RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 PROK1P58294 105 aa8.69□□□□□ -1.02
LIN28A-201ENST00000254231 HBBP68871 147 aa8.69□□□□□ -1.02
LIN28A-201ENST00000254231 RCHY1Q96PM5 261 aa8.69□□□□□ -1.02
LIN28A-201ENST00000254231 TMEM242Q9NWH2 141 aa8.69□□□□□ -1.02
LIN28A-201ENST00000254231 SNAI2O43623 268 aa8.69□□□□□ -1.02
LIN28A-201ENST00000254231 VAMP3Q15836 100 aa8.69□□□□□ -1.02
LIN28A-201ENST00000254231 DEFB135Q30KP9 77 aa8.69□□□□□ -1.02
LIN28A-201ENST00000254231 TMEM136Q6ZRR5 245 aa8.69□□□□□ -1.02
LIN28A-201ENST00000254231 IGHV3-38A0A0C4DH36 116 aa8.68□□□□□ -1.02
LIN28A-201ENST00000254231 OR4C46A6NHA9 309 aa8.68□□□□□ -1.02
LIN28A-201ENST00000254231 D6R8Y8 96 aa8.68□□□□□ -1.02
LIN28A-201ENST00000254231 ZNF56Q15929 161 aa8.68□□□□□ -1.02
LIN28A-201ENST00000254231 LYPD1Q8N2G4 141 aa8.68□□□□□ -1.02
LIN28A-201ENST00000254231 SMIM17P0DL12 118 aa8.68□□□□□ -1.02
LIN28A-201ENST00000254231 SMIM15Q7Z3B0 74 aa8.68□□□□□ -1.02
LIN28A-201ENST00000254231 PTTG1IPP53801 180 aa8.68□□□□□ -1.02
LIN28A-201ENST00000254231 NUTF2P61970 127 aaKnown RBP8.68□□□□□ -1.02
LIN28A-201ENST00000254231 MLST8Q9BVC4 326 aa8.68□□□□□ -1.02
LIN28A-201ENST00000254231 MRPL16Q9NX20 251 aaKnown RBP8.67□□□□□ -1.02
LIN28A-201ENST00000254231 NPSP0C0P6 89 aa8.67□□□□□ -1.02
LIN28A-201ENST00000254231 RIGQ13278 110 aa8.67□□□□□ -1.02
LIN28A-201ENST00000254231 Q6ZWC4 215 aa8.67□□□□□ -1.02
LIN28A-201ENST00000254231 PHLDA1Q8WV24 401 aaPredicted RBP8.67□□□□□ -1.02
LIN28A-201ENST00000254231 TRGV1A0A0A0MS02 117 aa8.67□□□□□ -1.02
LIN28A-201ENST00000254231 MAP6D1Q9H9H5 199 aa8.67□□□□□ -1.02
LIN28A-201ENST00000254231 TRAV21A0A0B4J279 112 aa8.66□□□□□ -1.02
LIN28A-201ENST00000254231 BTF3P20290 206 aaKnown RBP8.66□□□□□ -1.02
LIN28A-201ENST00000254231 ASIPP42127 132 aa8.66□□□□□ -1.02
LIN28A-201ENST00000254231 MAJINQ3KP22 176 aa8.66□□□□□ -1.02
LIN28A-201ENST00000254231 ZNF876PQ49A33 203 aa8.66□□□□□ -1.02
LIN28A-201ENST00000254231 Q8N1Y9 231 aa8.66□□□□□ -1.02
LIN28A-201ENST00000254231 KLF12Q9Y4X4 402 aa8.66□□□□□ -1.02
LIN28A-201ENST00000254231 K7EQG2 157 aa8.66□□□□□ -1.02
LIN28A-201ENST00000254231 CDKN1BP46527 198 aa8.66□□□□□ -1.02
LIN28A-201ENST00000254231 FOXL1Q12952 345 aa8.66□□□□□ -1.02
LIN28A-201ENST00000254231 P0DMU3 169 aa8.66□□□□□ -1.02
LIN28A-201ENST00000254231 FAM231AP0DMU4 169 aa8.66□□□□□ -1.02
LIN28A-201ENST00000254231 FAM231CP0DMU5 169 aa8.66□□□□□ -1.02
LIN28A-201ENST00000254231 TMEM86BQ8N661 226 aa8.65□□□□□ -1.02
LIN28A-201ENST00000254231 U3KQE9 123 aa8.65□□□□□ -1.02
LIN28A-201ENST00000254231 TRGV2A0A075B6R0 118 aa8.65□□□□□ -1.03
LIN28A-201ENST00000254231 CRIP2P52943 208 aaPredicted RBP8.65□□□□□ -1.03
LIN28A-201ENST00000254231 A0A0J9YX75 114 aa8.64□□□□□ -1.03
LIN28A-201ENST00000254231 ODF3L2Q3SX64 289 aa8.64□□□□□ -1.03
LIN28A-201ENST00000254231 RETNQ9HD89 108 aa8.64□□□□□ -1.03
LIN28A-201ENST00000254231 GAGE12BA1L429 117 aa8.64□□□□□ -1.03
LIN28A-201ENST00000254231 GAGE7O76087 117 aa8.64□□□□□ -1.03
LIN28A-201ENST00000254231 GAGE12FP0CL80 117 aa8.64□□□□□ -1.03
LIN28A-201ENST00000254231 GAGE12GP0CL81 117 aa8.64□□□□□ -1.03
LIN28A-201ENST00000254231 GAGE12IP0CL82 117 aa8.64□□□□□ -1.03
LIN28A-201ENST00000254231 GTSCR1Q86UQ5 136 aa8.64□□□□□ -1.03
LIN28A-201ENST00000254231 PRIMA1Q86XR5 153 aa8.64□□□□□ -1.03
LIN28A-201ENST00000254231 ZFAND2AQ8N6M9 145 aa8.64□□□□□ -1.03
LIN28A-201ENST00000254231 RNASE13Q5GAN3 156 aaKnown RBP8.64□□□□□ -1.03
LIN28A-201ENST00000254231 FA2HQ7L5A8 372 aa8.64□□□□□ -1.03
LIN28A-201ENST00000254231 C2orf88Q9BSF0 95 aa8.64□□□□□ -1.03
LIN28A-201ENST00000254231 C20orf202A1L168 122 aa8.63□□□□□ -1.03
LIN28A-201ENST00000254231 AZU1P20160 251 aa8.63□□□□□ -1.03
LIN28A-201ENST00000254231 SMIM27A0A1W2PRY6 76 aa8.63□□□□□ -1.03
LIN28A-201ENST00000254231 C19orf71A6NCJ1 209 aa8.63□□□□□ -1.03
LIN28A-201ENST00000254231 HSBP1L1C9JCN9 74 aa8.63□□□□□ -1.03
LIN28A-201ENST00000254231 K7EMT4 169 aa8.63□□□□□ -1.03
LIN28A-201ENST00000254231 IFI27P40305 119 aaPredicted RBP8.63□□□□□ -1.03
LIN28A-201ENST00000254231 PRELID3AQ96N28 172 aa8.63□□□□□ -1.03
LIN28A-201ENST00000254231 TP73-AS1Q9UF72 201 aa8.63□□□□□ -1.03
LIN28A-201ENST00000254231 NOP10Q9NPE3 64 aaKnown RBP8.63□□□□□ -1.03
LIN28A-201ENST00000254231 A0A0J9YY99 117 aa8.62□□□□□ -1.03
LIN28A-201ENST00000254231 C7orf71A4D174 169 aa8.62□□□□□ -1.03
LIN28A-201ENST00000254231 RPL39LQ96EH5 51 aaKnown RBP8.62□□□□□ -1.03
LIN28A-201ENST00000254231 HLA-DQA1P01909 254 aa8.62□□□□□ -1.03
LIN28A-201ENST00000254231 COL5A1-AS1Q5SY13 56 aa8.62□□□□□ -1.03
LIN28A-201ENST00000254231 WDR73Q6P4I2 378 aa8.61□□□□□ -1.03
LIN28A-201ENST00000254231 KCNS1Q96KK3 526 aa8.61□□□□□ -1.03
LIN28A-201ENST00000254231 MIEN1Q9BRT3 115 aa8.61□□□□□ -1.03
LIN28A-201ENST00000254231 G3V4G9 280 aa8.61□□□□□ -1.03
LIN28A-201ENST00000254231 H3BMM0 161 aa8.61□□□□□ -1.03
LIN28A-201ENST00000254231 PCP4P48539 62 aa8.61□□□□□ -1.03
LIN28A-201ENST00000254231 RRN3P1Q2M238 152 aa8.61□□□□□ -1.03
LIN28A-201ENST00000254231 LINC00173Q6ZV60 143 aa8.61□□□□□ -1.03
LIN28A-201ENST00000254231 OR4C5Q8NGB2 326 aa8.61□□□□□ -1.03
LIN28A-201ENST00000254231 MDFIQ99750 246 aa8.61□□□□□ -1.03
LIN28A-201ENST00000254231 TYMSP04818 313 aa8.61□□□□□ -1.03
LIN28A-201ENST00000254231 NIT1Q86X76 327 aa8.61□□□□□ -1.03
LIN28A-201ENST00000254231 RBMY1BA6NDE4 496 aaKnown RBP8.6□□□□□ -1.03
LIN28A-201ENST00000254231 RBMY1EA6NEQ0 496 aaKnown RBP8.6□□□□□ -1.03
LIN28A-201ENST00000254231 RBMY1DP0C7P1 496 aaKnown RBP8.6□□□□□ -1.03
LIN28A-201ENST00000254231 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
LIN28A-201ENST00000254231 TSPOP30536 169 aa8.6□□□□□ -1.03
LIN28A-201ENST00000254231 VPS25Q9BRG1 176 aa8.6□□□□□ -1.03
LIN28A-201ENST00000254231 Q9UF83 564 aa8.6□□□□□ -1.03
LIN28A-201ENST00000254231 NPYP01303 97 aa8.6□□□□□ -1.03
LIN28A-201ENST00000254231 C9orf47Q6ZRZ4 202 aa8.6□□□□□ -1.03
LIN28A-201ENST00000254231 SOCS3O14543 225 aa8.6□□□□□ -1.03
LIN28A-201ENST00000254231 RBMY1A1P0DJD3 496 aaKnown RBP8.6□□□□□ -1.03
LIN28A-201ENST00000254231 RBMY1CP0DJD4 496 aa8.6□□□□□ -1.03
LIN28A-201ENST00000254231 RBMY1FQ15415 496 aaKnown RBP8.6□□□□□ -1.03
LIN28A-201ENST00000254231 Q8N2B8 174 aa8.6□□□□□ -1.03
LIN28A-201ENST00000254231 AP1S3Q96PC3 154 aa8.6□□□□□ -1.03
LIN28A-201ENST00000254231 PYGO2Q9BRQ0 406 aa8.6□□□□□ -1.03
LIN28A-201ENST00000254231 MRPL51Q4U2R6 128 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms