RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 RNF152Q8N8N0 203 aa16.21■□□□□ 0.18
CLN6-201ENST00000249806 WFDC11Q8NEX6 87 aa16.21■□□□□ 0.18
CLN6-201ENST00000249806 TRAV12-3A0A0B4J271 114 aa16.2■□□□□ 0.18
CLN6-201ENST00000249806 K7EQG2 157 aa16.2■□□□□ 0.18
CLN6-201ENST00000249806 SNRPD3P62318 126 aaKnown RBP16.19■□□□□ 0.18
CLN6-201ENST00000249806 FLNAP21333 2647 aaKnown RBP16.19■□□□□ 0.18
CLN6-201ENST00000249806 DKK2Q9UBU2 259 aa16.19■□□□□ 0.18
CLN6-201ENST00000249806 PRSS47A8MTI9 375 aa16.18■□□□□ 0.18
CLN6-201ENST00000249806 ZNF25P17030 456 aaPredicted RBP16.18■□□□□ 0.18
CLN6-201ENST00000249806 SLURP1P55000 103 aa16.18■□□□□ 0.18
CLN6-201ENST00000249806 TCTAP57738 103 aa16.18■□□□□ 0.18
CLN6-201ENST00000249806 HIST2H2BDQ6DRA6 164 aa16.18■□□□□ 0.18
CLN6-201ENST00000249806 FAM159AQ6UWV7 190 aa16.18■□□□□ 0.18
CLN6-201ENST00000249806 NF1P21359 2839 aa16.18■□□□□ 0.18
CLN6-201ENST00000249806 TRAV12-2A0A075B6T6 113 aa16.18■□□□□ 0.18
CLN6-201ENST00000249806 A0A0J9YX75 114 aa16.18■□□□□ 0.18
CLN6-201ENST00000249806 CD5LO43866 347 aa16.18■□□□□ 0.18
CLN6-201ENST00000249806 ANKRD39Q53RE8 183 aa16.18■□□□□ 0.18
CLN6-201ENST00000249806 ADAMTSL5Q6ZMM2 481 aa16.18■□□□□ 0.18
CLN6-201ENST00000249806 MRAP2Q96G30 205 aa16.18■□□□□ 0.18
CLN6-201ENST00000249806 MED14OSP0DP75 135 aa16.17■□□□□ 0.18
CLN6-201ENST00000249806 Q8N2B8 174 aa16.17■□□□□ 0.18
CLN6-201ENST00000249806 DPH3P1Q9H4G8 78 aa16.17■□□□□ 0.18
CLN6-201ENST00000249806 DEFB125Q8N687 156 aa16.17■□□□□ 0.18
CLN6-201ENST00000249806 RASL10AQ92737 203 aa16.16■□□□□ 0.18
CLN6-201ENST00000249806 DUX3Q96PT4 197 aa16.16■□□□□ 0.18
CLN6-201ENST00000249806 MGPP08493 103 aa16.15■□□□□ 0.18
CLN6-201ENST00000249806 LAGE3Q14657 143 aa16.15■□□□□ 0.18
CLN6-201ENST00000249806 TCTEX1D4Q5JR98 221 aa16.15■□□□□ 0.18
CLN6-201ENST00000249806 RPL39LQ96EH5 51 aaKnown RBP16.15■□□□□ 0.18
CLN6-201ENST00000249806 CD7P09564 240 aa16.15■□□□□ 0.18
CLN6-201ENST00000249806 SMIM17P0DL12 118 aa16.15■□□□□ 0.18
CLN6-201ENST00000249806 MPV17L2Q567V2 206 aa16.15■□□□□ 0.18
CLN6-201ENST00000249806 C7orf71A4D174 169 aa16.14■□□□□ 0.17
CLN6-201ENST00000249806 COX8AP10176 69 aa16.14■□□□□ 0.17
CLN6-201ENST00000249806 DPF1Q92782 380 aa16.14■□□□□ 0.17
CLN6-201ENST00000249806 PRSS1P07477 247 aa16.14■□□□□ 0.17
CLN6-201ENST00000249806 OR11H1Q8NG94 326 aa16.13■□□□□ 0.17
CLN6-201ENST00000249806 TMEM208Q9BTX3 173 aa16.13■□□□□ 0.17
CLN6-201ENST00000249806 JPT2Q9H910 190 aa16.13■□□□□ 0.17
CLN6-201ENST00000249806 SPINK13Q1W4C9 94 aa16.13■□□□□ 0.17
CLN6-201ENST00000249806 SMIM2Q9BVW6 85 aa16.13■□□□□ 0.17
CLN6-201ENST00000249806 NUDT3O95989 172 aa16.12■□□□□ 0.17
CLN6-201ENST00000249806 KHDC1LQ5JSQ8 128 aa16.12■□□□□ 0.17
CLN6-201ENST00000249806 AP1S3Q96PC3 154 aa16.12■□□□□ 0.17
CLN6-201ENST00000249806 PDZD2O15018 2839 aa16.12■□□□□ 0.17
CLN6-201ENST00000249806 SUMO2P61956 95 aaKnown RBP16.11■□□□□ 0.17
CLN6-201ENST00000249806 ODF1Q14990 250 aa16.11■□□□□ 0.17
CLN6-201ENST00000249806 Q6ZVH6 145 aa16.11■□□□□ 0.17
CLN6-201ENST00000249806 ODF3Q96PU9 254 aa16.11■□□□□ 0.17
CLN6-201ENST00000249806 ACANP16112 2415 aa16.11■□□□□ 0.17
CLN6-201ENST00000249806 ITPR2Q14571 2701 aa16.1■□□□□ 0.17
CLN6-201ENST00000249806 NXPH4O95158 308 aa16.1■□□□□ 0.17
CLN6-201ENST00000249806 FOXC2Q99958 501 aa16.1■□□□□ 0.17
CLN6-201ENST00000249806 KIF25-AS1Q9Y6Z4 181 aa16.1■□□□□ 0.17
CLN6-201ENST00000249806 LINC01619G3V211 115 aa16.1■□□□□ 0.17
CLN6-201ENST00000249806 CDKN1BP46527 198 aa16.1■□□□□ 0.17
CLN6-201ENST00000249806 MDFICQ9P1T7 246 aa16.1■□□□□ 0.17
CLN6-201ENST00000249806 FGF6P10767 208 aa16.09■□□□□ 0.17
CLN6-201ENST00000249806 LINC00315P59091 139 aa16.09■□□□□ 0.17
CLN6-201ENST00000249806 C2orf91Q6ZV80 131 aa16.09■□□□□ 0.17
CLN6-201ENST00000249806 HELZ2Q9BYK8 2649 aaKnown RBP16.08■□□□□ 0.17
CLN6-201ENST00000249806 OR1N2Q8NGR9 330 aa16.08■□□□□ 0.16
CLN6-201ENST00000249806 C20orf78Q9BR46 151 aa16.08■□□□□ 0.16
CLN6-201ENST00000249806 A0A087WWL8 130 aa16.07■□□□□ 0.16
CLN6-201ENST00000249806 Q6ZSV7 163 aa16.07■□□□□ 0.16
CLN6-201ENST00000249806 Q8N1Y9 231 aa16.07■□□□□ 0.16
CLN6-201ENST00000249806 ZMAT4Q9H898 229 aa16.07■□□□□ 0.16
CLN6-201ENST00000249806 IGHV3-16A0A0C4DH30 117 aa16.07■□□□□ 0.16
CLN6-201ENST00000249806 DLEU1O43261 78 aa16.07■□□□□ 0.16
CLN6-201ENST00000249806 FOXI2Q6ZQN5 318 aa16.07■□□□□ 0.16
CLN6-201ENST00000249806 C4orf3Q8WVX3 66 aa16.07■□□□□ 0.16
CLN6-201ENST00000249806 HHLA3Q9XRX5 114 aa16.07■□□□□ 0.16
CLN6-201ENST00000249806 ATP5LO75964 103 aa16.06■□□□□ 0.16
CLN6-201ENST00000249806 BVES-AS1Q5T3Y7 98 aa16.06■□□□□ 0.16
CLN6-201ENST00000249806 AMTNQ6UX39 209 aa16.06■□□□□ 0.16
CLN6-201ENST00000249806 OR9G4Q8NGQ1 327 aa16.06■□□□□ 0.16
CLN6-201ENST00000249806 DLX4Q92988 240 aaPredicted RBP16.06■□□□□ 0.16
CLN6-201ENST00000249806 KNCNA6PVL3 124 aa16.06■□□□□ 0.16
CLN6-201ENST00000249806 POM121L12Q8N7R1 296 aa16.06■□□□□ 0.16
CLN6-201ENST00000249806 KLHL30-AS1Q8NEE0 82 aa16.06■□□□□ 0.16
CLN6-201ENST00000249806 DNAJC9-AS1A6NH13 148 aa16.05■□□□□ 0.16
CLN6-201ENST00000249806 DUSP14O95147 198 aaKnown RBP16.05■□□□□ 0.16
CLN6-201ENST00000249806 NMUP48645 174 aa16.05■□□□□ 0.16
CLN6-201ENST00000249806 ZNF124Q15973 351 aa16.05■□□□□ 0.16
CLN6-201ENST00000249806 DEFB131AP59861 70 aa16.04■□□□□ 0.16
CLN6-201ENST00000249806 PCP2Q8IVA1 136 aa16.04■□□□□ 0.16
CLN6-201ENST00000249806 BOD1L2Q8IYS8 172 aa16.04■□□□□ 0.16
CLN6-201ENST00000249806 C9orf85Q96MD7 179 aa16.04■□□□□ 0.16
CLN6-201ENST00000249806 WNK1Q9H4A3 2382 aa16.04■□□□□ 0.16
CLN6-201ENST00000249806 SETD2Q9BYW2 2564 aaPredicted RBP16.04■□□□□ 0.16
CLN6-201ENST00000249806 IGHV1OR15-1A0A075B7D0 117 aa16.04■□□□□ 0.16
CLN6-201ENST00000249806 NPSP0C0P6 89 aa16.04■□□□□ 0.16
CLN6-201ENST00000249806 NEGR1Q7Z3B1 354 aa16.04■□□□□ 0.16
CLN6-201ENST00000249806 TMEM61Q8N0U2 210 aa16.04■□□□□ 0.16
CLN6-201ENST00000249806 TMEM86BQ8N661 226 aa16.04■□□□□ 0.16
CLN6-201ENST00000249806 IGKCP01834 107 aa16.03■□□□□ 0.16
CLN6-201ENST00000249806 ORMDL2Q53FV1 153 aa16.03■□□□□ 0.16
CLN6-201ENST00000249806 C11orf44Q8N8P7 122 aa16.03■□□□□ 0.16
CLN6-201ENST00000249806 DEFB104AQ8WTQ1 72 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms