RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 LINC01549A6NIU2 74 aa14.36□□□□□ -0.11
SNX4-201ENST00000251775 FHL3Q13643 280 aa14.36□□□□□ -0.11
SNX4-201ENST00000251775 MOB4Q9Y3A3 225 aa14.36□□□□□ -0.11
SNX4-201ENST00000251775 TRAV26-1A0A087WT03 109 aa14.36□□□□□ -0.11
SNX4-201ENST00000251775 IGHV1-69DA0A0B4J2H0 117 aa14.36□□□□□ -0.11
SNX4-201ENST00000251775 H3BVH4 76 aa14.36□□□□□ -0.11
SNX4-201ENST00000251775 IGHV1-69P01742 117 aa14.36□□□□□ -0.11
SNX4-201ENST00000251775 ORMDL2Q53FV1 153 aa14.36□□□□□ -0.11
SNX4-201ENST00000251775 C19orf54Q5BKX5 351 aa14.36□□□□□ -0.11
SNX4-201ENST00000251775 SVIPQ8NHG7 77 aa14.36□□□□□ -0.11
SNX4-201ENST00000251775 WFDC12Q8WWY7 111 aa14.36□□□□□ -0.11
SNX4-201ENST00000251775 TRAV41A0A0B4J266 112 aa14.35□□□□□ -0.11
SNX4-201ENST00000251775 UBE2D1P51668 147 aa14.35□□□□□ -0.11
SNX4-201ENST00000251775 SPTAN1Q13813 2472 aaKnown RBP14.35□□□□□ -0.11
SNX4-201ENST00000251775 SLC25A16P16260 332 aa14.35□□□□□ -0.11
SNX4-201ENST00000251775 BAALCQ8WXS3 180 aa14.35□□□□□ -0.11
SNX4-201ENST00000251775 PLEKHB2Q96CS7 222 aa14.35□□□□□ -0.11
SNX4-201ENST00000251775 METTL26Q96S19 204 aa14.35□□□□□ -0.11
SNX4-201ENST00000251775 TSPAN13O95857 204 aa14.34□□□□□ -0.11
SNX4-201ENST00000251775 SUMO2P61956 95 aaKnown RBP14.34□□□□□ -0.11
SNX4-201ENST00000251775 SCGB2A2Q13296 93 aa14.34□□□□□ -0.11
SNX4-201ENST00000251775 RASL10AQ92737 203 aa14.34□□□□□ -0.11
SNX4-201ENST00000251775 GEMIN7Q9H840 131 aaKnown RBP14.34□□□□□ -0.11
SNX4-201ENST00000251775 ZNF815PA8K554 130 aa14.34□□□□□ -0.11
SNX4-201ENST00000251775 SFTA2Q6UW10 78 aa14.34□□□□□ -0.11
SNX4-201ENST00000251775 ZFP2Q6ZN57 461 aa14.34□□□□□ -0.11
SNX4-201ENST00000251775 U3KQE9 123 aa14.34□□□□□ -0.11
SNX4-201ENST00000251775 PSMB2P49721 201 aa14.33□□□□□ -0.12
SNX4-201ENST00000251775 C9orf47Q6ZRZ4 202 aa14.33□□□□□ -0.12
SNX4-201ENST00000251775 ZFHX3Q15911 3703 aa14.33□□□□□ -0.12
SNX4-201ENST00000251775 TMEM238LA0A1B0GVL6 79 aa14.33□□□□□ -0.12
SNX4-201ENST00000251775 A6NJY4 79 aa14.33□□□□□ -0.12
SNX4-201ENST00000251775 COX6B1P14854 86 aa14.33□□□□□ -0.12
SNX4-201ENST00000251775 PRR9Q5T870 116 aa14.33□□□□□ -0.12
SNX4-201ENST00000251775 MT-ATP8P03928 68 aa14.32□□□□□ -0.12
SNX4-201ENST00000251775 SPINK8P0C7L1 97 aa14.32□□□□□ -0.12
SNX4-201ENST00000251775 CRYBA4P53673 196 aa14.32□□□□□ -0.12
SNX4-201ENST00000251775 UBE2D3P61077 147 aa14.32□□□□□ -0.12
SNX4-201ENST00000251775 UBE2D2P62837 147 aa14.32□□□□□ -0.12
SNX4-201ENST00000251775 ZNF418Q8TF45 676 aaPredicted RBP14.32□□□□□ -0.12
SNX4-201ENST00000251775 GLMPQ8WWB7 406 aa14.32□□□□□ -0.12
SNX4-201ENST00000251775 RPL39LQ96EH5 51 aaKnown RBP14.32□□□□□ -0.12
SNX4-201ENST00000251775 PIMREGQ9BSJ6 248 aa14.32□□□□□ -0.12
SNX4-201ENST00000251775 LOC107984156A0A0G2JMH3 177 aa14.32□□□□□ -0.12
SNX4-201ENST00000251775 PRSS29PA6NIE9 313 aa14.32□□□□□ -0.12
SNX4-201ENST00000251775 SCGB1D4Q6XE38 83 aa14.32□□□□□ -0.12
SNX4-201ENST00000251775 ARL17AQ8IVW1 177 aa14.32□□□□□ -0.12
SNX4-201ENST00000251775 PTH2Q96A98 100 aa14.32□□□□□ -0.12
SNX4-201ENST00000251775 RNF223E7ERA6 249 aa14.31□□□□□ -0.12
SNX4-201ENST00000251775 SPRY2O43597 315 aa14.31□□□□□ -0.12
SNX4-201ENST00000251775 IGHV4-38-2P0DP08 117 aa14.31□□□□□ -0.12
SNX4-201ENST00000251775 C2orf66Q6UXQ4 117 aa14.31□□□□□ -0.12
SNX4-201ENST00000251775 MRPL53Q96EL3 112 aaKnown RBP14.31□□□□□ -0.12
SNX4-201ENST00000251775 CD7P09564 240 aa14.31□□□□□ -0.12
SNX4-201ENST00000251775 CRIP2P52943 208 aaPredicted RBP14.31□□□□□ -0.12
SNX4-201ENST00000251775 C10orf105Q8TEF2 133 aa14.31□□□□□ -0.12
SNX4-201ENST00000251775 CARD19Q96LW7 228 aa14.31□□□□□ -0.12
SNX4-201ENST00000251775 HIF1ANQ9NWT6 349 aa14.31□□□□□ -0.12
SNX4-201ENST00000251775 PKD1L2Q7Z442 2459 aa14.3□□□□□ -0.12
SNX4-201ENST00000251775 SRSF9Q13242 221 aaKnown RBP eCLIP14.3□□□□□ -0.12
SNX4-201ENST00000251775 CCL19Q99731 98 aa14.3□□□□□ -0.12
SNX4-201ENST00000251775 FAM223BA6NKX1 122 aa14.3□□□□□ -0.12
SNX4-201ENST00000251775 XGP55808 180 aa14.3□□□□□ -0.12
SNX4-201ENST00000251775 Q6ZUT4 128 aa14.3□□□□□ -0.12
SNX4-201ENST00000251775 FAM223AQ8IWN6 122 aa14.3□□□□□ -0.12
SNX4-201ENST00000251775 KLHL30-AS1Q8NEE0 82 aa14.3□□□□□ -0.12
SNX4-201ENST00000251775 M0R381 172 aa14.29□□□□□ -0.12
SNX4-201ENST00000251775 TRBV12-3P01733 135 aa14.29□□□□□ -0.12
SNX4-201ENST00000251775 LY6EQ16553 131 aa14.29□□□□□ -0.12
SNX4-201ENST00000251775 IGF1P05019 195 aa14.29□□□□□ -0.12
SNX4-201ENST00000251775 ARL3P36405 182 aa14.28□□□□□ -0.12
SNX4-201ENST00000251775 CELSR1Q9NYQ6 3014 aa14.27□□□□□ -0.12
SNX4-201ENST00000251775 CRYGDP07320 174 aa14.27□□□□□ -0.13
SNX4-201ENST00000251775 UNQ9165/PRO28630Q6UXU0 137 aa14.27□□□□□ -0.13
SNX4-201ENST00000251775 C14orf178Q8N769 122 aaPredicted RBP14.27□□□□□ -0.13
SNX4-201ENST00000251775 PPDPFLQ8WWR9 84 aa14.27□□□□□ -0.13
SNX4-201ENST00000251775 IGHV4-30-2A0A087WSY4 118 aa14.26□□□□□ -0.13
SNX4-201ENST00000251775 TEN1Q86WV5 123 aa14.26□□□□□ -0.13
SNX4-201ENST00000251775 NDUFA11Q86Y39 141 aa14.26□□□□□ -0.13
SNX4-201ENST00000251775 DPH3P1Q9H4G8 78 aa14.26□□□□□ -0.13
SNX4-201ENST00000251775 TCL1BO95988 128 aa14.26□□□□□ -0.13
SNX4-201ENST00000251775 J3KRW8 73 aa14.25□□□□□ -0.13
SNX4-201ENST00000251775 C16orf92Q96LL3 132 aa14.25□□□□□ -0.13
SNX4-201ENST00000251775 A0A0J9YY99 117 aa14.25□□□□□ -0.13
SNX4-201ENST00000251775 H3BUX3 64 aa14.25□□□□□ -0.13
SNX4-201ENST00000251775 ATP5J2P56134 94 aa14.25□□□□□ -0.13
SNX4-201ENST00000251775 C20orf173Q96LM9 149 aa14.25□□□□□ -0.13
SNX4-201ENST00000251775 VPS13CQ709C8 3753 aa14.25□□□□□ -0.13
SNX4-201ENST00000251775 C11orf86A6NJI1 115 aa14.24□□□□□ -0.13
SNX4-201ENST00000251775 DUSP14O95147 198 aaKnown RBP14.24□□□□□ -0.13
SNX4-201ENST00000251775 SBSPONQ8IVN8 264 aa14.24□□□□□ -0.13
SNX4-201ENST00000251775 IGLV4-69A0A075B6H9 119 aa14.23□□□□□ -0.13
SNX4-201ENST00000251775 A6NDX4 124 aa14.23□□□□□ -0.13
SNX4-201ENST00000251775 IGHG2P01859 326 aa14.23□□□□□ -0.13
SNX4-201ENST00000251775 MGPP08493 103 aa14.23□□□□□ -0.13
SNX4-201ENST00000251775 LYRM7Q5U5X0 104 aa14.23□□□□□ -0.13
SNX4-201ENST00000251775 Q6ZS46 218 aa14.23□□□□□ -0.13
SNX4-201ENST00000251775 GPHB5Q86YW7 130 aa14.23□□□□□ -0.13
SNX4-201ENST00000251775 SPG11Q96JI7 2443 aa14.23□□□□□ -0.13
SNX4-201ENST00000251775 TSHBP01222 138 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms