RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 PSMG4Q5JS54 123 aa12.39□□□□□ -0.43
UBQLN1-201ENST00000257468 TRAV12-3A0A0B4J271 114 aa12.38□□□□□ -0.43
UBQLN1-201ENST00000257468 ID1P41134 155 aa12.38□□□□□ -0.43
UBQLN1-201ENST00000257468 SYNJ2BPP57105 145 aa12.38□□□□□ -0.43
UBQLN1-201ENST00000257468 GTSCR1Q86UQ5 136 aa12.38□□□□□ -0.43
UBQLN1-201ENST00000257468 JPT2Q9H910 190 aa12.38□□□□□ -0.43
UBQLN1-201ENST00000257468 MRPL35Q9NZE8 188 aaKnown RBP12.38□□□□□ -0.43
UBQLN1-201ENST00000257468 ZNF580Q9UK33 172 aa12.38□□□□□ -0.43
UBQLN1-201ENST00000257468 SUMO2P61956 95 aaKnown RBP12.37□□□□□ -0.43
UBQLN1-201ENST00000257468 MYOZ3Q8TDC0 251 aa12.37□□□□□ -0.43
UBQLN1-201ENST00000257468 BEX4Q9NWD9 120 aaPredicted RBP12.37□□□□□ -0.43
UBQLN1-201ENST00000257468 TMEM160Q9NX00 188 aa12.37□□□□□ -0.43
UBQLN1-201ENST00000257468 CR1P17927 2039 aa12.37□□□□□ -0.43
UBQLN1-201ENST00000257468 ABCA12Q86UK0 2595 aa12.37□□□□□ -0.43
UBQLN1-201ENST00000257468 DEFB104AQ8WTQ1 72 aa12.37□□□□□ -0.43
UBQLN1-201ENST00000257468 VPREB3Q9UKI3 123 aa12.37□□□□□ -0.43
UBQLN1-201ENST00000257468 PTPN13Q12923 2485 aa12.37□□□□□ -0.43
UBQLN1-201ENST00000257468 TRAV12-2A0A075B6T6 113 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 IGHV4OR15-8A0A075B7B6 117 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 A0A087WW49 117 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 J3QLI3 93 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 ATP5LO75964 103 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 ZC2HC1BQ5TFG8 222 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 ADAMTSL5Q6ZMM2 481 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 ZNF469Q96JG9 3925 aaPredicted RBP12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 TRBV7-9A0A0J9YWB2 115 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 DPM2O94777 84 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 IGHV4-31P0DP07 118 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 FAM159AQ6UWV7 190 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 NEGR1Q7Z3B1 354 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 AP1S3Q96PC3 154 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 AGRNO00468 2067 aa12.36□□□□□ -0.43
UBQLN1-201ENST00000257468 MED14OSP0DP75 135 aa12.35□□□□□ -0.43
UBQLN1-201ENST00000257468 OR9G4Q8NGQ1 327 aa12.35□□□□□ -0.43
UBQLN1-201ENST00000257468 ZNF702PQ9H963 129 aa12.35□□□□□ -0.43
UBQLN1-201ENST00000257468 TEX15Q9BXT5 2789 aa12.35□□□□□ -0.43
UBQLN1-201ENST00000257468 HOXA3O43365 443 aaPredicted RBP12.35□□□□□ -0.43
UBQLN1-201ENST00000257468 AMMECR1LQ6DCA0 310 aa12.35□□□□□ -0.43
UBQLN1-201ENST00000257468 TRAV8-6A0A0B4J262 113 aa12.34□□□□□ -0.43
UBQLN1-201ENST00000257468 CD7P09564 240 aa12.34□□□□□ -0.43
UBQLN1-201ENST00000257468 A0A087WWL8 130 aa12.34□□□□□ -0.43
UBQLN1-201ENST00000257468 FSHBP01225 129 aa12.34□□□□□ -0.43
UBQLN1-201ENST00000257468 Q6YL49 198 aa12.34□□□□□ -0.43
UBQLN1-201ENST00000257468 C18orf65Q6ZTR6 163 aa12.34□□□□□ -0.43
UBQLN1-201ENST00000257468 LGALS1P09382 135 aaKnown RBP12.33□□□□□ -0.44
UBQLN1-201ENST00000257468 HSD52Q0P140 79 aa12.33□□□□□ -0.44
UBQLN1-201ENST00000257468 KIF25-AS1Q9Y6Z4 181 aa12.33□□□□□ -0.44
UBQLN1-201ENST00000257468 A0A087WX48 190 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 A0A0J9YX75 114 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 NXPH4O95158 308 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 HOXD3P31249 432 aaPredicted RBP12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 LINC00315P59091 139 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 SEC11AP67812 179 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 DEFB136Q30KP8 78 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 OR4C5Q8NGB2 326 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 C20orf78Q9BR46 151 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 NAA38Q9BRA0 125 aaKnown RBP12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 K7EP13 123 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 K7EQG2 157 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 SIVA1O15304 175 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 HIST2H2BDQ6DRA6 164 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 SCGB3A1Q96QR1 104 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 CSTL1Q9H114 145 aa12.32□□□□□ -0.44
UBQLN1-201ENST00000257468 NBPF19A0A087WUL8 3843 aa12.31□□□□□ -0.44
UBQLN1-201ENST00000257468 SORL1Q92673 2214 aa12.31□□□□□ -0.44
UBQLN1-201ENST00000257468 TMEM89A2RUT3 159 aa12.31□□□□□ -0.44
UBQLN1-201ENST00000257468 SPINK13Q1W4C9 94 aa12.31□□□□□ -0.44
UBQLN1-201ENST00000257468 ORMDL2Q53FV1 153 aa12.31□□□□□ -0.44
UBQLN1-201ENST00000257468 TOMM6Q96B49 74 aa12.31□□□□□ -0.44
UBQLN1-201ENST00000257468 NAV2Q8IVL1 2488 aa12.31□□□□□ -0.44
UBQLN1-201ENST00000257468 SNRPD3P62318 126 aaKnown RBP12.31□□□□□ -0.44
UBQLN1-201ENST00000257468 Q5PR19 223 aa12.31□□□□□ -0.44
UBQLN1-201ENST00000257468 MDFICQ9P1T7 246 aa12.31□□□□□ -0.44
UBQLN1-201ENST00000257468 C2orf66Q6UXQ4 117 aa12.3□□□□□ -0.44
UBQLN1-201ENST00000257468 SUMO4Q6EEV6 95 aa12.3□□□□□ -0.44
UBQLN1-201ENST00000257468 MAPKAPK5-AS1Q8N8E1 139 aa12.3□□□□□ -0.44
UBQLN1-201ENST00000257468 FAM74A4Q5TZK3 123 aa12.29□□□□□ -0.44
UBQLN1-201ENST00000257468 SAMD13Q5VXD3 122 aa12.29□□□□□ -0.44
UBQLN1-201ENST00000257468 RAB37Q96AX2 223 aa12.29□□□□□ -0.44
UBQLN1-201ENST00000257468 TRBV25-1A0A075B6N4 114 aa12.28□□□□□ -0.44
UBQLN1-201ENST00000257468 ELANEP08246 267 aa12.28□□□□□ -0.44
UBQLN1-201ENST00000257468 SLURP1P55000 103 aa12.28□□□□□ -0.44
UBQLN1-201ENST00000257468 Q8N1Y9 231 aa12.28□□□□□ -0.44
UBQLN1-201ENST00000257468 POM121L12Q8N7R1 296 aa12.28□□□□□ -0.44
UBQLN1-201ENST00000257468 JMJD8Q96S16 334 aa12.28□□□□□ -0.44
UBQLN1-201ENST00000257468 CHAC1Q9BUX1 264 aa12.28□□□□□ -0.44
UBQLN1-201ENST00000257468 IGHV3-16A0A0C4DH30 117 aa12.28□□□□□ -0.44
UBQLN1-201ENST00000257468 A6NDN8 102 aa12.28□□□□□ -0.44
UBQLN1-201ENST00000257468 F5H697 171 aa12.28□□□□□ -0.44
UBQLN1-201ENST00000257468 RNASE8Q8TDE3 154 aaKnown RBP12.28□□□□□ -0.44
UBQLN1-201ENST00000257468 UBE2E2Q96LR5 201 aa12.28□□□□□ -0.44
UBQLN1-201ENST00000257468 DUX3Q96PT4 197 aa12.28□□□□□ -0.44
UBQLN1-201ENST00000257468 DEFB113Q30KQ7 82 aa12.27□□□□□ -0.44
UBQLN1-201ENST00000257468 NEXN-AS1Q8NBZ9 246 aa12.27□□□□□ -0.44
UBQLN1-201ENST00000257468 Q96MF0 132 aa12.27□□□□□ -0.44
UBQLN1-201ENST00000257468 F8VRH5 84 aa12.27□□□□□ -0.45
UBQLN1-201ENST00000257468 H7C1H1 209 aa12.27□□□□□ -0.45
UBQLN1-201ENST00000257468 K7EMI3 77 aa12.27□□□□□ -0.45
UBQLN1-201ENST00000257468 LGALS9O00182 355 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms