RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 TRBV6-1A0A0K0K1D8 114 aa12.27□□□□□ -0.45
SIN3B-201ENST00000248054 PAX4O43316 350 aa12.27□□□□□ -0.45
SIN3B-201ENST00000248054 CITED1Q99966 193 aa12.27□□□□□ -0.45
SIN3B-201ENST00000248054 A0A087WWL8 130 aa12.27□□□□□ -0.45
SIN3B-201ENST00000248054 LOXL1Q08397 574 aaPredicted RBP12.27□□□□□ -0.45
SIN3B-201ENST00000248054 CPAMD8Q8IZJ3 1885 aa12.27□□□□□ -0.45
SIN3B-201ENST00000248054 A0A087WX48 190 aa12.27□□□□□ -0.45
SIN3B-201ENST00000248054 PRIMA1Q86XR5 153 aa12.27□□□□□ -0.45
SIN3B-201ENST00000248054 GAGE5Q13069 117 aa12.26□□□□□ -0.45
SIN3B-201ENST00000248054 GAGE6Q13070 117 aa12.26□□□□□ -0.45
SIN3B-201ENST00000248054 KLF12Q9Y4X4 402 aa12.26□□□□□ -0.45
SIN3B-201ENST00000248054 TNRC6AQ8NDV7 1962 aaKnown RBP12.26□□□□□ -0.45
SIN3B-201ENST00000248054 JPT2Q9H910 190 aa12.26□□□□□ -0.45
SIN3B-201ENST00000248054 C9JAW5 83 aa12.26□□□□□ -0.45
SIN3B-201ENST00000248054 NPYP01303 97 aa12.26□□□□□ -0.45
SIN3B-201ENST00000248054 LINC01545Q5VT33 79 aa12.26□□□□□ -0.45
SIN3B-201ENST00000248054 CEND1Q8N111 149 aa12.26□□□□□ -0.45
SIN3B-201ENST00000248054 E7EUB6 86 aa12.26□□□□□ -0.45
SIN3B-201ENST00000248054 K7EMT4 169 aa12.26□□□□□ -0.45
SIN3B-201ENST00000248054 IGF2BP2-AS1Q96M15 143 aa12.26□□□□□ -0.45
SIN3B-201ENST00000248054 BUB3O43684 328 aa12.25□□□□□ -0.45
SIN3B-201ENST00000248054 FOXI2Q6ZQN5 318 aa12.25□□□□□ -0.45
SIN3B-201ENST00000248054 ZNF493Q6ZR52 646 aa12.25□□□□□ -0.45
SIN3B-201ENST00000248054 C17orf77Q96MU5 243 aa12.25□□□□□ -0.45
SIN3B-201ENST00000248054 SPXQ9BT56 116 aa12.25□□□□□ -0.45
SIN3B-201ENST00000248054 SDHAF1A6NFY7 115 aa12.25□□□□□ -0.45
SIN3B-201ENST00000248054 TNFRSF13BO14836 293 aaPredicted RBP12.25□□□□□ -0.45
SIN3B-201ENST00000248054 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.25□□□□□ -0.452e-7■■■■□ 25.9
SIN3B-201ENST00000248054 EBI3Q14213 229 aa12.25□□□□□ -0.45
SIN3B-201ENST00000248054 C1orf159Q96HA4 380 aa12.25□□□□□ -0.45
SIN3B-201ENST00000248054 SMIM20Q8N5G0 67 aa12.24□□□□□ -0.45
SIN3B-201ENST00000248054 SS18Q15532 418 aa12.24□□□□□ -0.45
SIN3B-201ENST00000248054 C6orf226Q5I0X4 101 aa12.24□□□□□ -0.45
SIN3B-201ENST00000248054 GATD1Q8NB37 220 aa12.24□□□□□ -0.45
SIN3B-201ENST00000248054 IGHV3-73A0A0B4J1V6 119 aa12.24□□□□□ -0.45
SIN3B-201ENST00000248054 A0A0U1RRA0 63 aa12.24□□□□□ -0.45
SIN3B-201ENST00000248054 LY6LH3BQJ8 138 aa12.24□□□□□ -0.45
SIN3B-201ENST00000248054 ANXA2RQ3ZCQ2 193 aa12.24□□□□□ -0.45
SIN3B-201ENST00000248054 AGPAT4-IT1Q9H0P7 198 aa12.24□□□□□ -0.45
SIN3B-201ENST00000248054 A6NDX4 124 aa12.23□□□□□ -0.45
SIN3B-201ENST00000248054 H3BMM0 161 aa12.23□□□□□ -0.45
SIN3B-201ENST00000248054 CRYGBP07316 175 aa12.23□□□□□ -0.45
SIN3B-201ENST00000248054 HTN3P15516 51 aa12.23□□□□□ -0.45
SIN3B-201ENST00000248054 UBE2WQ96B02 151 aa12.23□□□□□ -0.45
SIN3B-201ENST00000248054 C19orf84I3L1E1 186 aa12.23□□□□□ -0.45
SIN3B-201ENST00000248054 MORN5Q5VZ52 161 aa12.23□□□□□ -0.45
SIN3B-201ENST00000248054 DYNAPQ8N1N2 210 aa12.23□□□□□ -0.45
SIN3B-201ENST00000248054 CFHR4Q92496 578 aa12.23□□□□□ -0.45
SIN3B-201ENST00000248054 MRPL35Q9NZE8 188 aaKnown RBP12.23□□□□□ -0.45
SIN3B-201ENST00000248054 HOXD3P31249 432 aaPredicted RBP12.23□□□□□ -0.45
SIN3B-201ENST00000248054 UBE2E2Q96LR5 201 aa12.23□□□□□ -0.45
SIN3B-201ENST00000248054 FANCD2OSQ96PS1 177 aa12.23□□□□□ -0.45
SIN3B-201ENST00000248054 SPINK13Q1W4C9 94 aa12.22□□□□□ -0.45
SIN3B-201ENST00000248054 RHOHQ15669 191 aa12.22□□□□□ -0.45
SIN3B-201ENST00000248054 BLCAPP62952 87 aa12.22□□□□□ -0.45
SIN3B-201ENST00000248054 C1orf229Q6ZS94 237 aaPredicted RBP12.21□□□□□ -0.45
SIN3B-201ENST00000248054 PRO1854Q9UHT4 67 aa12.21□□□□□ -0.45
SIN3B-201ENST00000248054 IGKV1D-37A0A075B6S9 117 aa12.21□□□□□ -0.45
SIN3B-201ENST00000248054 TRAV8-3A0A0A6YYJ7 113 aa12.21□□□□□ -0.45
SIN3B-201ENST00000248054 MRPL36Q9P0J6 103 aaKnown RBP12.21□□□□□ -0.45
SIN3B-201ENST00000248054 DKK2Q9UBU2 259 aa12.21□□□□□ -0.45
SIN3B-201ENST00000248054 FXYD2P54710 66 aa12.21□□□□□ -0.46
SIN3B-201ENST00000248054 UTF1Q5T230 341 aa12.21□□□□□ -0.46
SIN3B-201ENST00000248054 GPHB5Q86YW7 130 aa12.21□□□□□ -0.46
SIN3B-201ENST00000248054 AJUBAQ96IF1 538 aa12.2□□□□□ -0.46
SIN3B-201ENST00000248054 HLA-DMBP28068 263 aa12.2□□□□□ -0.46
SIN3B-201ENST00000248054 DPH3Q96FX2 82 aa12.2□□□□□ -0.46
SIN3B-201ENST00000248054 RPL35AP18077 110 aaKnown RBP12.2□□□□□ -0.46
SIN3B-201ENST00000248054 NPC2P61916 151 aa12.19□□□□□ -0.46
SIN3B-201ENST00000248054 TRAV13-1A0A0B4J241 112 aa12.19□□□□□ -0.46
SIN3B-201ENST00000248054 IGLL5B9A064 214 aa12.19□□□□□ -0.46
SIN3B-201ENST00000248054 C12orf74Q32Q52 190 aa12.19□□□□□ -0.46
SIN3B-201ENST00000248054 RNF152Q8N8N0 203 aa12.19□□□□□ -0.46
SIN3B-201ENST00000248054 SPAG8Q99932 426 aaPredicted RBP12.19□□□□□ -0.46
SIN3B-201ENST00000248054 MED13LQ71F56 2210 aa12.18□□□□□ -0.46
SIN3B-201ENST00000248054 GAGE12JA6NER3 117 aa12.18□□□□□ -0.46
SIN3B-201ENST00000248054 GAGE7O76087 117 aa12.18□□□□□ -0.46
SIN3B-201ENST00000248054 GAGE12FP0CL80 117 aa12.18□□□□□ -0.46
SIN3B-201ENST00000248054 GAGE12GP0CL81 117 aa12.18□□□□□ -0.46
SIN3B-201ENST00000248054 GAGE12IP0CL82 117 aa12.18□□□□□ -0.46
SIN3B-201ENST00000248054 GAGE4Q13068 117 aa12.18□□□□□ -0.46
SIN3B-201ENST00000248054 EGR2P11161 476 aaPredicted RBP12.18□□□□□ -0.46
SIN3B-201ENST00000248054 GDF5OSQ5U4N7 250 aa12.18□□□□□ -0.46
SIN3B-201ENST00000248054 BPTFQ12830 3046 aa12.18□□□□□ -0.46
SIN3B-201ENST00000248054 TRBV25-1A0A075B6N4 114 aa12.18□□□□□ -0.46
SIN3B-201ENST00000248054 J3QQQ9 107 aa12.17□□□□□ -0.46
SIN3B-201ENST00000248054 IGF1P05019 195 aa12.17□□□□□ -0.46
SIN3B-201ENST00000248054 NDUFA12Q9UI09 145 aa12.17□□□□□ -0.46
SIN3B-201ENST00000248054 ADAMTS20P59510 1910 aa12.17□□□□□ -0.46
SIN3B-201ENST00000248054 C9orf47Q6ZRZ4 202 aa12.17□□□□□ -0.46
SIN3B-201ENST00000248054 RNF183Q96D59 192 aa12.17□□□□□ -0.46
SIN3B-201ENST00000248054 LAMTOR3Q9UHA4 124 aa12.17□□□□□ -0.46
SIN3B-201ENST00000248054 HERVK_113P63121 156 aa12.16□□□□□ -0.46
SIN3B-201ENST00000248054 FAM208BQ5VWN6 2430 aa12.16□□□□□ -0.46
SIN3B-201ENST00000248054 SPANXCQ9NY87 97 aa12.16□□□□□ -0.46
SIN3B-201ENST00000248054 MKI67P46013 3256 aaKnown RBP12.16□□□□□ -0.46
SIN3B-201ENST00000248054 NRGNQ92686 78 aa12.16□□□□□ -0.46
SIN3B-201ENST00000248054 TTTY13Q9BZ97 58 aa12.16□□□□□ -0.46
SIN3B-201ENST00000248054 XCL2Q9UBD3 114 aa12.16□□□□□ -0.46
SIN3B-201ENST00000248054 CCL24O00175 119 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms