RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 KRTAP10-9P60411 292 aa11.92□□□□□ -0.5
RFX1-201ENST00000254325 COX8CQ7Z4L0 72 aa11.92□□□□□ -0.5
RFX1-201ENST00000254325 GTSCR1Q86UQ5 136 aa11.92□□□□□ -0.5
RFX1-201ENST00000254325 OR11H1Q8NG94 326 aa11.92□□□□□ -0.5
RFX1-201ENST00000254325 CSTL1Q9H114 145 aa11.92□□□□□ -0.5
RFX1-201ENST00000254325 PRR9Q5T870 116 aa11.91□□□□□ -0.5
RFX1-201ENST00000254325 KIR3DS1Q14943 382 aa11.91□□□□□ -0.5
RFX1-201ENST00000254325 SMIM2Q9BVW6 85 aa11.91□□□□□ -0.5
RFX1-201ENST00000254325 WNK1Q9H4A3 2382 aa11.9□□□□□ -0.5
RFX1-201ENST00000254325 ZFAND2AQ8N6M9 145 aa11.9□□□□□ -0.5
RFX1-201ENST00000254325 GATD1Q8NB37 220 aa11.9□□□□□ -0.5
RFX1-201ENST00000254325 U3KQK5 164 aa11.9□□□□□ -0.5
RFX1-201ENST00000254325 RNF185Q96GF1 192 aa11.9□□□□□ -0.5
RFX1-201ENST00000254325 ZZEF1O43149 2961 aa11.9□□□□□ -0.51
RFX1-201ENST00000254325 COX8AP10176 69 aa11.9□□□□□ -0.51
RFX1-201ENST00000254325 PSMB8P28062 276 aa11.9□□□□□ -0.51
RFX1-201ENST00000254325 SLURP1P55000 103 aa11.9□□□□□ -0.51
RFX1-201ENST00000254325 ZC2HC1BQ5TFG8 222 aa11.9□□□□□ -0.51
RFX1-201ENST00000254325 SCGB1D4Q6XE38 83 aa11.9□□□□□ -0.51
RFX1-201ENST00000254325 OR1N2Q8NGR9 330 aa11.9□□□□□ -0.51
RFX1-201ENST00000254325 CDKN1BP46527 198 aa11.89□□□□□ -0.51
RFX1-201ENST00000254325 TP73-AS1Q9UF72 201 aa11.89□□□□□ -0.51
RFX1-201ENST00000254325 LINC01619G3V211 115 aa11.89□□□□□ -0.51
RFX1-201ENST00000254325 UBE2E2Q96LR5 201 aa11.89□□□□□ -0.51
RFX1-201ENST00000254325 TMEM89A2RUT3 159 aa11.89□□□□□ -0.51
RFX1-201ENST00000254325 CRXO43186 299 aaPredicted RBP11.89□□□□□ -0.51
RFX1-201ENST00000254325 GAS8-AS1O95177 125 aa11.89□□□□□ -0.51
RFX1-201ENST00000254325 CYSLTR1Q9Y271 337 aa11.89□□□□□ -0.51
RFX1-201ENST00000254325 EDN2P20800 178 aa11.88□□□□□ -0.51
RFX1-201ENST00000254325 Q6YL49 198 aa11.88□□□□□ -0.51
RFX1-201ENST00000254325 KNCNA6PVL3 124 aa11.88□□□□□ -0.51
RFX1-201ENST00000254325 OR11H12B2RN74 326 aa11.88□□□□□ -0.51
RFX1-201ENST00000254325 ANKRD39Q53RE8 183 aa11.88□□□□□ -0.51
RFX1-201ENST00000254325 NEGR1Q7Z3B1 354 aa11.88□□□□□ -0.51
RFX1-201ENST00000254325 OR11H2Q8NH07 326 aa11.88□□□□□ -0.51
RFX1-201ENST00000254325 LINC01587Q99440 93 aa11.88□□□□□ -0.51
RFX1-201ENST00000254325 TRGV11A0A075B6L2 103 aa11.88□□□□□ -0.51
RFX1-201ENST00000254325 CIDEAO60543 219 aa11.88□□□□□ -0.51
RFX1-201ENST00000254325 RPL39LQ96EH5 51 aaKnown RBP11.88□□□□□ -0.51
RFX1-201ENST00000254325 HERVK_113P61574 105 aa11.87□□□□□ -0.51
RFX1-201ENST00000254325 CHTOPQ9Y3Y2 248 aaKnown RBP11.87□□□□□ -0.51
RFX1-201ENST00000254325 IGHV1OR15-1A0A075B7D0 117 aa11.87□□□□□ -0.51
RFX1-201ENST00000254325 ZNF876PQ49A33 203 aa11.86□□□□□ -0.51
RFX1-201ENST00000254325 C19orf54Q5BKX5 351 aa11.86□□□□□ -0.51
RFX1-201ENST00000254325 Q6ZVH6 145 aa11.86□□□□□ -0.51
RFX1-201ENST00000254325 OR9G4Q8NGQ1 327 aa11.86□□□□□ -0.51
RFX1-201ENST00000254325 SCRT2Q9NQ03 307 aa11.86□□□□□ -0.51
RFX1-201ENST00000254325 CNFNQ9BYD5 112 aa11.86□□□□□ -0.51
RFX1-201ENST00000254325 ABCA2Q9BZC7 2435 aa11.86□□□□□ -0.51
RFX1-201ENST00000254325 SETD2Q9BYW2 2564 aaPredicted RBP11.85□□□□□ -0.51
RFX1-201ENST00000254325 C2orf66Q6UXQ4 117 aa11.85□□□□□ -0.51
RFX1-201ENST00000254325 MRPL35Q9NZE8 188 aaKnown RBP11.85□□□□□ -0.51
RFX1-201ENST00000254325 IGHV3-73A0A0B4J1V6 119 aa11.85□□□□□ -0.51
RFX1-201ENST00000254325 CD5LO43866 347 aa11.85□□□□□ -0.51
RFX1-201ENST00000254325 SCGB1C2P0DMR2 95 aa11.85□□□□□ -0.51
RFX1-201ENST00000254325 KLK9Q2XQG4 91 aa11.85□□□□□ -0.51
RFX1-201ENST00000254325 RELNP78509 3460 aa11.85□□□□□ -0.51
RFX1-201ENST00000254325 ORAOV1Q8WV07 137 aa11.85□□□□□ -0.51
RFX1-201ENST00000254325 HIST1H4GQ99525 98 aa11.85□□□□□ -0.51
RFX1-201ENST00000254325 H7C1H1 209 aa11.84□□□□□ -0.51
RFX1-201ENST00000254325 VCYO14598 125 aa11.84□□□□□ -0.51
RFX1-201ENST00000254325 C20orf78Q9BR46 151 aa11.84□□□□□ -0.51
RFX1-201ENST00000254325 HSD52Q0P140 79 aa11.84□□□□□ -0.51
RFX1-201ENST00000254325 BRI3O95415 125 aa11.84□□□□□ -0.51
RFX1-201ENST00000254325 SRSF9Q13242 221 aaKnown RBP eCLIP11.84□□□□□ -0.51
RFX1-201ENST00000254325 COX11Q9Y6N1 276 aa11.84□□□□□ -0.51
RFX1-201ENST00000254325 FOXI2Q6ZQN5 318 aa11.83□□□□□ -0.52
RFX1-201ENST00000254325 TMEM170BQ5T4T1 132 aa11.83□□□□□ -0.52
RFX1-201ENST00000254325 A0A0J9YX75 114 aa11.83□□□□□ -0.52
RFX1-201ENST00000254325 BVES-AS1Q5T3Y7 98 aa11.83□□□□□ -0.52
RFX1-201ENST00000254325 HIST2H2BCQ6DN03 193 aa11.83□□□□□ -0.52
RFX1-201ENST00000254325 LRRC75A-AS1Q8N1F1 130 aa11.83□□□□□ -0.52
RFX1-201ENST00000254325 ZNF702PQ9H963 129 aa11.83□□□□□ -0.52
RFX1-201ENST00000254325 IGSF10Q6WRI0 2623 aa11.83□□□□□ -0.52
RFX1-201ENST00000254325 TRBV7-9A0A0J9YWB2 115 aa11.82□□□□□ -0.52
RFX1-201ENST00000254325 PLNP26678 52 aa11.82□□□□□ -0.52
RFX1-201ENST00000254325 ZNF418Q8TF45 676 aaPredicted RBP11.82□□□□□ -0.52
RFX1-201ENST00000254325 TNFRSF18Q9Y5U5 241 aa11.82□□□□□ -0.52
RFX1-201ENST00000254325 SEC11AP67812 179 aa11.82□□□□□ -0.52
RFX1-201ENST00000254325 PCP2Q8IVA1 136 aa11.82□□□□□ -0.52
RFX1-201ENST00000254325 STHQ8IWL8 128 aa11.82□□□□□ -0.52
RFX1-201ENST00000254325 FABP2P12104 132 aa11.82□□□□□ -0.52
RFX1-201ENST00000254325 WFDC11Q8NEX6 87 aa11.82□□□□□ -0.52
RFX1-201ENST00000254325 JPT2Q9H910 190 aa11.82□□□□□ -0.52
RFX1-201ENST00000254325 SDHAF1A6NFY7 115 aa11.82□□□□□ -0.52
RFX1-201ENST00000254325 SOCS3O14543 225 aa11.81□□□□□ -0.52
RFX1-201ENST00000254325 HRNRQ86YZ3 2850 aaPredicted RBP11.81□□□□□ -0.52
RFX1-201ENST00000254325 K7EQG2 157 aa11.81□□□□□ -0.52
RFX1-201ENST00000254325 MED14OSP0DP75 135 aa11.81□□□□□ -0.52
RFX1-201ENST00000254325 RIPPLY3P57055 190 aa11.81□□□□□ -0.52
RFX1-201ENST00000254325 DGAT2L7PQ6IED9 249 aa11.81□□□□□ -0.52
RFX1-201ENST00000254325 J3QKU1 62 aa11.81□□□□□ -0.52
RFX1-201ENST00000254325 TP53TG1Q9Y2A0 90 aa11.81□□□□□ -0.52
RFX1-201ENST00000254325 Q8N1Y9 231 aa11.8□□□□□ -0.52
RFX1-201ENST00000254325 DCANP1Q8TF63 244 aa11.8□□□□□ -0.52
RFX1-201ENST00000254325 JMJD8Q96S16 334 aa11.8□□□□□ -0.52
RFX1-201ENST00000254325 EMP1P54849 157 aa11.8□□□□□ -0.52
RFX1-201ENST00000254325 CD300EQ496F6 205 aaPredicted RBP11.8□□□□□ -0.52
RFX1-201ENST00000254325 NAA38Q9BRA0 125 aaKnown RBP11.8□□□□□ -0.52
RFX1-201ENST00000254325 MDFICQ9P1T7 246 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms