RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 PHLDA3Q9Y5J5 127 aa11.05□□□□□ -0.64
SFSWAP-201ENST00000261674 RNASE4P34096 147 aaKnown RBP11.05□□□□□ -0.64
SFSWAP-201ENST00000261674 UBE2E1P51965 193 aa11.05□□□□□ -0.64
SFSWAP-201ENST00000261674 EMP1P54849 157 aa11.05□□□□□ -0.64
SFSWAP-201ENST00000261674 IGHV7-4-1A0A0J9YVY3 117 aa11.04□□□□□ -0.64
SFSWAP-201ENST00000261674 UNQ9165/PRO28630Q6UXU0 137 aa11.04□□□□□ -0.64
SFSWAP-201ENST00000261674 CNFNQ9BYD5 112 aa11.04□□□□□ -0.64
SFSWAP-201ENST00000261674 CYSLTR1Q9Y271 337 aa11.04□□□□□ -0.64
SFSWAP-201ENST00000261674 CENPVL3A0A0U1RRI6 287 aa11.03□□□□□ -0.64
SFSWAP-201ENST00000261674 ARL3P36405 182 aa11.03□□□□□ -0.64
SFSWAP-201ENST00000261674 C1orf122Q6ZSJ8 110 aa11.03□□□□□ -0.64
SFSWAP-201ENST00000261674 C20orf173Q96LM9 149 aa11.03□□□□□ -0.64
SFSWAP-201ENST00000261674 NPFFR1Q9GZQ6 430 aa11.03□□□□□ -0.64
SFSWAP-201ENST00000261674 CLEC2AQ6UVW9 174 aa11.03□□□□□ -0.64
SFSWAP-201ENST00000261674 NRACQ8N912 160 aa11.03□□□□□ -0.64
SFSWAP-201ENST00000261674 TEX48A0A1B0GUV7 120 aa11.03□□□□□ -0.64
SFSWAP-201ENST00000261674 RNF223E7ERA6 249 aa11.03□□□□□ -0.64
SFSWAP-201ENST00000261674 GNRH2O43555 120 aa11.03□□□□□ -0.64
SFSWAP-201ENST00000261674 CEND1Q8N111 149 aa11.03□□□□□ -0.64
SFSWAP-201ENST00000261674 NPFFO15130 113 aa11.02□□□□□ -0.64
SFSWAP-201ENST00000261674 ARL6IP6Q8N6S5 226 aa11.02□□□□□ -0.64
SFSWAP-201ENST00000261674 OR5A1Q8NGJ0 315 aa11.02□□□□□ -0.64
SFSWAP-201ENST00000261674 MXRA5Q9NR99 2828 aa11.02□□□□□ -0.65
SFSWAP-201ENST00000261674 IGLV2-18A0A075B6J9 118 aa11.02□□□□□ -0.65
SFSWAP-201ENST00000261674 TRAV41A0A0B4J266 112 aa11.02□□□□□ -0.65
SFSWAP-201ENST00000261674 H3BMG7 143 aa11.02□□□□□ -0.65
SFSWAP-201ENST00000261674 OR10J6PQ8NGY7 276 aa11.02□□□□□ -0.65
SFSWAP-201ENST00000261674 PF4V1P10720 104 aa11.01□□□□□ -0.65
SFSWAP-201ENST00000261674 NF1P21359 2839 aa11.01□□□□□ -0.65
SFSWAP-201ENST00000261674 OR11H12B2RN74 326 aa11.01□□□□□ -0.65
SFSWAP-201ENST00000261674 G3V4G9 280 aa11.01□□□□□ -0.65
SFSWAP-201ENST00000261674 OR11H1Q8NG94 326 aa11.01□□□□□ -0.65
SFSWAP-201ENST00000261674 OR11H2Q8NH07 326 aa11.01□□□□□ -0.65
SFSWAP-201ENST00000261674 ZNF479Q96JC4 524 aa11.01□□□□□ -0.65
SFSWAP-201ENST00000261674 C2CD3Q4AC94 2353 aa11.01□□□□□ -0.65
SFSWAP-201ENST00000261674 WFDC2Q14508 124 aa11.01□□□□□ -0.65
SFSWAP-201ENST00000261674 ANXA2RQ3ZCQ2 193 aa11.01□□□□□ -0.65
SFSWAP-201ENST00000261674 SMIM2Q9BVW6 85 aa11.01□□□□□ -0.65
SFSWAP-201ENST00000261674 ZMAT4Q9H898 229 aa11.01□□□□□ -0.65
SFSWAP-201ENST00000261674 SMPXQ9UHP9 88 aa11.01□□□□□ -0.65
SFSWAP-201ENST00000261674 A0A087WX48 190 aa11□□□□□ -0.65
SFSWAP-201ENST00000261674 TRBV7-1A0A0A6YYK4 115 aa11□□□□□ -0.65
SFSWAP-201ENST00000261674 RBAKDNA6NC62 111 aa11□□□□□ -0.65
SFSWAP-201ENST00000261674 F5H697 171 aa11□□□□□ -0.65
SFSWAP-201ENST00000261674 IGKV3-20P01619 116 aa11□□□□□ -0.65
SFSWAP-201ENST00000261674 SCGB1D4Q6XE38 83 aa11□□□□□ -0.65
SFSWAP-201ENST00000261674 CHTOPQ9Y3Y2 248 aaKnown RBP11□□□□□ -0.65
SFSWAP-201ENST00000261674 JMJD1CQ15652 2540 aa11□□□□□ -0.65
SFSWAP-201ENST00000261674 SH2D6Q7Z4S9 175 aa11□□□□□ -0.65
SFSWAP-201ENST00000261674 SPOCK3Q9BQ16 436 aa11□□□□□ -0.65
SFSWAP-201ENST00000261674 SUMO2P61956 95 aaKnown RBP10.99□□□□□ -0.65
SFSWAP-201ENST00000261674 SRSF2Q01130 221 aaKnown RBP10.99□□□□□ -0.65
SFSWAP-201ENST00000261674 AJUBAQ96IF1 538 aa10.99□□□□□ -0.65
SFSWAP-201ENST00000261674 TEP1Q99973 2627 aaKnown RBP10.99□□□□□ -0.65
SFSWAP-201ENST00000261674 ETDBQ3ZM63 59 aa10.99□□□□□ -0.65
SFSWAP-201ENST00000261674 CD300EQ496F6 205 aaPredicted RBP10.99□□□□□ -0.65
SFSWAP-201ENST00000261674 C9orf47Q6ZRZ4 202 aa10.99□□□□□ -0.65
SFSWAP-201ENST00000261674 C5orf56Q8N8D9 126 aa10.99□□□□□ -0.65
SFSWAP-201ENST00000261674 GTSF1LQ9H1H1 148 aa10.99□□□□□ -0.65
SFSWAP-201ENST00000261674 ASIPP42127 132 aa10.98□□□□□ -0.65
SFSWAP-201ENST00000261674 LMO4P61968 165 aa10.98□□□□□ -0.65
SFSWAP-201ENST00000261674 C12orf74Q32Q52 190 aa10.98□□□□□ -0.65
SFSWAP-201ENST00000261674 H7C1H1 209 aa10.98□□□□□ -0.65
SFSWAP-201ENST00000261674 SRSF9Q13242 221 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■□□□□ 9
SFSWAP-201ENST00000261674 HIGD1BQ9P298 99 aa10.98□□□□□ -0.65
SFSWAP-201ENST00000261674 NACAE9PAV3 2078 aa10.98□□□□□ -0.65
SFSWAP-201ENST00000261674 IGLL5B9A064 214 aa10.97□□□□□ -0.65
SFSWAP-201ENST00000261674 C2orf66Q6UXQ4 117 aa10.97□□□□□ -0.65
SFSWAP-201ENST00000261674 PIMREGQ9BSJ6 248 aa10.97□□□□□ -0.65
SFSWAP-201ENST00000261674 JPT2Q9H910 190 aa10.97□□□□□ -0.65
SFSWAP-201ENST00000261674 TRAV21A0A0B4J279 112 aa10.97□□□□□ -0.65
SFSWAP-201ENST00000261674 F8VRH5 84 aa10.97□□□□□ -0.65
SFSWAP-201ENST00000261674 FAM74A4Q5TZK3 123 aa10.97□□□□□ -0.65
SFSWAP-201ENST00000261674 KLHL30-AS1Q8NEE0 82 aa10.97□□□□□ -0.65
SFSWAP-201ENST00000261674 RASL10AQ92737 203 aa10.97□□□□□ -0.65
SFSWAP-201ENST00000261674 A0A087WWL8 130 aa10.97□□□□□ -0.65
SFSWAP-201ENST00000261674 PLNP26678 52 aa10.96□□□□□ -0.65
SFSWAP-201ENST00000261674 TGFAP01135 160 aa10.96□□□□□ -0.66
SFSWAP-201ENST00000261674 BLCAPP62952 87 aa10.96□□□□□ -0.66
SFSWAP-201ENST00000261674 C9orf139Q6ZV77 190 aa10.96□□□□□ -0.66
SFSWAP-201ENST00000261674 WFDC11Q8NEX6 87 aa10.96□□□□□ -0.66
SFSWAP-201ENST00000261674 PSMG3-AS1Q96PY0 264 aa10.96□□□□□ -0.66
SFSWAP-201ENST00000261674 SMAGPQ0VAQ4 97 aa10.96□□□□□ -0.66
SFSWAP-201ENST00000261674 ZFAND2AQ8N6M9 145 aa10.96□□□□□ -0.66
SFSWAP-201ENST00000261674 Q96MF0 132 aa10.96□□□□□ -0.66
SFSWAP-201ENST00000261674 DUX5Q96PT3 197 aa10.96□□□□□ -0.66
SFSWAP-201ENST00000261674 DPH3P1Q9H4G8 78 aa10.96□□□□□ -0.66
SFSWAP-201ENST00000261674 LOC107984156A0A0G2JMH3 177 aa10.95□□□□□ -0.66
SFSWAP-201ENST00000261674 PRSS29PA6NIE9 313 aa10.95□□□□□ -0.66
SFSWAP-201ENST00000261674 ZNF815PA8K554 130 aa10.95□□□□□ -0.66
SFSWAP-201ENST00000261674 APOMO95445 188 aa10.95□□□□□ -0.66
SFSWAP-201ENST00000261674 Q5PR19 223 aa10.95□□□□□ -0.66
SFSWAP-201ENST00000261674 ARL17AQ8IVW1 177 aa10.95□□□□□ -0.66
SFSWAP-201ENST00000261674 MOB4Q9Y3A3 225 aa10.95□□□□□ -0.66
SFSWAP-201ENST00000261674 EDN2P20800 178 aa10.95□□□□□ -0.66
SFSWAP-201ENST00000261674 ORMDL2Q53FV1 153 aa10.95□□□□□ -0.66
SFSWAP-201ENST00000261674 Q6ZS46 218 aa10.95□□□□□ -0.66
SFSWAP-201ENST00000261674 C10orf105Q8TEF2 133 aa10.95□□□□□ -0.66
SFSWAP-201ENST00000261674 PRADC1Q9BSG0 188 aa10.95□□□□□ -0.66
SFSWAP-201ENST00000261674 TM2D2Q9BX73 214 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms