RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 IGKV2-40A0A087WW87 121 aaPredicted RBP8.75□□□□□ -1.01
PDE6B-201ENST00000255622 A0A0U1RRA0 63 aa8.75□□□□□ -1.01
PDE6B-201ENST00000255622 A0A1B0GUT8 65 aa8.75□□□□□ -1.01
PDE6B-201ENST00000255622 RBAKDNA6NC62 111 aa8.75□□□□□ -1.01
PDE6B-201ENST00000255622 IGKV2D-40P01614 121 aaPredicted RBP8.75□□□□□ -1.01
PDE6B-201ENST00000255622 VMO1Q7Z5L0 202 aa8.75□□□□□ -1.01
PDE6B-201ENST00000255622 ANKRD29Q8N6D5 301 aa8.75□□□□□ -1.01
PDE6B-201ENST00000255622 ZFP36P26651 326 aaKnown RBP8.74□□□□□ -1.01
PDE6B-201ENST00000255622 FBXL19-AS1Q494R0 122 aa8.74□□□□□ -1.01
PDE6B-201ENST00000255622 TMEM219Q86XT9 240 aa8.74□□□□□ -1.01
PDE6B-201ENST00000255622 WFDC3Q8IUB2 231 aa8.74□□□□□ -1.01
PDE6B-201ENST00000255622 CEND1Q8N111 149 aa8.74□□□□□ -1.01
PDE6B-201ENST00000255622 CHCHD1Q96BP2 118 aaKnown RBP8.74□□□□□ -1.01
PDE6B-201ENST00000255622 HIST1H4GQ99525 98 aa8.74□□□□□ -1.01
PDE6B-201ENST00000255622 PRO0628Q9UI54 55 aa8.74□□□□□ -1.01
PDE6B-201ENST00000255622 HLA-DMBP28068 263 aa8.74□□□□□ -1.01
PDE6B-201ENST00000255622 Q8TAT8 98 aa8.74□□□□□ -1.01
PDE6B-201ENST00000255622 A0A1W2PPR1 153 aa8.73□□□□□ -1.01
PDE6B-201ENST00000255622 DUSP14O95147 198 aaKnown RBP8.73□□□□□ -1.01
PDE6B-201ENST00000255622 JPT2Q9H910 190 aa8.73□□□□□ -1.01
PDE6B-201ENST00000255622 RETNQ9HD89 108 aa8.73□□□□□ -1.01
PDE6B-201ENST00000255622 C11orf71Q6IPW1 123 aa8.73□□□□□ -1.01
PDE6B-201ENST00000255622 ZFP2Q6ZN57 461 aa8.73□□□□□ -1.01
PDE6B-201ENST00000255622 TRBV6-1A0A0K0K1D8 114 aa8.72□□□□□ -1.01
PDE6B-201ENST00000255622 MALP21145 153 aa8.72□□□□□ -1.01
PDE6B-201ENST00000255622 DSCR8Q96T75 97 aa8.72□□□□□ -1.01
PDE6B-201ENST00000255622 TRAV2A0A0B4J234 112 aa8.72□□□□□ -1.01
PDE6B-201ENST00000255622 LOC389332A0A1B0GUA5 103 aa8.72□□□□□ -1.01
PDE6B-201ENST00000255622 M0R1W7 72 aa8.72□□□□□ -1.01
PDE6B-201ENST00000255622 SCGB1C2P0DMR2 95 aa8.72□□□□□ -1.01
PDE6B-201ENST00000255622 LOXL1Q08397 574 aaPredicted RBP8.72□□□□□ -1.01
PDE6B-201ENST00000255622 LYZL1Q6UWQ5 148 aa8.72□□□□□ -1.01
PDE6B-201ENST00000255622 LYPD1Q8N2G4 141 aa8.72□□□□□ -1.01
PDE6B-201ENST00000255622 AAMDCQ9H7C9 122 aa8.72□□□□□ -1.01
PDE6B-201ENST00000255622 A0A1B0GX51 115 aa8.71□□□□□ -1.01
PDE6B-201ENST00000255622 SH2D1AO60880 128 aa8.71□□□□□ -1.01
PDE6B-201ENST00000255622 EGR2P11161 476 aaPredicted RBP8.71□□□□□ -1.01
PDE6B-201ENST00000255622 ZNF493Q6ZR52 646 aa8.71□□□□□ -1.01
PDE6B-201ENST00000255622 LINC00336Q6ZUF6 198 aa8.71□□□□□ -1.01
PDE6B-201ENST00000255622 PRSS3P2Q8NHM4 247 aa8.71□□□□□ -1.01
PDE6B-201ENST00000255622 ZNF747Q9BV97 191 aa8.71□□□□□ -1.01
PDE6B-201ENST00000255622 RIGQ13278 110 aa8.71□□□□□ -1.02
PDE6B-201ENST00000255622 PMVKQ15126 192 aa8.71□□□□□ -1.02
PDE6B-201ENST00000255622 SMAD5-AS1Q9Y6J3 95 aa8.71□□□□□ -1.02
PDE6B-201ENST00000255622 CTSGP08311 255 aa8.71□□□□□ -1.02
PDE6B-201ENST00000255622 ZNF56Q15929 161 aa8.71□□□□□ -1.02
PDE6B-201ENST00000255622 C1orf195Q5TG92 126 aa8.71□□□□□ -1.02
PDE6B-201ENST00000255622 AMN1Q8IY45 258 aa8.71□□□□□ -1.02
PDE6B-201ENST00000255622 C3orf22Q8N5N4 141 aa8.71□□□□□ -1.02
PDE6B-201ENST00000255622 CELSR2Q9HCU4 2923 aa8.7□□□□□ -1.02
PDE6B-201ENST00000255622 IGHV7-81A0A0B4J1V7 117 aa8.7□□□□□ -1.02
PDE6B-201ENST00000255622 D6R8Y8 96 aa8.7□□□□□ -1.02
PDE6B-201ENST00000255622 IFI27P40305 119 aaPredicted RBP8.7□□□□□ -1.02
PDE6B-201ENST00000255622 ZNF80P51504 273 aaPredicted RBP8.7□□□□□ -1.02
PDE6B-201ENST00000255622 ZNF256Q9Y2P7 627 aaPredicted RBP8.7□□□□□ -1.02
PDE6B-201ENST00000255622 HIVEP3Q5T1R4 2406 aa8.7□□□□□ -1.02
PDE6B-201ENST00000255622 TRBV25-1A0A075B6N4 114 aa8.7□□□□□ -1.02
PDE6B-201ENST00000255622 IGHV3-66A0A0C4DH42 116 aa8.7□□□□□ -1.02
PDE6B-201ENST00000255622 Q8N6K4 173 aa8.7□□□□□ -1.02
PDE6B-201ENST00000255622 TRGV11A0A075B6L2 103 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 IGHG4P01861 327 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 ASIPP42127 132 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 IGHV3OR16-13A0A075B7E8 117 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 IGHV3-74A0A0B4J1X5 117 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 TRAV8-4A0A0B4J246 113 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 SMKR1H3BMG3 65 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 ECSCRQ19T08 205 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 Q6Q795 121 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 RNF152Q8N8N0 203 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 CSMD2Q7Z408 3487 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.69□□□□□ -1.02
PDE6B-201ENST00000255622 IGKV2D-26A0A0A0MRZ7 120 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 HOXA3O43365 443 aaPredicted RBP8.69□□□□□ -1.02
PDE6B-201ENST00000255622 KLRB1Q12918 225 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 PDE6HQ13956 83 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 ZNRF2Q8NHG8 242 aa8.69□□□□□ -1.02
PDE6B-201ENST00000255622 RNF182Q8N6D2 247 aa8.68□□□□□ -1.02
PDE6B-201ENST00000255622 Q8N9W7 124 aa8.68□□□□□ -1.02
PDE6B-201ENST00000255622 C2orf48Q96LS8 159 aa8.68□□□□□ -1.02
PDE6B-201ENST00000255622 PRR25Q96S07 402 aa8.68□□□□□ -1.02
PDE6B-201ENST00000255622 HIGD1BQ9P298 99 aa8.68□□□□□ -1.02
PDE6B-201ENST00000255622 ERCC8Q13216 396 aa8.68□□□□□ -1.02
PDE6B-201ENST00000255622 WFDC11Q8NEX6 87 aa8.68□□□□□ -1.02
PDE6B-201ENST00000255622 ZFYVE26Q68DK2 2539 aa8.68□□□□□ -1.02
PDE6B-201ENST00000255622 A0A096LNJ9 63 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 hADV29S1A0JD25 119 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 LINC01549A6NIU2 74 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 C15orf32Q32M92 178 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 PIEZO1Q92508 2521 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 IGHV3-49A0A0A0MS15 119 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 PRAC2D3DTV9 90 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 GTSCR1Q86UQ5 136 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 ZNF575Q86XF7 245 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 DKK2Q9UBU2 259 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 CRYBG3Q68DQ2 2970 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 CENPEQ02224 2701 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 G3V318 75 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 HERVK_113P61574 105 aa8.67□□□□□ -1.02
PDE6B-201ENST00000255622 CEMP1Q6PRD7 247 aaPredicted RBP8.67□□□□□ -1.02
PDE6B-201ENST00000255622 MSRB1Q9NZV6 116 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms