11.61□□□□□ -0.55
VPS26A-201ENST00000263559 NRACQ8N912 160 aa11.6□□□□□ -0.55
VPS26A-201ENST00000263559 AP1S3Q96PC3 154 aa11.6□□□□□ -0.55
VPS26A-201ENST00000263559 JPT2Q9H910 190 aa11.6□□□□□ -0.55
VPS26A-201ENST00000263559 HTN1P15515 57 aa11.6□□□□□ -0.55
VPS26A-201ENST00000263559 STHQ8IWL8 128 aa11.6□□□□□ -0.55
VPS26A-201ENST00000263559 LINC00482Q8N8I6 264 aa11.6□□□□□ -0.55
VPS26A-201ENST00000263559 CBY3A6NI87 242 aa11.59□□□□□ -0.55
VPS26A-201ENST00000263559 ZNF664Q8N3J9 261 aa11.59□□□□□ -0.55
VPS26A-201ENST00000263559 MRAP2Q96G30 205 aa11.59□□□□□ -0.55
VPS26A-201ENST00000263559 CLUHP3Q96NS8 147 aa11.59□□□□□ -0.55
VPS26A-201ENST00000263559 PRO1933Q9H354 126 aa11.59□□□□□ -0.55
VPS26A-201ENST00000263559 KIF25-AS1Q9Y6Z4 181 aa11.59□□□□□ -0.55
VPS26A-201ENST00000263559 TRGV11A0A075B6L2 103 aa11.58□□□□□ -0.56
VPS26A-201ENST00000263559 PRM2P04554 102 aa11.58□□□□□ -0.56
VPS26A-201ENST00000263559 BTF3P20290 206 aaKnown RBP11.58□□□□□ -0.56
VPS26A-201ENST00000263559 A0A096LNJ9 63 aa11.58□□□□□ -0.56
VPS26A-201ENST00000263559 MGPP08493 103 aa11.58□□□□□ -0.56
VPS26A-201ENST00000263559 TRPT1Q86TN4 253 aaKnown RBP11.58□□□□□ -0.56
VPS26A-201ENST00000263559 LINC00315P59091 139 aa11.57□□□□□ -0.56
VPS26A-201ENST00000263559 BEAN1Q3B7T3 259 aa11.57□□□□□ -0.56
VPS26A-201ENST00000263559 TEX43Q6ZNM6 134 aa11.57□□□□□ -0.56
VPS26A-201ENST00000263559 CMC4P56277 68 aaPredicted RBP11.57□□□□□ -0.56
VPS26A-201ENST00000263559 PKIAP61925 76 aa11.56□□□□□ -0.56
VPS26A-201ENST00000263559 RASL10AQ92737 203 aa11.56□□□□□ -0.56
VPS26A-201ENST00000263559 TMEM70Q9BUB7 260 aa11.56□□□□□ -0.56
VPS26A-201ENST00000263559 NXT2Q9NPJ8 142 aaKnown RBP11.56□□□□□ -0.56
VPS26A-201ENST00000263559 XCL2Q9UBD3 114 aa11.56□□□□□ -0.56
VPS26A-201ENST00000263559 IGLV2-18A0A075B6J9 118 aa11.56□□□□□ -0.56
VPS26A-201ENST00000263559 A0A087WWL8 130 aa11.56□□□□□ -0.56
VPS26A-201ENST00000263559 LINC01546A6NGU7 62 aa11.56□□□□□ -0.56
VPS26A-201ENST00000263559 PRSS47A8MTI9 375 aa11.56□□□□□ -0.56
VPS26A-201ENST00000263559 SMIM17P0DL12 118 aa11.56□□□□□ -0.56
VPS26A-201ENST00000263559 POM121L12Q8N7R1 296 aa11.56□□□□□ -0.56
VPS26A-201ENST00000263559 SYT8Q8NBV8 401 aa11.56□□□□□ -0.56
VPS26A-201ENST00000263559 WFDC10AQ9H1F0 79 aa11.56□□□□□ -0.56
VPS26A-201ENST00000263559 INSP01308 110 aa11.55□□□□□ -0.56
VPS26A-201ENST00000263559 SPATA12Q7Z6I5 190 aa11.55□□□□□ -0.56
VPS26A-201ENST00000263559 LINC01587Q99440 93 aa11.55□□□□□ -0.56
VPS26A-201ENST00000263559 C19orf73Q9NVV2 129 aa11.55□□□□□ -0.56
VPS26A-201ENST00000263559 DEFB125Q8N687 156 aa11.55□□□□□ -0.56
VPS26A-201ENST00000263559 Q8N8P6 123 aa11.55□□□□□ -0.56
VPS26A-201ENST00000263559 HSPB8Q9UJY1 196 aa11.55□□□□□ -0.56
VPS26A-201ENST00000263559 TENM1Q9UKZ4 2725 aa11.55□□□□□ -0.56
VPS26A-201ENST00000263559 SPATA3Q8NHX4 192 aa11.54□□□□□ -0.56
VPS26A-201ENST00000263559 RPL39LQ96EH5 51 aaKnown RBP11.54□□□□□ -0.56
VPS26A-201ENST00000263559 CITED1Q99966 193 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms