RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 TMEM191AQ9H0A3 160 aa20.5■□□□□ 0.87
SMARCD3-201ENST00000262188 TRAV25A0A0B4J276 109 aa20.5■□□□□ 0.87
SMARCD3-201ENST00000262188 PRAC2D3DTV9 90 aa20.5■□□□□ 0.87
SMARCD3-201ENST00000262188 M0R2Z0 102 aa20.5■□□□□ 0.87
SMARCD3-201ENST00000262188 INSL3P51460 131 aa20.5■□□□□ 0.87
SMARCD3-201ENST00000262188 FOXI2Q6ZQN5 318 aa20.5■□□□□ 0.87
SMARCD3-201ENST00000262188 C11orf52Q96A22 123 aa20.5■□□□□ 0.87
SMARCD3-201ENST00000262188 GTSF1LQ9H1H1 148 aa20.5■□□□□ 0.87
SMARCD3-201ENST00000262188 TRBV20OR9-2A0A075B6H5 130 aa20.49■□□□□ 0.87
SMARCD3-201ENST00000262188 GAGE12HA6NDE8 117 aa20.49■□□□□ 0.87
SMARCD3-201ENST00000262188 PSMG4Q5JS54 123 aa20.49■□□□□ 0.87
SMARCD3-201ENST00000262188 SLC50A1Q9BRV3 221 aa20.49■□□□□ 0.87
SMARCD3-201ENST00000262188 OTORQ9NRC9 128 aa20.49■□□□□ 0.87
SMARCD3-201ENST00000262188 PGPEP1Q9NXJ5 209 aa20.49■□□□□ 0.87
SMARCD3-201ENST00000262188 V9GYV3 84 aa20.49■□□□□ 0.87
SMARCD3-201ENST00000262188 APCSP02743 223 aa20.48■□□□□ 0.87
SMARCD3-201ENST00000262188 SLC25A5P05141 298 aaKnown RBP20.48■□□□□ 0.87
SMARCD3-201ENST00000262188 AAMDCQ9H7C9 122 aa20.48■□□□□ 0.87
SMARCD3-201ENST00000262188 ISLRO14498 428 aa20.48■□□□□ 0.87
SMARCD3-201ENST00000262188 FAM19A2Q8N3H0 131 aa20.48■□□□□ 0.87
SMARCD3-201ENST00000262188 F6UB75 175 aa20.47■□□□□ 0.87
SMARCD3-201ENST00000262188 H0Y8G0 127 aa20.47■□□□□ 0.87
SMARCD3-201ENST00000262188 CD7P09564 240 aa20.47■□□□□ 0.87
SMARCD3-201ENST00000262188 OSTCQ9NRP0 149 aa20.47■□□□□ 0.87
SMARCD3-201ENST00000262188 SCO2A0A1W2PP80 73 aa20.46■□□□□ 0.87
SMARCD3-201ENST00000262188 WFDC10AQ9H1F0 79 aa20.46■□□□□ 0.87
SMARCD3-201ENST00000262188 TMEM97Q5BJF2 176 aa20.45■□□□□ 0.86
SMARCD3-201ENST00000262188 LYPD1Q8N2G4 141 aa20.45■□□□□ 0.86
SMARCD3-201ENST00000262188 OR10AG1Q8NH19 301 aa20.45■□□□□ 0.86
SMARCD3-201ENST00000262188 SGK494Q96LW2 274 aa20.45■□□□□ 0.86
SMARCD3-201ENST00000262188 DEFB131AP59861 70 aa20.45■□□□□ 0.86
SMARCD3-201ENST00000262188 ODF3L2Q3SX64 289 aa20.45■□□□□ 0.86
SMARCD3-201ENST00000262188 APRG1Q8IVJ8 170 aa20.45■□□□□ 0.86
SMARCD3-201ENST00000262188 LINC00479Q96M42 142 aa20.45■□□□□ 0.86
SMARCD3-201ENST00000262188 IGKV2-40A0A087WW87 121 aaPredicted RBP20.44■□□□□ 0.86
SMARCD3-201ENST00000262188 K7EQM0 130 aa20.44■□□□□ 0.86
SMARCD3-201ENST00000262188 IGKV2D-40P01614 121 aaPredicted RBP20.44■□□□□ 0.86
SMARCD3-201ENST00000262188 ID1P41134 155 aa20.44■□□□□ 0.86
SMARCD3-201ENST00000262188 ASCL2Q99929 193 aa20.44■□□□□ 0.86
SMARCD3-201ENST00000262188 GEMIN7Q9H840 131 aaKnown RBP20.44■□□□□ 0.86
SMARCD3-201ENST00000262188 MAP6D1Q9H9H5 199 aa20.44■□□□□ 0.86
SMARCD3-201ENST00000262188 BEAN1Q3B7T3 259 aa20.43■□□□□ 0.86
SMARCD3-201ENST00000262188 GDF5OSQ5U4N7 250 aa20.43■□□□□ 0.86
SMARCD3-201ENST00000262188 EPDR1Q9UM22 224 aa20.43■□□□□ 0.86
SMARCD3-201ENST00000262188 ARL2-SNX15V9GYD0 113 aa20.43■□□□□ 0.86
SMARCD3-201ENST00000262188 KRTAP10-11P60412 298 aa20.43■□□□□ 0.86
SMARCD3-201ENST00000262188 SNRPD3P62318 126 aaKnown RBP20.43■□□□□ 0.86
SMARCD3-201ENST00000262188 WIPF1O43516 503 aa20.42■□□□□ 0.86
SMARCD3-201ENST00000262188 GOLT1AQ6ZVE7 132 aa20.42■□□□□ 0.86
SMARCD3-201ENST00000262188 TRAV2A0A0B4J234 112 aa20.41■□□□□ 0.86
SMARCD3-201ENST00000262188 PGPEP1LA6NFU8 196 aa20.41■□□□□ 0.86
SMARCD3-201ENST00000262188 AGRNO00468 2067 aa20.41■□□□□ 0.86
SMARCD3-201ENST00000262188 TRAV8-1A0A0A6YYK1 113 aa20.41■□□□□ 0.86
SMARCD3-201ENST00000262188 K7EN84 100 aa20.41■□□□□ 0.86
SMARCD3-201ENST00000262188 OR5AL1P0C617 328 aa20.41■□□□□ 0.86
SMARCD3-201ENST00000262188 COX8AP10176 69 aa20.41■□□□□ 0.86
SMARCD3-201ENST00000262188 ERCC8Q13216 396 aa20.41■□□□□ 0.86
SMARCD3-201ENST00000262188 MRPL16Q9NX20 251 aaKnown RBP20.41■□□□□ 0.86
SMARCD3-201ENST00000262188 KNCNA6PVL3 124 aa20.4■□□□□ 0.86
SMARCD3-201ENST00000262188 TCRAP04437 139 aa20.4■□□□□ 0.86
SMARCD3-201ENST00000262188 PRR25Q96S07 402 aa20.4■□□□□ 0.86
SMARCD3-201ENST00000262188 SMIM27A0A1W2PRY6 76 aa20.39■□□□□ 0.86
SMARCD3-201ENST00000262188 SYS1-DBNDD2H3BUS1 97 aa20.39■□□□□ 0.86
SMARCD3-201ENST00000262188 GNG4P50150 75 aa20.39■□□□□ 0.86
SMARCD3-201ENST00000262188 VGLL1Q99990 258 aa20.39■□□□□ 0.86
SMARCD3-201ENST00000262188 PEX7O00628 323 aa20.39■□□□□ 0.85
SMARCD3-201ENST00000262188 MGAM2Q2M2H8 2515 aa20.38■□□□□ 0.85
SMARCD3-201ENST00000262188 A0A1W2PPM0 123 aa20.38■□□□□ 0.85
SMARCD3-201ENST00000262188 CSN1S1P47710 185 aa20.38■□□□□ 0.85
SMARCD3-201ENST00000262188 SPATA12Q7Z6I5 190 aa20.38■□□□□ 0.85
SMARCD3-201ENST00000262188 CHCHD1Q96BP2 118 aaKnown RBP20.38■□□□□ 0.85
SMARCD3-201ENST00000262188 SPCS1Q9Y6A9 102 aa20.38■□□□□ 0.85
SMARCD3-201ENST00000262188 KIAA1644Q3SXP7 199 aa20.37■□□□□ 0.85
SMARCD3-201ENST00000262188 C19orf73Q9NVV2 129 aa20.37■□□□□ 0.85
SMARCD3-201ENST00000262188 SAMD5Q5TGI4 173 aa20.37■□□□□ 0.85
SMARCD3-201ENST00000262188 FAM110AQ9BQ89 295 aa20.37■□□□□ 0.85
SMARCD3-201ENST00000262188 IGKV3-20P01619 116 aa20.36■□□□□ 0.85
SMARCD3-201ENST00000262188 FABP2P12104 132 aa20.35■□□□□ 0.85
SMARCD3-201ENST00000262188 TEX48A0A1B0GUV7 120 aa20.35■□□□□ 0.85
SMARCD3-201ENST00000262188 Q8TAT8 98 aa20.35■□□□□ 0.85
SMARCD3-201ENST00000262188 MRPL53Q96EL3 112 aaKnown RBP20.35■□□□□ 0.85
SMARCD3-201ENST00000262188 NOTCH1P46531 2555 aa20.35■□□□□ 0.85
SMARCD3-201ENST00000262188 H3BUT2 72 aa20.34■□□□□ 0.85
SMARCD3-201ENST00000262188 SIVA1O15304 175 aa20.34■□□□□ 0.85
SMARCD3-201ENST00000262188 FRMD6-AS1P0C7T7 363 aa20.34■□□□□ 0.85
SMARCD3-201ENST00000262188 RPL24P83731 157 aaKnown RBP20.34■□□□□ 0.85
SMARCD3-201ENST00000262188 C2orf91Q6ZV80 131 aa20.34■□□□□ 0.85
SMARCD3-201ENST00000262188 OR8A1Q8NGG7 326 aa20.34■□□□□ 0.85
SMARCD3-201ENST00000262188 A0A0J9YX75 114 aa20.32■□□□□ 0.84
SMARCD3-201ENST00000262188 IGLV2-11P01706 119 aa20.32■□□□□ 0.84
SMARCD3-201ENST00000262188 EGFEM1PQ0D2K5 195 aa20.32■□□□□ 0.84
SMARCD3-201ENST00000262188 GTSCR1Q86UQ5 136 aa20.32■□□□□ 0.84
SMARCD3-201ENST00000262188 AGPAT4-IT1Q9H0P7 198 aa20.32■□□□□ 0.84
SMARCD3-201ENST00000262188 DNAH3Q8TD57 4116 aa20.32■□□□□ 0.84
SMARCD3-201ENST00000262188 PRB2P02812 416 aaPredicted RBP20.32■□□□□ 0.84
SMARCD3-201ENST00000262188 hDV102S1A0JD36 115 aa20.31■□□□□ 0.84
SMARCD3-201ENST00000262188 F8W1H4 67 aa20.3■□□□□ 0.84
SMARCD3-201ENST00000262188 Q8N1Y9 231 aa20.3■□□□□ 0.84
SMARCD3-201ENST00000262188 RNASEKQ6P5S7 137 aaKnown RBP20.3■□□□□ 0.84
SMARCD3-201ENST00000262188 PRNTQ86SH4 94 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms